ATPB_YEAST - dbPTM
ATPB_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID ATPB_YEAST
UniProt AC P00830
Protein Name ATP synthase subunit beta, mitochondrial
Gene Name ATP2
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 511
Subcellular Localization Mitochondrion. Mitochondrion inner membrane. Peripheral membrane protein.
Protein Description Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Subunits alpha and beta form the catalytic core in F(1). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits..
Protein Sequence MVLPRLYTATSRAAFKAAKQSAPLLSTSWKRCMASAAQSTPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLAAEAN
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
27PhosphorylationQSAPLLSTSWKRCMA
HHHCCCCCCHHHHHH
38.2821440633
35PhosphorylationSWKRCMASAAQSTPI
CHHHHHHHHHHCCCC
9.3927214570
39PhosphorylationCMASAAQSTPITGKV
HHHHHHHCCCCCCCE
31.2721440633
40PhosphorylationMASAAQSTPITGKVT
HHHHHHCCCCCCCEE
13.4621440633
78AcetylationEIKTPQGKLVLEVAQ
CCCCCCCCCHHHHHH
30.1224489116
1082-HydroxyisobutyrylationEGLVRGEKVLDTGGP
CCEECCEEEECCCCC
51.42-
108AcetylationEGLVRGEKVLDTGGP
CCEECCEEEECCCCC
51.4224489116
112PhosphorylationRGEKVLDTGGPISVP
CCEEEECCCCCCCCC
39.6228889911
143AcetylationIDERGPIKSKLRKPI
CCCCCCCCHHCCCCC
44.6724489116
148AcetylationPIKSKLRKPIHADPP
CCCHHCCCCCCCCCC
59.7824489116
196MethylationFGGAGVGKTVFIQEL
ECCCCCCHHHHHHHH
38.8320137074
235SuccinylationNDLYREMKETGVINL
CHHHHHHHHHCCEEE
47.5823954790
235AcetylationNDLYREMKETGVINL
CHHHHHHHHHCCEEE
47.5824489116
237PhosphorylationLYREMKETGVINLEG
HHHHHHHHCCEEEEC
31.0928889911
310PhosphorylationALLGRIPSAVGYQPT
HHHCCCCCCCCCCCC
32.9629734811
314PhosphorylationRIPSAVGYQPTLATD
CCCCCCCCCCCCCCC
12.5330377154
317PhosphorylationSAVGYQPTLATDMGL
CCCCCCCCCCCCHHH
17.3130377154
334MethylationERITTTKKGSVTSVQ
HHHCCCCCCCEEEEE
55.0919918266
373PhosphorylationTVLSRGISELGIYPA
HHHHCCHHHCCCCCC
29.5928889911
387AcetylationAVDPLDSKSRLLDAA
CCCCCCCCCHHHHHH
38.9824489116
406AcetylationEHYDVASKVQETLQT
HHHHHHHHHHHHHHH
37.8924489116
416PhosphorylationETLQTYKSLQDIIAI
HHHHHHHHHHHHHHH
22.3522369663
430PhosphorylationILGMDELSEQDKLTV
HHCCHHCCHHCCHHH
31.0322369663
434UbiquitinationDELSEQDKLTVERAR
HHCCHHCCHHHHHHH
45.8323749301
4682-HydroxyisobutyrylationPGKLVRLKDTVASFK
CCCEEEHHHHHHHHH
40.57-
475AcetylationKDTVASFKAVLEGKY
HHHHHHHHHHHCCCC
34.7824489116
481AcetylationFKAVLEGKYDNIPEH
HHHHHCCCCCCCCCH
39.8024489116
505SuccinylationDVVAKAEKLAAEAN-
HHHHHHHHHHHHCC-
48.5723954790

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of ATPB_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of ATPB_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of ATPB_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
ATPA_YEASTATP1physical
16554755
HSC82_YEASTHSC82physical
16554755
HSP82_YEASTHSP82physical
16554755
PEX6_YEASTPEX6genetic
17465979
COX2_YEASTCOX2physical
18819926
COX3_YEASTCOX3physical
18819926
ATPO_YEASTATP5physical
18937496
ATP5E_YEASTATP15physical
18937496
ATPD_YEASTATP16physical
18937496
ATP14_YEASTATP14physical
18937496
ATPK_YEASTATP17physical
18937496
ATP7_YEASTATP7physical
18937496
ATPF_YEASTATP4physical
18937496
ATPG_YEASTATP3physical
18937496
ATPA_YEASTATP1physical
18937496
ATP8_YEASTATP8physical
18937496
ATPO_YEASTATP5physical
15581895
ATP5E_YEASTATP15physical
15581895
ATPD_YEASTATP16physical
15581895
ATP14_YEASTATP14physical
15581895
ATPK_YEASTATP17physical
15581895
ATP7_YEASTATP7physical
15581895
ATPF_YEASTATP4physical
15581895
ATPG_YEASTATP3physical
15581895
ATPA_YEASTATP1physical
15581895
ATP6_YEASTATP6physical
15581895
ATP6_YEASTATP6physical
18937496
ATP6_YEASTATP6physical
18722382
ATPO_YEASTATP5physical
18722382
ATP5E_YEASTATP15physical
18722382
ATPD_YEASTATP16physical
18722382
ATP14_YEASTATP14physical
18722382
ATPK_YEASTATP17physical
18722382
ATP7_YEASTATP7physical
18722382
ATPF_YEASTATP4physical
18722382
ATPG_YEASTATP3physical
18722382
ATPA_YEASTATP1physical
18722382
ATP8_YEASTATP8physical
18722382
YJV8_YEASTYJL218Wphysical
18719252
PRS6B_YEASTRPT3genetic
21439406
COQ3_YEASTCOQ3genetic
21623372
COX6_YEASTCOX6genetic
21623372
FABG_YEASTOAR1genetic
21623372
ATPF_YEASTATP4genetic
21623372
ATPO_YEASTATP5genetic
21623372
ATP14_YEASTATP14genetic
21623372
QCR9_YEASTQCR9genetic
21623372
ATPA_YEASTATP1genetic
21623372
QCR6_YEASTQCR6genetic
21623372
ATP5E_YEASTATP15genetic
21623372
PHSG_YEASTGPH1genetic
21623372
QCR1_YEASTCOR1genetic
21623372
PFKA1_YEASTPFK1genetic
21623372
PPT2_YEASTPPT2genetic
21623372
QCR8_YEASTQCR8genetic
21623372
ATPA_YEASTATP1physical
21748405
ATPD_YEASTATP16physical
21748405
ATP5E_YEASTATP15physical
21748405
ATPG_YEASTATP3physical
21748405
ATPK_YEASTATP17physical
21748405
ATP14_YEASTATP14physical
21748405
ATPO_YEASTATP5physical
21748405
ATPF_YEASTATP4physical
21748405
ATP7_YEASTATP7physical
21748405
ATP6_YEASTATP6physical
21748405
ATP18_YEASTATP18physical
21748405
TAP42_YEASTTAP42genetic
24474773
PP11_YEASTSIT4genetic
24474773
PP2A1_YEASTPPH21genetic
24474773
PP2A2_YEASTPPH22genetic
24474773
SNF1_YEASTSNF1genetic
24474773
MIG1_YEASTMIG1genetic
24474773
2A5D_YEASTRTS1genetic
24474773
2ABA_YEASTCDC55genetic
24474773
SA155_YEASTSAP155genetic
24474773
SA190_YEASTSAP190genetic
24474773
SA185_YEASTSAP185genetic
24474773
OMS1_YEASTOMS1genetic
27708008
AEP2_YEASTAEP2genetic
27708008
ATP23_YEASTATP23genetic
27708008
FUMH_YEASTFUM1genetic
27708008
THP3_YEASTTHP3genetic
27708008
MSS18_YEASTMSS18genetic
27708008
IPYR_YEASTIPP1genetic
27708008
PRP6_YEASTPRP6genetic
27708008
MAK5_YEASTMAK5genetic
27708008
POP7_YEASTPOP7genetic
27708008
CDC10_YEASTCDC10genetic
27708008
RSC6_YEASTRSC6genetic
27708008
TECR_YEASTTSC13genetic
27708008
CCA1_YEASTCCA1genetic
27708008
YPT1_YEASTYPT1genetic
27708008
ACT_YEASTACT1genetic
27708008
PSB7_YEASTPRE4genetic
27708008
CDC20_YEASTCDC20genetic
27708008
SMD1_YEASTSMD1genetic
27708008
TAF1_YEASTTAF1genetic
27708008
MPPA_YEASTMAS2genetic
27708008
MED6_YEASTMED6genetic
27708008
NU192_YEASTNUP192genetic
27708008
TIM16_YEASTPAM16genetic
27708008
ERG27_YEASTERG27genetic
27708008
SEC22_YEASTSEC22genetic
27708008
CDC3_YEASTCDC3genetic
27708008
AFG2_YEASTAFG2genetic
27708008
PSA4_YEASTPRE6genetic
27708008
CH10_YEASTHSP10genetic
27708008
PROF_YEASTPFY1genetic
27708008
PSB2_YEASTPUP1genetic
27708008
GRPE_YEASTMGE1genetic
27708008
PSA7_YEASTPRE10genetic
27708008
SRP54_YEASTSRP54genetic
27708008
PSB5_YEASTPRE2genetic
27708008
MDM10_YEASTMDM10genetic
27708008
GEM1_YEASTGEM1genetic
27708008
TPS1_YEASTTPS1genetic
27708008
RIM1_YEASTRIM1genetic
27708008
PP2C1_YEASTPTC1genetic
27708008
YD056_YEASTYDR056Cgenetic
27708008
VPS41_YEASTVPS41genetic
27708008
INO2_YEASTINO2genetic
27708008
BCS1_YEASTBCS1genetic
27708008
SHE9_YEASTSHE9genetic
27708008
CYM1_YEASTCYM1genetic
27708008
RL27B_YEASTRPL27Bgenetic
27708008
PEX29_YEASTPEX29genetic
27708008
MZM1_YEASTMZM1genetic
27708008
PT122_YEASTPET122genetic
27708008
BLM10_YEASTBLM10genetic
27708008
QCR6_YEASTQCR6genetic
27708008
CGR1_YEASTCGR1genetic
27708008
MDM34_YEASTMDM34genetic
27708008
CHO2_YEASTCHO2genetic
27708008
CBP4_YEASTCBP4genetic
27708008
PHB2_YEASTPHB2genetic
27708008
OCA5_YEASTOCA5genetic
27708008
FIS1_YEASTFIS1genetic
27708008
ICE2_YEASTICE2genetic
27708008
VPS53_YEASTVPS53genetic
27708008
CYT2_YEASTCYT2genetic
27708008
CBT1_YEASTCBT1genetic
27708008
DBP7_YEASTDBP7genetic
27708008
MMM1_YEASTMMM1genetic
27708008
CSF1_YEASTCSF1genetic
27708008
MMR1_YEASTMMR1genetic
27708008
PEX30_YEASTPEX30genetic
27708008
GSF2_YEASTGSF2genetic
27708008
SAM37_YEASTSAM37genetic
27708008
PFKA2_YEASTPFK2genetic
27708008
COX7_YEASTCOX7genetic
27708008
PUB1_YEASTPUB1genetic
27708008
TPM1_YEASTTPM1genetic
27708008
SWS2_YEASTSWS2genetic
27708008
LSM7_YEASTLSM7genetic
27708008
COQ2_YEASTCOQ2genetic
27708008
MDM12_YEASTMDM12genetic
27708008
HMI1_YEASTHMI1genetic
27708008
CY1_YEASTCYT1genetic
27708008
VAM3_YEASTVAM3genetic
27708008
COQ7_YEASTCAT5genetic
27708008
SFL1_YEASTSFL1genetic
27708008
PTP2_YEASTPTP2genetic
27708008
PET20_YEASTPET20genetic
27708008
COX10_YEASTCOX10genetic
27708008
QCR2_YEASTQCR2genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of ATPB_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"Profiling phosphoproteins of yeast mitochondria reveals a role ofphosphorylation in assembly of the ATP synthase.";
Reinders J., Wagner K., Zahedi R.P., Stojanovski D., Eyrich B.,van der Laan M., Rehling P., Sickmann A., Pfanner N., Meisinger C.;
Mol. Cell. Proteomics 6:1896-1906(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-112; THR-237 ANDSER-373, AND MASS SPECTROMETRY.

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