DPH5_YEAST - dbPTM
DPH5_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID DPH5_YEAST
UniProt AC P32469
Protein Name Diphthine methyl ester synthase
Gene Name DPH5
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 300
Subcellular Localization Cytoplasm .
Protein Description S-adenosyl-L-methionine-dependent methyltransferase that catalyzes four methylations of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine methyl ester. The four successive methylation reactions represent the second step of diphthamide biosynthesis..
Protein Sequence MLYLIGLGLSYKSDITVRGLEAIKKCSRVYLEHYTSILMAASQEELESYYGKEIILADRELVETGSKQILNNADKEDVAFLVVGDPFGATTHTDLVLRAKREAIPVEIIHNASVMNAVGACGLQLYNFGQTVSMVFFTDNWRPDSWYDKIWENRKIGLHTLVLLDIKVKEQSIENMARGRLIYEPPRYMSIAQCCEQLLEIEEKRGTKAYTPDTPAVAISRLGSSSQSFKSGTISELANYDSGEPLHSLVILGRQCHELELEYLLEFADDKEKFGKDVANDQEYFKPAAWVPPTEDDSDE
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
3Phosphorylation-----MLYLIGLGLS
-----CEEEEECCCC
8.5828889911
1692-HydroxyisobutyrylationVLLDIKVKEQSIENM
EEEEEEECHHHHHHH
45.06-
172PhosphorylationDIKVKEQSIENMARG
EEEECHHHHHHHHCC
32.7225752575
208UbiquitinationIEEKRGTKAYTPDTP
HHHHHCCCCCCCCCC
42.0723749301
211PhosphorylationKRGTKAYTPDTPAVA
HHCCCCCCCCCCCEE
21.3925752575
224PhosphorylationVAISRLGSSSQSFKS
EEEHHCCCCCCCCCC
31.2622369663
225PhosphorylationAISRLGSSSQSFKSG
EEHHCCCCCCCCCCC
30.5122369663
226PhosphorylationISRLGSSSQSFKSGT
EHHCCCCCCCCCCCC
31.3822369663
228PhosphorylationRLGSSSQSFKSGTIS
HCCCCCCCCCCCCHH
36.2722369663
284PhosphorylationDVANDQEYFKPAAWV
CCCCCCCCCCCCCCC
15.9822369663
294PhosphorylationPAAWVPPTEDDSDE-
CCCCCCCCCCCCCC-
46.0722369663
298PhosphorylationVPPTEDDSDE-----
CCCCCCCCCC-----
56.8322369663

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of DPH5_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of DPH5_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of DPH5_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
MPPA_YEASTMAS2physical
16429126
DPH5_YEASTDPH5physical
18467557
NUP60_YEASTNUP60genetic
20093466
RS8A_YEASTRPS8Agenetic
20093466
RS8B_YEASTRPS8Agenetic
20093466
POA1_YEASTPOA1genetic
20093466
RS6A_YEASTRPS6Bgenetic
20093466
RS6B_YEASTRPS6Bgenetic
20093466
STE50_YEASTSTE50genetic
20093466
SGF29_YEASTSGF29genetic
20093466
SNT1_YEASTSNT1genetic
20093466
CYK3_YEASTCYK3genetic
20093466
RL13A_YEASTRPL13Agenetic
20093466
THI3_YEASTTHI3genetic
20093466
PAA1_YEASTPAA1genetic
20093466
LSM6_YEASTLSM6genetic
20093466
EF2_YEASTEFT2genetic
20093466
SLX8_YEASTSLX8genetic
20093466
RS26B_YEASTRPS26Bgenetic
20093466
CHAC_YEASTGCG1genetic
20093466
BMH1_YEASTBMH1genetic
20093466
PUS2_YEASTPUS2genetic
20093466
PALF_YEASTRIM8genetic
20093466
RL24A_YEASTRPL24Agenetic
20093466
SLX9_YEASTSLX9genetic
20093466
RS23A_YEASTRPS23Agenetic
20093466
RS23B_YEASTRPS23Agenetic
20093466
RSSA1_YEASTRPS0Agenetic
20093466
ERV29_YEASTERV29genetic
20093466
RS27B_YEASTRPS27Bgenetic
20093466
IMPX_YEASTIMP2genetic
20093466
RL16A_YEASTRPL16Agenetic
20093466
FMC1_YEASTFMC1genetic
20093466
LSM1_YEASTLSM1genetic
20093466
CYP7_YEASTCPR7genetic
20093466
RM49_YEASTMRP49genetic
20093466
IXR1_YEASTIXR1genetic
20093466
SIS2_YEASTSIS2genetic
20093466
FKS1_YEASTFKS1genetic
20093466
ROM2_YEASTROM2genetic
20093466
VID22_YEASTVID22genetic
20093466
RS29A_YEASTRPS29Agenetic
20093466
MSC1_YEASTMSC1genetic
20093466
SRC1_YEASTSRC1genetic
20093466
RSF1_YEASTRSF1genetic
20093466
MLH1_YEASTMLH1genetic
20093466
PFKA2_YEASTPFK2genetic
20093466
EOS1_YEASTEOS1genetic
20093466
MAS5_YEASTYDJ1genetic
20093466
FAP1_YEASTFAP1genetic
20093466
INO4_YEASTINO4genetic
20093466
IRA2_YEASTIRA2genetic
20093466
SIL1_YEASTSIL1genetic
20093466
SIN3_YEASTSIN3genetic
20093466
BUB3_YEASTBUB3genetic
20093466
VAM10_YEASTVAM10genetic
20093466
SUCA_YEASTLSC1genetic
20093466
PUS7_YEASTPUS7genetic
20093466
DGK1_YEASTDGK1genetic
20093466
RU2A_YEASTLEA1genetic
20093466
PUS1_YEASTPUS1genetic
20093466
HSP7F_YEASTSSE1genetic
20093466
RL21B_YEASTRPL21Bgenetic
20093466
YP034_YEASTYPL034Wgenetic
20093466
AP1G1_YEASTAPL4genetic
20093466
YP097_YEASTYPR097Wgenetic
20093466
THDH_YEASTILV1genetic
21623372
GGPPS_YEASTBTS1genetic
21623372
DPH5_YEASTDPH5physical
22615397
EF2_YEASTEFT2physical
23468660
SMD1_YEASTSMD1genetic
27708008
INO4_YEASTINO4genetic
27708008
AAR2_YEASTAAR2genetic
27708008
CND2_YEASTBRN1genetic
27708008
TAF5_YEASTTAF5genetic
27708008
CDC13_YEASTCDC13genetic
27708008
FAL1_YEASTFAL1genetic
27708008
PRS8_YEASTRPT6genetic
27708008
CDC20_YEASTCDC20genetic
27708008
SPT16_YEASTSPT16genetic
27708008
PTI1_YEASTPTI1genetic
27708008
MPPA_YEASTMAS2genetic
27708008
CDC11_YEASTCDC11genetic
27708008
RRP5_YEASTRRP5genetic
27708008
RNA1_YEASTRNA1genetic
27708008
LIP1_YEASTLIP1genetic
27708008
TIM23_YEASTTIM23genetic
27708008
CLP1_YEASTCLP1genetic
27708008
SEC16_YEASTSEC16genetic
27708008
TCM62_YEASTTCM62genetic
27708008
RS6A_YEASTRPS6Bgenetic
27708008
RS6B_YEASTRPS6Bgenetic
27708008
SGF29_YEASTSGF29genetic
27708008
STE50_YEASTSTE50genetic
27708008
RV161_YEASTRVS161genetic
27708008
THI3_YEASTTHI3genetic
27708008
CYK3_YEASTCYK3genetic
27708008
LSM6_YEASTLSM6genetic
27708008
RLA4_YEASTRPP2Bgenetic
27708008
EF2_YEASTEFT2genetic
27708008
SLX8_YEASTSLX8genetic
27708008
RS26B_YEASTRPS26Bgenetic
27708008
BMH1_YEASTBMH1genetic
27708008
RIM15_YEASTRIM15genetic
27708008
TFS2_YEASTDST1genetic
27708008
CTU1_YEASTNCS6genetic
27708008
ASK10_YEASTASK10genetic
27708008
RSSA1_YEASTRPS0Agenetic
27708008
GOSR1_YEASTGOS1genetic
27708008
MED20_YEASTSRB2genetic
27708008
YHK5_YEASTYHR045Wgenetic
27708008
TED1_YEASTTED1genetic
27708008
RL16A_YEASTRPL16Agenetic
27708008
IMPX_YEASTIMP2genetic
27708008
UBP12_YEASTUBP12genetic
27708008
CYP7_YEASTCPR7genetic
27708008
MRT4_YEASTMRT4genetic
27708008
RM49_YEASTMRP49genetic
27708008
SIS2_YEASTSIS2genetic
27708008
NU133_YEASTNUP133genetic
27708008
DNM1_YEASTDNM1genetic
27708008
SIC1_YEASTSIC1genetic
27708008
ROM2_YEASTROM2genetic
27708008
VID22_YEASTVID22genetic
27708008
RS29A_YEASTRPS29Agenetic
27708008
TSR2_YEASTTSR2genetic
27708008
SRC1_YEASTSRC1genetic
27708008
MSC1_YEASTMSC1genetic
27708008
RSF1_YEASTRSF1genetic
27708008
FAR3_YEASTFAR3genetic
27708008
PKR1_YEASTPKR1genetic
27708008
MLH1_YEASTMLH1genetic
27708008
PFKA2_YEASTPFK2genetic
27708008
FAP1_YEASTFAP1genetic
27708008
ADE_YEASTAAH1genetic
27708008
HOL1_YEASTHOL1genetic
27708008
SIL1_YEASTSIL1genetic
27708008
IRA2_YEASTIRA2genetic
27708008
ATG40_YEASTYOR152Cgenetic
27708008
MCA1_YEASTMCA1genetic
27708008
PUS7_YEASTPUS7genetic
27708008
RMI1_YEASTRMI1genetic
27708008
NACB1_YEASTEGD1genetic
27708008
HSP7F_YEASTSSE1genetic
27708008
PUS1_YEASTPUS1genetic
27708008
COG3_YEASTCOG3genetic
29674565
BUD14_YEASTBUD14genetic
29674565
KPC1_YEASTPKC1genetic
29674565
CSG2_YEASTCSG2genetic
29674565
CST26_YEASTCST26genetic
29674565
PDC2_YEASTPDC2genetic
29674565
TCPA_YEASTTCP1genetic
29674565
TRS23_YEASTTRS23genetic
29674565
EF2_YEASTEFT2genetic
29674565
GPI19_YEASTGPI19genetic
29674565
NBP35_YEASTNBP35genetic
29674565
DBF2_YEASTDBF2genetic
29674565
APQ12_YEASTAPQ12genetic
29674565
ATC7_YEASTNEO1genetic
29674565
EXO70_YEASTEXO70genetic
29674565
LSM1_YEASTLSM1genetic
29674565
CYP7_YEASTCPR7genetic
29674565
SA190_YEASTSAP190genetic
29674565
IMB1_YEASTKAP95genetic
29674565
VAC14_YEASTVAC14genetic
29674565
NU188_YEASTNUP188genetic
29674565
RRP5_YEASTRRP5genetic
29674565
PFD4_YEASTGIM3genetic
29674565
YP066_YEASTRGL1genetic
29674565
YAR1_YEASTYAR1genetic
29674565
MED1_YEASTMED1genetic
29674565
SPT2_YEASTSPT2genetic
29674565
YCH1_YEASTYCH1genetic
29674565
ARP4_YEASTARP4genetic
29674565
NAP1_YEASTNAP1genetic
29674565
ENT4_YEASTENT4genetic
29674565
OST6_YEASTOST6genetic
29674565

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of DPH5_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-172 AND SER-298, ANDMASS SPECTROMETRY.
"Large-scale phosphorylation analysis of alpha-factor-arrestedSaccharomyces cerevisiae.";
Li X., Gerber S.A., Rudner A.D., Beausoleil S.A., Haas W., Villen J.,Elias J.E., Gygi S.P.;
J. Proteome Res. 6:1190-1197(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-298, AND MASSSPECTROMETRY.

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