ARF_HUMAN - dbPTM
ARF_HUMAN - PTM Information in dbPTM
Basic Information of Protein
UniProt ID ARF_HUMAN
UniProt AC Q8N726
Protein Name Tumor suppressor ARF {ECO:0000305}
Gene Name CDKN2A {ECO:0000312|EMBL:AAM77919.1, ECO:0000312|HGNC:HGNC:1787}
Organism Homo sapiens (Human).
Sequence Length 132
Subcellular Localization Nucleus, nucleolus . Nucleus, nucleoplasm .
Isoform smARF: Mitochondrion .
Protein Description Capable of inducing cell cycle arrest in G1 and G2 phases. Acts as a tumor suppressor. Binds to MDM2 and blocks its nucleocytoplasmic shuttling by sequestering it in the nucleolus. This inhibits the oncogenic action of MDM2 by blocking MDM2-induced degradation of p53 and enhancing p53-dependent transactivation and apoptosis. Also induces G2 arrest and apoptosis in a p53-independent manner by preventing the activation of cyclin B1/CDC2 complexes. Binds to BCL6 and down-regulates BCL6-induced transcriptional repression. Binds to E2F1 and MYC and blocks their transcriptional activator activity but has no effect on MYC transcriptional repression. Binds to TOP1/TOPOI and stimulates its activity. This complex binds to rRNA gene promoters and may play a role in rRNA transcription and/or maturation. Interacts with NPM1/B23 and promotes its polyubiquitination and degradation, thus inhibiting rRNA processing. Interacts with COMMD1 and promotes its 'Lys63'-linked polyubiquitination. Interacts with UBE2I/UBC9 and enhances sumoylation of a number of its binding partners including MDM2 and E2F1. Binds to HUWE1 and represses its ubiquitin ligase activity. May play a role in controlling cell proliferation and apoptosis during mammary gland development. Isoform smARF may be involved in regulation of autophagy and caspase-independent cell death; the short-lived mitochondrial isoform is stabilized by C1QBP..
Protein Sequence MVRRFLVTLRIRRACGPPRVRVFVVHIPRLTGEWAAPGAPAAVALVLMLLRSQRLGQQPLPRRPGHDDGQRPSGGAAAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGAAPGRGAAGRARCLGPSARGPG
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
8PhosphorylationMVRRFLVTLRIRRAC
CCCHHHHHHHHHHHH
-
26 (in isoform 2)Phosphorylation-29632367
31PhosphorylationVVHIPRLTGEWAAPG
EEECCCCCCCCCCCC
-
45 (in isoform 2)Phosphorylation-23403867
73PhosphorylationHDDGQRPSGGAAAAP
CCCCCCCCCCCCCCC
29632367
92PhosphorylationQLRRPRHSHPTRARR
CCCCCCCCCCCCHHC
23403867
115MethylationAGGAAPGRGAAGRAR
CCCCCCCCCHHCCCC
-
120MethylationPGRGAAGRARCLGPS
CCCCHHCCCCCCCCC
-
122MethylationRGAAGRARCLGPSAR
CCHHCCCCCCCCCCC
-
129MethylationRCLGPSARGPG----
CCCCCCCCCCC----
-

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources
8TPhosphorylationKinasePRKCAP17252
GPS
-KUbiquitinationE3 ubiquitin ligaseSIVA1O15304
PMID:23462994
-KUbiquitinationE3 ubiquitin ligaseTRIP12Q14669
PMID:22199232
-KUbiquitinationE3 ubiquitin ligaseMKRN1Q9UHC7
PMID:23104211

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of ARF_HUMAN !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of ARF_HUMAN !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
CDK4_HUMANCDK4physical
8805225
CDK6_HUMANCDK6physical
8805225
CCND2_HUMANCCND2physical
15065884
CDK4_HUMANCDK4physical
15065884
RL11_HUMANRPL11physical
14612427
P53_HUMANTP53physical
14612427
MDM2_HUMANMDM2physical
14612427
CDK4_HUMANCDK4physical
10580009
SRTD1_HUMANSERTAD1physical
10580009
CCND1_HUMANCCND1physical
10580009
E4F1_HUMANE4F1physical
12446718
MDM2_HUMANMDM2physical
9529249
P53_HUMANTP53physical
9529249
CCNG1_HUMANCCNG1physical
12556559
MDM2_HUMANMDM2physical
12085228
NEB2_HUMANPPP1R9Bphysical
11278317
DAXX_HUMANDAXXphysical
18583933
TOP1_HUMANTOP1physical
15361825
PRS6A_HUMANPSMC3physical
17334400
SMCA4_HUMANSMARCA4physical
19149898
ING1_HUMANING1physical
19085961
KAT5_HUMANKAT5physical
16705183
TYY1_HUMANYY1physical
15210108
NPM_HUMANNPM1physical
16679321
TRIPC_HUMANTRIP12physical
20208519
MDM2_HUMANMDM2physical
21133853
NPM_HUMANNPM1physical
15989956
HUWE1_HUMANHUWE1physical
15989956
PCNA_HUMANPCNAphysical
17955473
MCM6_HUMANMCM6physical
17955473
UCHL1_HUMANUCHL1physical
20395212
P53_HUMANTP53physical
20395212
MDM2_HUMANMDM2physical
20395212
VHL_HUMANVHLphysical
21942715
SP1_HUMANSP1physical
21555589
CDK4_HUMANCDK4physical
9529249
CDK4_HUMANCDK4physical
10585280
PRS6A_HUMANPSMC3physical
14665636
ARFP2_HUMANARFIP2physical
11792819
GGA1_HUMANGGA1physical
11792819
WRN_HUMANWRNphysical
15355988
MDM2_HUMANMDM2physical
15355988
P63_HUMANTP63physical
15367673
NPM_HUMANNPM1physical
14636574
NUCL_HUMANNCLphysical
14636574
COMD1_HUMANCOMMD1physical
18305112
HUWE1_HUMANHUWE1physical
22561347
NPM_HUMANNPM1physical
22561347
TRIPC_HUMANTRIP12physical
22561347
TRADD_HUMANTRADDphysical
22561347
SENP3_HUMANSENP3physical
18948745
CDK4_HUMANCDK4physical
11900540
CCND2_HUMANCCND2physical
11900540
CK5P3_HUMANCDK5RAP3physical
16173922
MDM2_HUMANMDM2physical
16173922
CTBP2_HUMANCTBP2physical
16508011
PIAS2_HUMANPIAS2physical
20308430
MYC_HUMANMYCphysical
20308430
NPM_HUMANNPM1physical
20308430
MDM2_HUMANMDM2physical
17426254
MDM2_HUMANMDM2physical
10871849
BRCA1_HUMANBRCA1physical
18703154
IKKB_HUMANIKBKBphysical
20152798
GGA3_HUMANGGA3physical
21517092
NMI_HUMANNMIphysical
23034180
TRIPC_HUMANTRIP12physical
23034180
TAT_HV1H2tatphysical
18418067
MDM2_HUMANMDM2physical
18418067
CDK4_HUMANCDK4physical
10491434
CDK6_HUMANCDK6physical
10491434
ATR_HUMANATRphysical
15775976
MYCN_HUMANMYCNphysical
17289033
CDK4_HUMANCDK4physical
11556834
CDK6_HUMANCDK6physical
11556834
HIF1A_HUMANHIF1Aphysical
11382768
CARF_HUMANCDKN2AIPphysical
12581788
E2F1_HUMANE2F1physical
11314038
CDK6_HUMANCDK6physical
9380698
MDM2_HUMANMDM2physical
9653180
P53_HUMANTP53physical
9653180
EGR1_HUMANEGR1physical
19057511
EBNA5_EBVGEBNA-LPphysical
12740913
EBNA5_EBVB9EBNA-LPphysical
12740913
B3AT_HUMANSLC4A1physical
15811326
ZN420_HUMANZNF420physical
20713054
CDK6_HUMANCDK6physical
17909018
CDK4_HUMANCDK4physical
17909018
MDM2_HUMANMDM2physical
17909018
SIVA_HUMANSIVA1physical
23462994
CDK6_HUMANCDK6physical
15232106
CDK4_HUMANCDK4physical
15232106
ORC4_HUMANORC4physical
15232106
MCM2_HUMANMCM2physical
15232106
MK08_HUMANMAPK8physical
16007099
MK10_HUMANMAPK10physical
16007099
MDM2_HUMANMDM2physical
9724636
P53_HUMANTP53physical
9724636
DEAF1_HUMANDEAF1physical
21988832
TDRD7_HUMANTDRD7physical
21988832
CREL2_HUMANCRELD2physical
21988832
HNRPU_HUMANHNRNPUphysical
21988832
FINC_HUMANFN1physical
21988832
KPCA_HUMANPRKCAphysical
21988832
UBE4B_HUMANUBE4Bphysical
17955473
UBP26_HUMANUSP26physical
17955473
SNRPA_HUMANSNRPAphysical
17955473
TBA1C_HUMANTUBA1Cphysical
17955473
TBB4B_HUMANTUBB4Bphysical
17955473
TBA1A_HUMANTUBA1Aphysical
17955473
TBB5_HUMANTUBBphysical
17955473
GRP75_HUMANHSPA9physical
17955473
RSMB_HUMANSNRPBphysical
17955473
RUVB2_HUMANRUVBL2physical
17955473
RIN2_HUMANRIN2physical
17955473
PDCD6_HUMANPDCD6physical
17955473
MMRN1_HUMANMMRN1physical
17955473
ML12A_HUMANMYL12Aphysical
17955473
METH_HUMANMTRphysical
17955473
HNRPC_HUMANHNRNPCphysical
17955473
HSP74_HUMANHSPA4physical
17955473
HSP7C_HUMANHSPA8physical
17955473
HS90B_HUMANHSP90AB1physical
17955473
HS90A_HUMANHSP90AA1physical
17955473
G3P_HUMANGAPDHphysical
17955473
EPHA3_HUMANEPHA3physical
17955473
EF2_HUMANEEF2physical
17955473
CDK6_HUMANCDK6physical
17955473
ACLY_HUMANACLYphysical
17955473
ACTN4_HUMANACTN4physical
17955473
ACTG_HUMANACTG1physical
17955473
ACTB_HUMANACTBphysical
17955473
ROA2_HUMANHNRNPA2B1physical
17955473
BRK1_HUMANBRK1physical
22863883
LSM8_HUMANLSM8physical
22863883
NCKP1_HUMANNCKAP1physical
22863883
RPP38_HUMANRPP38physical
22863883
GNL3_HUMANGNL3physical
24769896
MDM2_HUMANMDM2physical
24769896
TRIPC_HUMANTRIP12physical
24769896
B2CL1_HUMANBCL2L1physical
19049976
GRP75_HUMANHSPA9physical
19049976
C1QBP_HUMANC1QBPphysical
19049976
MDM2_HUMANMDM2physical
19049976
BECN1_HUMANBECN1physical
19049976
MDM2_HUMANMDM2physical
12167711
ZN420_HUMANZNF420physical
25691462
ZBT17_HUMANZBTB17physical
19901969
ANGL4_HUMANANGPTL4physical
25640309
CASC3_HUMANCASC3physical
25640309
ARY2_HUMANNAT2physical
25640309
NSD3_HUMANWHSC1L1physical
25640309
TIF1B_HUMANTRIM28physical
26055329
PML_HUMANPMLphysical
26578773
UBC9_HUMANUBE2Iphysical
26578773
CDK4_HUMANCDK4physical
28042499
CCND1_HUMANCCND1physical
28042499
KAT2B_HUMANKAT2Bphysical
28042499
NOP53_HUMANGLTSCR2physical
27323397
TRIPC_HUMANTRIP12physical
27323397
RIR2_HUMANRRM2genetic
28319113
IGF1R_HUMANIGF1Rgenetic
28319113
PTEN_HUMANPTENgenetic
28319113
TOP1_HUMANTOP1physical
12673200
ANRA2_HUMANANKRA2physical
27229929
APRV1_HUMANASPRV1physical
27229929
AZIN1_HUMANAZIN1physical
27229929
APC15_HUMANANAPC15physical
27229929
ZGRF1_HUMANZGRF1physical
27229929
CCDB1_HUMANCCNDBP1physical
27229929
CENPA_HUMANCENPAphysical
27229929
EFHC2_HUMANEFHC2physical
27229929
EXOC2_HUMANEXOC2physical
27229929
GEMI_HUMANGMNNphysical
27229929
DOB_HUMANHLA-DOBphysical
27229929
MAF1_HUMANMAF1physical
27229929
TP4A3_HUMANPTP4A3physical
27229929
RBM26_HUMANRBM26physical
27229929
SIX2_HUMANSIX2physical
27229929
UBL7_HUMANUBL7physical
27229929
VAMP1_HUMANVAMP1physical
27229929
ZN687_HUMANZNF687physical
27229929
ZUFSP_HUMANZUFSPphysical
27229929
MDM2_HUMANMDM2physical
12630860

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of ARF_HUMAN

loading...

Related Literatures of Post-Translational Modification

TOP