EBP2_YEAST - dbPTM
EBP2_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID EBP2_YEAST
UniProt AC P36049
Protein Name rRNA-processing protein EBP2
Gene Name EBP2
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 427
Subcellular Localization Nucleus, nucleolus .
Protein Description Required for the processing of the 27S pre-rRNA. Probably involved in the step of the processing of the 27 SA precursor into the 27 SB intermediate..
Protein Sequence MAKGFKLKELLSHQKEIEKAEKLENDLKKKKSQELKKEEPTIVTASNLKKLEKKEKKADVKKEVAADTEEYQSQALSKKEKRKLKKELKKMQEQDATEAQKHMSGDEDESGDDREEEEEEEEEEEGRLDLEKLAKSDSESEDDSESENDSEEDEDVVAKEESEEKEEQEEEQDVPLSDVEFDSDADVVPHHKLTVNNTKAMKHALERVQLPWKKHSFQEHQSVTSETNTDEHIKDIYDDTERELAFYKQSLDAVLVARDELKRLKVPFKRPLDYFAEMVKSDEHMDKIKGKLIEEASDKKAREEARRQRQLKKFGKQVQNATLQKRQLEKRETLEKIKSLKNKRKHNEIDHSEFNVGVEEEVEGKRFDRGRPNGKRAAKNAKYGQGGMKRFKRKNDATSSADVSGFSSRKMKGKTNRPGKSRRARRF
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
8AcetylationMAKGFKLKELLSHQK
CCCCCCHHHHHHCHH
47.0825381059
19AcetylationSHQKEIEKAEKLEND
HCHHHHHHHHHHHHH
68.4625381059
22AcetylationKEIEKAEKLENDLKK
HHHHHHHHHHHHHHH
66.9925381059
32PhosphorylationNDLKKKKSQELKKEE
HHHHHHHHHHHHHHC
37.4521440633
36AcetylationKKKSQELKKEEPTIV
HHHHHHHHHHCCCEE
58.3424489116
36SumoylationKKKSQELKKEEPTIV
HHHHHHHHHHCCCEE
58.34-
37AcetylationKKSQELKKEEPTIVT
HHHHHHHHHCCCEEE
78.8024489116
61SumoylationKEKKADVKKEVAADT
HHHHHHHHHHHHCCH
43.70-
68PhosphorylationKKEVAADTEEYQSQA
HHHHHCCHHHHHHHH
26.4522369663
71PhosphorylationVAADTEEYQSQALSK
HHCCHHHHHHHHCCH
13.7722369663
73PhosphorylationADTEEYQSQALSKKE
CCHHHHHHHHCCHHH
19.2722369663
77PhosphorylationEYQSQALSKKEKRKL
HHHHHHCCHHHHHHH
44.7022369663
104PhosphorylationTEAQKHMSGDEDESG
HHHHHHHCCCCCCCC
42.6917330950
110PhosphorylationMSGDEDESGDDREEE
HCCCCCCCCCCHHHH
60.9017330950
136PhosphorylationDLEKLAKSDSESEDD
CHHHHHCCCCCCCCC
40.5419795423
138PhosphorylationEKLAKSDSESEDDSE
HHHHCCCCCCCCCCC
50.5419795423
140PhosphorylationLAKSDSESEDDSESE
HHCCCCCCCCCCCCC
50.7219795423
144PhosphorylationDSESEDDSESENDSE
CCCCCCCCCCCCCCH
56.1719795423
146PhosphorylationESEDDSESENDSEED
CCCCCCCCCCCCHHH
45.7319795423
150PhosphorylationDSESENDSEEDEDVV
CCCCCCCCHHHHHHH
55.2419795423
162PhosphorylationDVVAKEESEEKEEQE
HHHHHHHHHHHHHHH
52.7425704821
177PhosphorylationEEQDVPLSDVEFDSD
HHCCCCHHHCCCCCC
33.2722369663
183PhosphorylationLSDVEFDSDADVVPH
HHHCCCCCCCCCCCC
39.7622369663
198PhosphorylationHKLTVNNTKAMKHAL
CCCCCCCHHHHHHHH
18.2524909858
202AcetylationVNNTKAMKHALERVQ
CCCHHHHHHHHHHCC
30.5025381059
281PhosphorylationYFAEMVKSDEHMDKI
HHHHHHHCHHHHHHH
36.5028889911
297PhosphorylationGKLIEEASDKKAREE
HHHHHHHCHHHHHHH
53.9228152593
322PhosphorylationGKQVQNATLQKRQLE
HHHHHHHHHHHHHHH
36.9530377154
325AcetylationVQNATLQKRQLEKRE
HHHHHHHHHHHHHHH
45.2725381059
382AcetylationKRAAKNAKYGQGGMK
HHHHHHCCCCCCCHH
60.3425381059
389AcetylationKYGQGGMKRFKRKND
CCCCCCHHHHHCCCC
58.9425381059
398PhosphorylationFKRKNDATSSADVSG
HHCCCCCCCCCCCCC
26.5228889911
399PhosphorylationKRKNDATSSADVSGF
HCCCCCCCCCCCCCC
25.8323749301
400PhosphorylationRKNDATSSADVSGFS
CCCCCCCCCCCCCCC
24.9221551504
404PhosphorylationATSSADVSGFSSRKM
CCCCCCCCCCCCCCC
34.3721551504
407PhosphorylationSADVSGFSSRKMKGK
CCCCCCCCCCCCCCC
32.5328889911
408PhosphorylationADVSGFSSRKMKGKT
CCCCCCCCCCCCCCC
33.3928889911

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of EBP2_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of EBP2_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of EBP2_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
RGA2_YEASTRGA2physical
16554755
RRP14_YEASTRRP14physical
17804645
RRS1_YEASTRRS1physical
18467557
BRX1_YEASTBRX1physical
18467557
NOP4_YEASTNOP4physical
18467557
GIS2_YEASTGIS2physical
18467557
PWP1_YEASTPWP1physical
18467557
NOC2_YEASTNOC2physical
18467557
RRP12_YEASTRRP12physical
18467557
DBP2_YEASTDBP2physical
18467557
RLP7_YEASTRLP7physical
18467557
SIZ2_YEASTNFI1physical
18603780
WSS1_YEASTWSS1physical
18603780
ULS1_YEASTULS1physical
18603780
NOP12_YEASTNOP12physical
18603780
LOC1_YEASTLOC1physical
18603780
EBP2_YEASTEBP2physical
21822217
RRS1_YEASTRRS1physical
21822217
BRX1_YEASTBRX1genetic
22319211
BRX1_YEASTBRX1physical
22319211
RRS1_YEASTRRS1physical
22319211
LOC1_YEASTLOC1physical
22319211
DBP9_YEASTDBP9physical
22319211
NOP12_YEASTNOP12physical
22319211
RRP14_YEASTRRP14physical
22319211
BRX1_YEASTBRX1genetic
23470771
ARD1_YEASTARD1genetic
23470771
NAT1_YEASTNAT1genetic
23470771
RL36A_YEASTRPL36Agenetic
23470771
RL36B_YEASTRPL36Bgenetic
23470771
RLP7_YEASTRLP7physical
24129494
NOP16_YEASTNOP16genetic
24312670
RPF1_YEASTRPF1genetic
24312670
RIX7_YEASTRIX7genetic
24312670
RL36A_YEASTRPL36Agenetic
25119672
RL36B_YEASTRPL36Bgenetic
25119672
RL34A_YEASTRPL34Agenetic
25119672
RL34B_YEASTRPL34Bgenetic
25119672
RL8A_YEASTRPL8Aphysical
25119672
EBP2_YEASTEBP2physical
25877921
LOC1_YEASTLOC1physical
25877921
NOP4_YEASTNOP4physical
25877921
BRX1_YEASTBRX1physical
25877921
DBP10_YEASTDBP10physical
25877921
SMY2_YEASTSMY2genetic
25849478
SYH1_YEASTSYH1genetic
25849478
UTP5_YEASTUTP5genetic
27708008
DNA2_YEASTDNA2genetic
27708008
SED5_YEASTSED5genetic
27708008
BOS1_YEASTBOS1genetic
27708008
SGT1_YEASTSGT1genetic
27708008
RL17B_YEASTRPL17Bgenetic
27708008
HOC1_YEASTHOC1genetic
27708008
VPS21_YEASTVPS21genetic
27708008
KAR3_YEASTKAR3genetic
27708008
MAK16_YEASTMAK16genetic
27708008
CDC24_YEASTCDC24genetic
27708008
STU1_YEASTSTU1genetic
27708008
CDC27_YEASTCDC27genetic
27708008
KPC1_YEASTPKC1genetic
27708008
MAK5_YEASTMAK5genetic
27708008
APC11_YEASTAPC11genetic
27708008
CDC48_YEASTCDC48genetic
27708008
CDC53_YEASTCDC53genetic
27708008
GLE1_YEASTGLE1genetic
27708008
ERF3_YEASTSUP35genetic
27708008
TRS23_YEASTTRS23genetic
27708008
GPI8_YEASTGPI8genetic
27708008
RMRP_YEASTSNM1genetic
27708008
RSP5_YEASTRSP5genetic
27708008
MOB2_YEASTMOB2genetic
27708008
ALG2_YEASTALG2genetic
27708008
RRP41_YEASTSKI6genetic
27708008
RRP4_YEASTRRP4genetic
27708008
RPF1_YEASTRPF1genetic
27708008
FDFT_YEASTERG9genetic
27708008
TIM44_YEASTTIM44genetic
27708008
MTR4_YEASTMTR4genetic
27708008
CDC6_YEASTCDC6genetic
27708008
HSP77_YEASTSSC1genetic
27708008
PWP1_YEASTPWP1genetic
27708008
NOP56_YEASTNOP56genetic
27708008
MCM5_YEASTMCM5genetic
27708008
DBP9_YEASTDBP9genetic
27708008
IMB1_YEASTKAP95genetic
27708008
SEC65_YEASTSEC65genetic
27708008
HMCS_YEASTERG13genetic
27708008
ERO1_YEASTERO1genetic
27708008
SPC24_YEASTSPC24genetic
27708008
RRP5_YEASTRRP5genetic
27708008
HAS1_YEASTHAS1genetic
27708008
NOP2_YEASTNOP2genetic
27708008
DBP6_YEASTDBP6genetic
27708008
BRX1_YEASTBRX1genetic
27708008
PROF_YEASTPFY1genetic
27708008
DED1_YEASTDED1genetic
27708008
RPA1_YEASTRPA190genetic
27708008
NAB3_YEASTNAB3genetic
27708008
NIP7_YEASTNIP7genetic
27708008
SRP54_YEASTSRP54genetic
27708008
KIN3_YEASTKIN3genetic
27708008
RPN4_YEASTRPN4genetic
27708008
ACK1_YEASTACK1genetic
27708008
SWI5_YEASTSWI5genetic
27708008
DPP1_YEASTDPP1genetic
27708008
PSP1_YEASTPSP1genetic
27708008
GNP1_YEASTGNP1genetic
27708008
CGR1_YEASTCGR1genetic
27708008
MIG1_YEASTMIG1genetic
27708008
YGS6_YEASTYGL176Cgenetic
27708008
IMO32_YEASTIMO32genetic
27708008
SODM_YEASTSOD2genetic
27708008
SLT2_YEASTSLT2genetic
27708008
RL43A_YEASTRPL43Bgenetic
27708008
RL43B_YEASTRPL43Bgenetic
27708008
CSF1_YEASTCSF1genetic
27708008
FKS1_YEASTFKS1genetic
27708008
MRE11_YEASTMRE11genetic
27708008
YHM2_YEASTYHM2genetic
27708008
TMA23_YEASTTMA23genetic
27708008
MKT1_YEASTMKT1genetic
27708008
AF9_YEASTYAF9genetic
27708008
CYB5_YEASTCYB5genetic
27708008
SIL1_YEASTSIL1genetic
27708008
NOP12_YEASTNOP12genetic
27708008
RRP6_YEASTRRP6genetic
27708008
GYP1_YEASTGYP1genetic
27708008
SUCA_YEASTLSC1genetic
27708008
SWT1_YEASTSWT1genetic
27708008
PDE2_YEASTPDE2genetic
27708008
GGPPS_YEASTBTS1genetic
27708008
YP022_YEASTYPR022Cgenetic
27708008
ROX1_YEASTROX1genetic
27708008
YP078_YEASTYPR078Cgenetic
27708008
NOP4_YEASTNOP4physical
27077951

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of EBP2_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-104 AND SER-110, ANDMASS SPECTROMETRY.
"Analysis of phosphorylation sites on proteins from Saccharomycescerevisiae by electron transfer dissociation (ETD) massspectrometry.";
Chi A., Huttenhower C., Geer L.Y., Coon J.J., Syka J.E.P., Bai D.L.,Shabanowitz J., Burke D.J., Troyanskaya O.G., Hunt D.F.;
Proc. Natl. Acad. Sci. U.S.A. 104:2193-2198(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-177 AND SER-183, ANDMASS SPECTROMETRY.
"Large-scale phosphorylation analysis of alpha-factor-arrestedSaccharomyces cerevisiae.";
Li X., Gerber S.A., Rudner A.D., Beausoleil S.A., Haas W., Villen J.,Elias J.E., Gygi S.P.;
J. Proteome Res. 6:1190-1197(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-104; SER-110; SER-177AND SER-183, AND MASS SPECTROMETRY.

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