GAR1_YEAST - dbPTM
GAR1_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID GAR1_YEAST
UniProt AC P28007
Protein Name H/ACA ribonucleoprotein complex subunit GAR1
Gene Name GAR1
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 205
Subcellular Localization Nucleus, nucleolus .
Protein Description Non-catalytic component of the H/ACA small nucleolar ribonucleoprotein (H/ACA snoRNP), which catalyzes pseudouridylation of rRNA and is required for ribosome biogenesis. [PubMed: 9303321]
Protein Sequence MSFRGGNRGGRGGFRGGFRGGRTGSARSFQQGPPDTVLEMGAFLHPCEGDIVCRSINTKIPYFNAPIYLENKTQVGKVDEILGPLNEVFFTIKCGDGVQATSFKEGDKFYIAADKLLPIERFLPKPKVVGPPKPKNKKKRSGAPGGRGGASMGRGGSRGGFRGGRGGSSFRGGRGGSSFRGGSRGGSFRGGSRGGSRGGFRGGRR
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
4Methylation----MSFRGGNRGGR
----CCCCCCCCCCC
44.8112756332
4Asymmetric dimethylarginine----MSFRGGNRGGR
----CCCCCCCCCCC
44.81-
8Asymmetric dimethylarginineMSFRGGNRGGRGGFR
CCCCCCCCCCCCCCC
52.82-
8MethylationMSFRGGNRGGRGGFR
CCCCCCCCCCCCCCC
52.8212756332
11Asymmetric dimethylarginineRGGNRGGRGGFRGGF
CCCCCCCCCCCCCCC
44.90-
11MethylationRGGNRGGRGGFRGGF
CCCCCCCCCCCCCCC
44.9012756332
15Asymmetric dimethylarginineRGGRGGFRGGFRGGR
CCCCCCCCCCCCCCC
47.83-
15MethylationRGGRGGFRGGFRGGR
CCCCCCCCCCCCCCC
47.8312756332
19Asymmetric dimethylarginineGGFRGGFRGGRTGSA
CCCCCCCCCCCCCCC
50.35-
19MethylationGGFRGGFRGGRTGSA
CCCCCCCCCCCCCCC
50.3512756332
23PhosphorylationGGFRGGRTGSARSFQ
CCCCCCCCCCCCCCC
38.4730377154
25PhosphorylationFRGGRTGSARSFQQG
CCCCCCCCCCCCCCC
21.6430377154
28PhosphorylationGRTGSARSFQQGPPD
CCCCCCCCCCCCCCC
27.4230377154
36PhosphorylationFQQGPPDTVLEMGAF
CCCCCCCCEEEECCE
32.5330377154
59AcetylationVCRSINTKIPYFNAP
EEEECCCCCCCCCCC
36.8824489116
59UbiquitinationVCRSINTKIPYFNAP
EEEECCCCCCCCCCC
36.8823749301
72UbiquitinationAPIYLENKTQVGKVD
CCEEECCCCCCCCHH
30.8417644757
77UbiquitinationENKTQVGKVDEILGP
CCCCCCCCHHHHHCC
47.8922106047
108AcetylationTSFKEGDKFYIAADK
EECCCCCEEEEEECC
51.4224489116
115AcetylationKFYIAADKLLPIERF
EEEEEECCCCCHHHH
47.3924489116
147MethylationRSGAPGGRGGASMGR
CCCCCCCCCCCCCCC
46.4112756332
147Asymmetric dimethylarginineRSGAPGGRGGASMGR
CCCCCCCCCCCCCCC
46.41-
154MethylationRGGASMGRGGSRGGF
CCCCCCCCCCCCCCC
37.3412756332
154Asymmetric dimethylarginineRGGASMGRGGSRGGF
CCCCCCCCCCCCCCC
37.34-
158MethylationSMGRGGSRGGFRGGR
CCCCCCCCCCCCCCC
53.1512756332
158Asymmetric dimethylarginineSMGRGGSRGGFRGGR
CCCCCCCCCCCCCCC
53.15-
162Asymmetric dimethylarginineGGSRGGFRGGRGGSS
CCCCCCCCCCCCCCC
50.35-
162MethylationGGSRGGFRGGRGGSS
CCCCCCCCCCCCCCC
50.3512756332
165Asymmetric dimethylarginineRGGFRGGRGGSSFRG
CCCCCCCCCCCCCCC
49.47-
165MethylationRGGFRGGRGGSSFRG
CCCCCCCCCCCCCCC
49.4712756332
171MethylationGRGGSSFRGGRGGSS
CCCCCCCCCCCCCCC
48.9112756332
171Asymmetric dimethylarginineGRGGSSFRGGRGGSS
CCCCCCCCCCCCCCC
48.91-
174MethylationGSSFRGGRGGSSFRG
CCCCCCCCCCCCCCC
49.4712756332
174Asymmetric dimethylarginineGSSFRGGRGGSSFRG
CCCCCCCCCCCCCCC
49.47-
180Asymmetric dimethylarginineGRGGSSFRGGSRGGS
CCCCCCCCCCCCCCC
50.97-
180MethylationGRGGSSFRGGSRGGS
CCCCCCCCCCCCCCC
50.9712756332
184Asymmetric dimethylarginineSSFRGGSRGGSFRGG
CCCCCCCCCCCCCCC
57.68-
184MethylationSSFRGGSRGGSFRGG
CCCCCCCCCCCCCCC
57.6812756332
189MethylationGSRGGSFRGGSRGGS
CCCCCCCCCCCCCCC
50.7012756332
189Asymmetric dimethylarginineGSRGGSFRGGSRGGS
CCCCCCCCCCCCCCC
50.70-
193MethylationGSFRGGSRGGSRGGF
CCCCCCCCCCCCCCC
57.6812756332
193Asymmetric dimethylarginineGSFRGGSRGGSRGGF
CCCCCCCCCCCCCCC
57.68-
197Asymmetric dimethylarginineGGSRGGSRGGFRGGR
CCCCCCCCCCCCCCC
53.15-
197MethylationGGSRGGSRGGFRGGR
CCCCCCCCCCCCCCC
53.1512756332
201Asymmetric dimethylarginineGGSRGGFRGGRR---
CCCCCCCCCCCC---
50.35-
201MethylationGGSRGGFRGGRR---
CCCCCCCCCCCC---
50.3512756332

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of GAR1_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of GAR1_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of GAR1_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
CBF5_YEASTCBF5physical
14759368
GAR1_YEASTGAR1physical
14759368
NHP2_YEASTNHP2physical
14759368
NOP6_YEASTNOP6physical
14759368
YG5X_YEASTYGR283Cphysical
14759368
YM91_YEASTYMR310Cphysical
14759368
DED1_YEASTDED1physical
14759368
ESF1_YEASTESF1physical
14759368
CBF5_YEASTCBF5physical
11805826
LHP1_YEASTLHP1physical
11805826
C1TM_YEASTMIS1physical
11805826
RM02_YEASTMRP7physical
11805826
NOP4_YEASTNOP4physical
11805826
DPOE_YEASTPOL2physical
11805826
IF4F2_YEASTTIF4632physical
11805826
UTP20_YEASTUTP20physical
11805826
PUF6_YEASTPUF6physical
11805826
URB1_YEASTURB1physical
11805826
RRP12_YEASTRRP12physical
11805826
NHP2_YEASTNHP2physical
9843512
NHP2_YEASTNHP2physical
11433018
NOP10_YEASTNOP10physical
9843512
NHP2_YEASTNHP2physical
9848653
RCL1_YEASTRCL1physical
10790377
RIO1_YEASTRIO1genetic
11483523
RRP8_YEASTRRP8genetic
10864042
ROK1_YEASTROK1genetic
9154839
NHP2_YEASTNHP2physical
16554755
YG5X_YEASTYGR283Cphysical
16554755
CBF5_YEASTCBF5physical
16554755
YM91_YEASTYMR310Cphysical
16554755
KRI1_YEASTKRI1physical
16554755
FBRL_YEASTNOP1physical
16554755
NAF1_YEASTNAF1physical
17612558
GAR1_YEASTGAR1physical
18467557
HAS1_YEASTHAS1physical
18467557
RPA1_YEASTRPA190physical
18467557
RPA43_YEASTRPA43physical
18467557
BRX1_YEASTBRX1physical
18467557
GIS2_YEASTGIS2physical
18467557
UTP23_YEASTUTP23physical
18467557
PWP1_YEASTPWP1physical
18467557
TMA23_YEASTTMA23physical
18467557
NOC2_YEASTNOC2physical
18467557
FKBP4_YEASTFPR4physical
18467557
UBP10_YEASTUBP10physical
18467557
H1_YEASTHHO1physical
18467557
SRP40_YEASTSRP40physical
18467557
DBP2_YEASTDBP2physical
18467557
CBF5_YEASTCBF5physical
21893585
NHP2_YEASTNHP2physical
21893585
NOP6_YEASTNOP6physical
21893585
RS9A_YEASTRPS9Aphysical
21893585
RS9B_YEASTRPS9Bphysical
21893585
RPB7_YEASTRPB7physical
21893585
RS18A_YEASTRPS18Aphysical
21893585
RS18B_YEASTRPS18Aphysical
21893585
H2B1_YEASTHTB1physical
21893585
H2B2_YEASTHTB2physical
21893585
H4_YEASTHHF1physical
21893585
NOP10_YEASTNOP10physical
21893585
FUN14_YEASTFUN14genetic
27708008
ODPB_YEASTPDB1genetic
27708008
CYK3_YEASTCYK3genetic
27708008
NUM1_YEASTNUM1genetic
27708008
IPK1_YEASTIPK1genetic
27708008
AAKG_YEASTSNF4genetic
27708008
DBF2_YEASTDBF2genetic
27708008
MOG1_YEASTMOG1genetic
27708008
RL14A_YEASTRPL14Agenetic
27708008
DBP7_YEASTDBP7genetic
27708008
SST2_YEASTSST2genetic
27708008
BEM4_YEASTBEM4genetic
27708008
ATC3_YEASTDRS2genetic
27708008
URA7_YEASTURA7genetic
27708008
TOD6_YEASTTOD6genetic
27708008
PFF1_YEASTPFF1genetic
27708008
OPY1_YEASTOPY1genetic
27708008
BMT2_YEASTBMT2genetic
27708008
RMD9L_YEASTYBR238Cgenetic
27708008
DCC1_YEASTDCC1genetic
27708008
STE50_YEASTSTE50genetic
27708008
TMA17_YEASTTMA17genetic
27708008
TGL2_YEASTTGL2genetic
27708008
MNN10_YEASTMNN10genetic
27708008
OMS1_YEASTOMS1genetic
27708008
MRB1_YEASTPHO92genetic
27708008
LSM6_YEASTLSM6genetic
27708008
RMT2_YEASTRMT2genetic
27708008
BEM2_YEASTBEM2genetic
27708008
PDR1_YEASTPDR1genetic
27708008
ATC1_YEASTPMR1genetic
27708008
HUR1_YEASTHUR1genetic
27708008
ACOX_YEASTPOX1genetic
27708008
MDM34_YEASTMDM34genetic
27708008
YG1O_YEASTYGR035Cgenetic
27708008
VMA21_YEASTVMA21genetic
27708008
QCR9_YEASTQCR9genetic
27708008
PMT6_YEASTPMT6genetic
27708008
PHB2_YEASTPHB2genetic
27708008
TBP7_YEASTYTA7genetic
27708008
YOR1_YEASTYOR1genetic
27708008
YIA6_YEASTYIA6genetic
27708008
ICE2_YEASTICE2genetic
27708008
PTPA1_YEASTRRD1genetic
27708008
YIQ3_YEASTYIL163Cgenetic
27708008
PHO86_YEASTPHO86genetic
27708008
MNN11_YEASTMNN11genetic
27708008
YJ24_YEASTKCH1genetic
27708008
VPS24_YEASTVPS24genetic
27708008
YRA2_YEASTYRA2genetic
27708008
TOF2_YEASTTOF2genetic
27708008
MMM1_YEASTMMM1genetic
27708008
SMF3_YEASTSMF3genetic
27708008
ARP6_YEASTARP6genetic
27708008
APC9_YEASTAPC9genetic
27708008
HOG1_YEASTHOG1genetic
27708008
ACE2_YEASTACE2genetic
27708008
ATG26_YEASTATG26genetic
27708008
MMR1_YEASTMMR1genetic
27708008
LIPB_YEASTLIP2genetic
27708008
YL257_YEASTYLR257Wgenetic
27708008
ROM2_YEASTROM2genetic
27708008
YMP0_YEASTYMR010Wgenetic
27708008
MSS1_YEASTMSS1genetic
27708008
CTF18_YEASTCTF18genetic
27708008
ADH2_YEASTADH2genetic
27708008
ELP6_YEASTELP6genetic
27708008
INO4_YEASTINO4genetic
27708008
PT127_YEASTPET127genetic
27708008
HST3_YEASTHST3genetic
27708008
GLO4_YEASTGLO4genetic
27708008
IRC23_YEASTIRC23genetic
27708008
MSA1_YEASTMSA1genetic
27708008
VAM10_YEASTVAM10genetic
27708008
SYC1_YEASTSYC1genetic
27708008
LIPA_YEASTLIP5genetic
27708008
MSC6_YEASTMSC6genetic
27708008
GGPPS_YEASTBTS1genetic
27708008
ELP3_YEASTELP3genetic
27708008
YME1_YEASTYME1genetic
27708008
MTNA_YEASTMRI1genetic
27708008
KAR3_YEASTKAR3genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of GAR1_YEAST

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Related Literatures of Post-Translational Modification

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