SKI3_YEAST - dbPTM
SKI3_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID SKI3_YEAST
UniProt AC P17883
Protein Name Superkiller protein 3
Gene Name SKI3
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 1432
Subcellular Localization Cytoplasm. Nucleus.
Protein Description Component of the SKI complex involved in 3'-mRNA degradation pathway. Represses dsRNA virus propagation by specifically blocking translation of viral mRNAs, perhaps recognizing the absence of CAP or poly(A). Essential for cell growth only in the presence of M1 replicon..
Protein Sequence MSDIKQLLKEAKQELTNRDYEETIEISEKVLKLDPDNYFAHIFLGKALSSLPASNNVSSNRNLERATNHYVSAAKLVPDNLLAWKGLFLLFRTTEVVPDILSYDEYFDLCGQYADALLKQEQSQVELINDIKLLKKTHPDCQKAFYQHLKPGSLMAETIGRHLSTPQDALLNLIKILSNIETTEIGKTLSQNRLKLKASDPDYQIKLNSFSWEIIKNSEIDQLYNQLVNILADDQKRSEIENQWLEYRIKVLKSMPLDVKKDFFTKVKEMVEDMVLVNHQSLLAWQKYFEWTDYEDLDNMDAPLIIKYFKKFPKDPLAMILYSWLSSKLSKYDIKSLESANKPPEGHKKTEKETDIKDVDETNEDEVKDRVEDEVKDRVEDEVKDQDEEAKEDEEEDLDDIEIGLLEEEVVTVLTENIVKCKNNILAHRILCQYYLLTKEYEAALPYIKNGISLIAYNIKDLGVHLPLTKREFSLDLATVYTYVDAPKDHNAALKLYDNILSGDFSNIQAKMGKGIIFIERKNWKDAMTLLTQVHEQSPNNLEVLSELSWSKAHMGYMDEALAGLDTVIKGIKGMDLRSIDFRALNLWRQAKVYIMKHASINDAKQENVKCAFKLLIQSIKILDTFAPGFSTLGDIYCHYYKDHLRAFKCYFKAFDLDAGDYTAAKYITETYASKPNWQAASSIASRLIKGEKAKAELRSNNWPFRVVGIAHLEKQEESDSIEWFQSALRVDPNDVESWVGLGQAYHACGRIEASIKVFDKAIQLRPSHTFAQYFKAISLCDVGEYLESLDILEKVCQEAATEESFQIGLVEVLMRCSLDLYSQGFLLKSVSIAKDTIERIKIIISELKCENQQVWIYLSQVLRLFIWIESKVDTLPVESLVSIFENSQFSGSEEIDSVDNIKIDTLLDSTTDDNVSIACKFLILASKYSVSDQKFTDIAGTVRASYWYNIGISELTAFITLKEPQYRDAAIFAFKKSIQLQSNTSETWIGLGIATMDINFRVSQHCFIKATALEPKATNTWFNLAMLGLKKKDTEFAQQVLNKLQSLAPQDSSPWLGMALILEEQGDIIGSSKLFAHSFILSNGRSKAAQFMYAKNVLENHINNGDDERDIETVEKLTTASIALEQFFKKSPDSQFALQCALLTLERLHHYENANELANRLIGILEKKFEKTQDERELFNFAIIKGQFARIHLGLGNFELSIENADLSQGIISESSDEKSMKTKISNHICLGLSYFFLNDFDQTLNQFQELLSISKDSKHLVVLIAKVLYDVGESDTKEIALQELTEYIATSGADLLVTLTIAAMSILDDKREDLSIILEELKALPLSKQIIDKHKDAPYLIEEITKRLYRNDTGKQVWQRSAYFFPNNLKVWERLDKNIQRRIASNGQNKVTAEEMSKLYCESKNLRSIQRGMFLCPWNVTAVKALNECF
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
150AcetylationKAFYQHLKPGSLMAE
HHHHHHCCCCCCHHH
45.2524489116
197UbiquitinationSQNRLKLKASDPDYQ
HHCCEEEECCCCCHH
44.2323749301
218PhosphorylationSWEIIKNSEIDQLYN
EEEHHCCCHHHHHHH
30.8128132839
224PhosphorylationNSEIDQLYNQLVNIL
CCHHHHHHHHHHHHH
8.6724909858
327PhosphorylationILYSWLSSKLSKYDI
HHHHHHHHHCCCCCH
35.1327017623
675UbiquitinationITETYASKPNWQAAS
HHHHCCCCCCHHHHH
33.9123749301
830PhosphorylationSQGFLLKSVSIAKDT
HCCCCHHEEEECHHH
22.5225882841
837PhosphorylationSVSIAKDTIERIKII
EEEECHHHHHHHHHH
24.8325882841
937PhosphorylationSVSDQKFTDIAGTVR
CCCCCCCCCCCCHHH
33.2722369663
942PhosphorylationKFTDIAGTVRASYWY
CCCCCCCHHHHHHEE
9.5922369663
946PhosphorylationIAGTVRASYWYNIGI
CCCHHHHHHEEEEEH
12.9722369663
947PhosphorylationAGTVRASYWYNIGIS
CCHHHHHHEEEEEHH
15.7822369663
949PhosphorylationTVRASYWYNIGISEL
HHHHHHEEEEEHHEE
6.6722369663
954PhosphorylationYWYNIGISELTAFIT
HEEEEEHHEEEEEEE
22.7222369663
957PhosphorylationNIGISELTAFITLKE
EEEHHEEEEEEEECC
18.5722369663
961PhosphorylationSELTAFITLKEPQYR
HEEEEEEEECCCCHH
25.8922369663
976UbiquitinationDAAIFAFKKSIQLQS
HHHHHHHHHHEECCC
42.0319722269
977UbiquitinationAAIFAFKKSIQLQSN
HHHHHHHHHEECCCC
46.4619722269
1088MethylationILSNGRSKAAQFMYA
HHCCCCCHHHHHHHH
46.5120137074
1357UbiquitinationLYRNDTGKQVWQRSA
HHCCCCCCCHHHCEE
43.7123749301
1372AcetylationYFFPNNLKVWERLDK
EECCCCHHHHHHHHH
47.6424489116
1387PhosphorylationNIQRRIASNGQNKVT
HHHHHHHHCCCCCCC
38.8423749301
1392UbiquitinationIASNGQNKVTAEEMS
HHHCCCCCCCHHHHH
32.8323749301

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of SKI3_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of SKI3_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of SKI3_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
SKI8_YEASTSKI8physical
16043509
SKI2_YEASTSKI2physical
16043509
GBLP_YEASTASC1physical
16429126
RL25_YEASTRPL25physical
16429126
RL27A_YEASTRPL27Aphysical
16429126
RL3_YEASTRPL3physical
16429126
RL30_YEASTRPL30physical
16429126
RL8B_YEASTRPL8Bphysical
16429126
RS13_YEASTRPS13physical
16429126
RS17B_YEASTRPS17Bphysical
16429126
RS22A_YEASTRPS22Aphysical
16429126
RS4A_YEASTRPS4Aphysical
16429126
RS4B_YEASTRPS4Aphysical
16429126
RS5_YEASTRPS5physical
16429126
SKI2_YEASTSKI2physical
16429126
SKI8_YEASTSKI8physical
16429126
RL4B_YEASTRPL4Bphysical
16429126
RL28_YEASTRPL28physical
16429126
RLA4_YEASTRPP2Bphysical
16429126
RS9B_YEASTRPS9Bphysical
16429126
SSBP1_YEASTSBP1genetic
16782896
DOA1_YEASTDOA1genetic
17314980
PAT1_YEASTPAT1genetic
17314980
LSM1_YEASTLSM1genetic
17314980
RPN10_YEASTRPN10genetic
17314980
CIK1_YEASTCIK1genetic
17314980
RPN4_YEASTRPN4genetic
17314980
RPA1_YEASTRPA190genetic
17314980
UBP6_YEASTUBP6genetic
17314980
SDC1_YEASTSDC1genetic
17314980
VPS64_YEASTVPS64genetic
17314980
SQS1_YEASTSQS1genetic
17314980
LRP1_YEASTLRP1genetic
17314980
TAF12_YEASTTAF12genetic
17314980
XRN1_YEASTXRN1genetic
17314980
LEO1_YEASTLEO1genetic
17314980
ARO1_YEASTARO1genetic
17314980
TAF14_YEASTTAF14genetic
17314980
IRA2_YEASTIRA2genetic
17314980
RPA43_YEASTRPA43genetic
17314980
T2FB_YEASTTFG2genetic
17314980
BRE5_YEASTBRE5genetic
17314980
PRI1_YEASTPRI1genetic
17314980
SKI2_YEASTSKI2physical
18042677
SKI8_YEASTSKI8physical
18042677
SKI3_YEASTSKI3physical
18467557
PAT1_YEASTPAT1genetic
19061648
UBP6_YEASTUBP6genetic
19061648
RPN4_YEASTRPN4genetic
19061648
NOP3_YEASTNPL3genetic
19061648
SDC1_YEASTSDC1genetic
19061648
XRN1_YEASTXRN1genetic
19061648
LSM1_YEASTLSM1genetic
19061648
DOA1_YEASTDOA1genetic
19061648
SN309_YEASTSNT309genetic
19061648
LRP1_YEASTLRP1genetic
19061648
RPN10_YEASTRPN10genetic
19061648
LRS4_YEASTLRS4genetic
19061648
XDJ1_YEASTXDJ1physical
19536198
SSB2_YEASTSSB2physical
19536198
HSP7F_YEASTSSE1physical
19536198
RS8A_YEASTRPS8Agenetic
20093466
RS8B_YEASTRPS8Agenetic
20093466
OLA1_YEASTOLA1genetic
20093466
CSG2_YEASTCSG2genetic
20093466
REI1_YEASTREI1genetic
20093466
YIH1_YEASTYIH1genetic
20093466
PAT1_YEASTPAT1genetic
20093466
RLA1_YEASTRPP1Agenetic
20093466
VMS1_YEASTVMS1genetic
20093466
SAC3_YEASTSAC3genetic
20093466
MNN10_YEASTMNN10genetic
20093466
RLA4_YEASTRPP2Bgenetic
20093466
RV167_YEASTRVS167genetic
20093466
SLX8_YEASTSLX8genetic
20093466
UBP6_YEASTUBP6genetic
20093466
SKI8_YEASTSKI8genetic
20093466
SGF73_YEASTSGF73genetic
20093466
PALF_YEASTRIM8genetic
20093466
TFS2_YEASTDST1genetic
20093466
RL24A_YEASTRPL24Agenetic
20093466
DBF2_YEASTDBF2genetic
20093466
SLH1_YEASTSLH1genetic
20093466
YOR1_YEASTYOR1genetic
20093466
NPR3_YEASTNPR3genetic
20093466
LRP1_YEASTLRP1genetic
20093466
PTH_YEASTPTH1genetic
20093466
NUC1_YEASTNUC1genetic
20093466
PRY1_YEASTPRY1genetic
20093466
CYP7_YEASTCPR7genetic
20093466
DOA1_YEASTDOA1genetic
20093466
BCH2_YEASTBCH2genetic
20093466
CDC73_YEASTCDC73genetic
20093466
HMDH1_YEASTHMG1genetic
20093466
RSF1_YEASTRSF1genetic
20093466
CIK1_YEASTCIK1genetic
20093466
EOS1_YEASTEOS1genetic
20093466
IRA2_YEASTIRA2genetic
20093466
MET22_YEASTMET22genetic
20093466
VPH1_YEASTVPH1genetic
20093466
NACB1_YEASTEGD1genetic
20093466
EDC2_YEASTEDC2genetic
11139489
RTC6_YEASTRTC6genetic
20691087
SRS2_YEASTSRS2genetic
21459050
TCPZ_YEASTCCT6genetic
27708008
THRC_YEASTTHR4genetic
27708008
BUD31_YEASTBUD31genetic
27708008
MED5_YEASTNUT1genetic
27708008
ACE2_YEASTACE2genetic
27708008
TECR_YEASTTSC13genetic
27708008
RPN6_YEASTRPN6genetic
27708008
RPB7_YEASTRPB7genetic
27708008
PSB3_YEASTPUP3genetic
27708008
CDC4_YEASTCDC4genetic
27708008
ACT_YEASTACT1genetic
27708008
RPN11_YEASTRPN11genetic
27708008
PSB7_YEASTPRE4genetic
27708008
MTR4_YEASTMTR4genetic
27708008
DPOD2_YEASTPOL31genetic
27708008
SDO1_YEASTSDO1genetic
27708008
PSA7_YEASTPRE10genetic
27708008
NU170_YEASTNUP170genetic
27708008
OLA1_YEASTOLA1genetic
27708008
CSG2_YEASTCSG2genetic
27708008
BMT2_YEASTBMT2genetic
27708008
REI1_YEASTREI1genetic
27708008
PAT1_YEASTPAT1genetic
27708008
SLX5_YEASTSLX5genetic
27708008
RPN4_YEASTRPN4genetic
27708008
RLA1_YEASTRPP1Agenetic
27708008
GCS1_YEASTGCS1genetic
27708008
VMS1_YEASTVMS1genetic
27708008
TPS2_YEASTTPS2genetic
27708008
SWF1_YEASTSWF1genetic
27708008
SAC3_YEASTSAC3genetic
27708008
MNN10_YEASTMNN10genetic
27708008
RLA4_YEASTRPP2Bgenetic
27708008
UBP6_YEASTUBP6genetic
27708008
RL24A_YEASTRPL24Agenetic
27708008
TFS2_YEASTDST1genetic
27708008
SGF73_YEASTSGF73genetic
27708008
XRN1_YEASTXRN1genetic
27708008
RS25A_YEASTRPS25Agenetic
27708008
RL11B_YEASTRPL11Bgenetic
27708008
DBF2_YEASTDBF2genetic
27708008
SLH1_YEASTSLH1genetic
27708008
NPR3_YEASTNPR3genetic
27708008
SNF6_YEASTSNF6genetic
27708008
LRP1_YEASTLRP1genetic
27708008
UBA4_YEASTUBA4genetic
27708008
STB5_YEASTSTB5genetic
27708008
PTH_YEASTPTH1genetic
27708008
LSM1_YEASTLSM1genetic
27708008
CBPS_YEASTCPS1genetic
27708008
NUC1_YEASTNUC1genetic
27708008
CYP7_YEASTCPR7genetic
27708008
DOA1_YEASTDOA1genetic
27708008
BCH2_YEASTBCH2genetic
27708008
RS21A_YEASTRPS21Agenetic
27708008
UBI4P_YEASTUBI4genetic
27708008
FKS1_YEASTFKS1genetic
27708008
CDC73_YEASTCDC73genetic
27708008
RSF1_YEASTRSF1genetic
27708008
PFKA2_YEASTPFK2genetic
27708008
YNF8_YEASTYNL058Cgenetic
27708008
EOS1_YEASTEOS1genetic
27708008
MET22_YEASTMET22genetic
27708008
RRP6_YEASTRRP6genetic
27708008
BUD21_YEASTBUD21genetic
27708008
VPH1_YEASTVPH1genetic
27708008
RMI1_YEASTRMI1genetic
27708008
NACB1_YEASTEGD1genetic
27708008
SKI2_YEASTSKI2physical
27980209
SKI8_YEASTSKI8physical
27980209
TCPZ_YEASTCCT6genetic
29674565
SNT1_YEASTSNT1genetic
29674565
BUD31_YEASTBUD31genetic
29674565
PAT1_YEASTPAT1genetic
29674565
NSE4_YEASTNSE4genetic
29674565
DAD1_YEASTDAD1genetic
29674565
STN1_YEASTSTN1genetic
29674565
INO2_YEASTINO2genetic
29674565
TAF12_YEASTTAF12genetic
29674565
TCPA_YEASTTCP1genetic
29674565
SHC1_YEASTSHC1genetic
29674565
UBP3_YEASTUBP3genetic
29674565
COG3_YEASTCOG3genetic
29674565
RL24A_YEASTRPL24Agenetic
29674565
TFS2_YEASTDST1genetic
29674565
GCN1_YEASTGCN1genetic
29674565
BRR6_YEASTBRR6genetic
29674565
CBF3A_YEASTCBF2genetic
29674565
LRP1_YEASTLRP1genetic
29674565
LSM1_YEASTLSM1genetic
29674565
YJ9I_YEASTYJR141Wgenetic
29674565
ELF1_YEASTELF1genetic
29674565
BCH2_YEASTBCH2genetic
29674565
SDO1_YEASTSDO1genetic
29674565
RL37A_YEASTRPL37Agenetic
29674565
PFD6_YEASTYKE2genetic
29674565
RS28B_YEASTRPS28Bgenetic
29674565
MSC1_YEASTMSC1genetic
29674565
PHO80_YEASTPHO80genetic
29674565
MET22_YEASTMET22genetic
29674565
BEM3_YEASTBEM3genetic
29674565
YAR1_YEASTYAR1genetic
29674565
SC61A_YEASTSEC61genetic
29674565

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of SKI3_YEAST

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Related Literatures of Post-Translational Modification

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