BEM3_YEAST - dbPTM
BEM3_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID BEM3_YEAST
UniProt AC P32873
Protein Name GTPase-activating protein BEM3
Gene Name BEM3
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 1128
Subcellular Localization Cytoplasm.
Protein Description GTPase-activating protein (GAP) for CDC42 and less efficiently for RHO1. Negative regulator of the pheromone-response pathway through the STE20 protein kinase..
Protein Sequence MTDNLTTTHGGSTTLELLAQYNDHRSKKDKSIEHIEKGTCSGKERNPSYDEIFTENIKLKLQVQEYETEIESLEKVIDMLQKNREASLEVVLEQVQNDSRDSYVNDQSFVLPPRSAERKAHIKSLNLPIPTLSPPLQQGSDVALETSVTPTVPQIGVTSNTSISRKHLQNMILNDEIEANSSFSSPKIINRSVSSPTKIHSEQLASPAASVTYTTSRITIKSPNKGSKSPLQERLRSPQNPNRMTAVINNHLHSPLKASTSNNLDELTESKSQQLTNDAIQKNDRVYSSITSSAYTTGTPTSAAKSPSSLLEVKEGENKALGFSPASKEKLDDFTQLLDSSFGEEDLVNTDSKDPLSIKSTINESLPPPPAPPTFFSPTSSGNIKNSTPLSSHLASPVILNKKDDNFGAQSAKNLKKPVLTSSLPNLSTKLSTTSQNASLPPNPPVESSSKQKQLGETASIHSTNTLNTFSSTPQGSLKTLRRPHASSVSTVKSVAQSLKSDIPLFVQPEDFGTIQIEVLSTLYRDNEDDLSILIAIIDRKSGKEMFKFSKSIHKVRELDVYMKSHVPDLPLPTLPDRQLFQTLSPTKVDTRKNILNQYYTSIFSVPEFPKNVGLKIAQFISTDTVMTPPMMDDNVKDGSLLLRRPKTLTGNSTWRVRYGILRDDVLQLFDKNQLTETIKLRQSSIELIPNLPEDRFGTRNGFLITEHKKSGLSTSTKYYICTETSKERELWLSAFSDYIDPSQSLSLSSSRNANDTDSASHLSAGTHHSKFGNATISATDTPSYVTDLTQEYNNNNNISNSSNNIANSDGIDSNPSSHSNFLASSSGNAEEEKDSRRAKMRSLFPFKKLTGPASAMNHIGITISNDSDSPTSPDSIIKSPSKKLMEVSSSSNSSTGPHVSTAIFGSSLETCLRLSSHKYQNVYDLPSVVYRCLEYLYKNRGIQEEGIFRLSGSSTVIKTLQERFDKEYDVDLCRYNESIEAKDDEASPSLYIGVNTVSGLLKLYLRKLPHLLFGDEQFLSFKRVVDENHNNPVQISLGFKELIESGLVPHANLSLMYALFELLVRINENSKFNKMNLRNLCIVFSPTLNIPISMLQPFITDFACIFQGGEPVKEEEREKVDIHIPQV
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
31PhosphorylationHRSKKDKSIEHIEKG
CCCCCCCCCHHHHCC
43.2628889911
108PhosphorylationDSYVNDQSFVLPPRS
CCCCCCCCCCCCCCC
21.8624961812
115PhosphorylationSFVLPPRSAERKAHI
CCCCCCCCHHHHHHH
40.0123749301
181PhosphorylationNDEIEANSSFSSPKI
CCCHHCCCCCCCCCH
39.5519684113
182PhosphorylationDEIEANSSFSSPKII
CCHHCCCCCCCCCHH
29.0228889911
184PhosphorylationIEANSSFSSPKIINR
HHCCCCCCCCCHHCC
47.9124961812
185PhosphorylationEANSSFSSPKIINRS
HCCCCCCCCCHHCCC
28.3619684113
192PhosphorylationSPKIINRSVSSPTKI
CCCHHCCCCCCCCCC
23.1220377248
194PhosphorylationKIINRSVSSPTKIHS
CHHCCCCCCCCCCCH
31.6717330950
195PhosphorylationIINRSVSSPTKIHSE
HHCCCCCCCCCCCHH
34.1420377248
197PhosphorylationNRSVSSPTKIHSEQL
CCCCCCCCCCCHHHH
44.5720377248
201PhosphorylationSSPTKIHSEQLASPA
CCCCCCCHHHHCCCC
30.4321440633
206PhosphorylationIHSEQLASPAASVTY
CCHHHHCCCCCEEEE
24.5428152593
210PhosphorylationQLASPAASVTYTTSR
HHCCCCCEEEEEECE
19.6628152593
212PhosphorylationASPAASVTYTTSRIT
CCCCCEEEEEECEEE
16.8023749301
214PhosphorylationPAASVTYTTSRITIK
CCCEEEEEECEEEEE
14.6624961812
215PhosphorylationAASVTYTTSRITIKS
CCEEEEEECEEEEEC
12.9524961812
216PhosphorylationASVTYTTSRITIKSP
CEEEEEECEEEEECC
17.5624961812
219PhosphorylationTYTTSRITIKSPNKG
EEEECEEEEECCCCC
22.6521440633
222PhosphorylationTSRITIKSPNKGSKS
ECEEEEECCCCCCCC
29.8325533186
227PhosphorylationIKSPNKGSKSPLQER
EECCCCCCCCHHHHH
31.4128889911
229PhosphorylationSPNKGSKSPLQERLR
CCCCCCCCHHHHHHC
32.3225533186
237PhosphorylationPLQERLRSPQNPNRM
HHHHHHCCCCCCCCC
35.1125533186
245PhosphorylationPQNPNRMTAVINNHL
CCCCCCCHHHHHCCC
17.9724961812
254PhosphorylationVINNHLHSPLKASTS
HHHCCCCCCCCCCCC
37.9821082442
259PhosphorylationLHSPLKASTSNNLDE
CCCCCCCCCCCCHHH
30.6821440633
260PhosphorylationHSPLKASTSNNLDEL
CCCCCCCCCCCHHHH
40.0929136822
261PhosphorylationSPLKASTSNNLDELT
CCCCCCCCCCHHHHC
22.6428889911
270PhosphorylationNLDELTESKSQQLTN
CHHHHCHHHHHHHHH
32.1629136822
272PhosphorylationDELTESKSQQLTNDA
HHHCHHHHHHHHHHH
32.2229136822
276PhosphorylationESKSQQLTNDAIQKN
HHHHHHHHHHHHHHC
27.0729136822
291PhosphorylationDRVYSSITSSAYTTG
HHHHHEECCCCCCCC
20.6927017623
295PhosphorylationSSITSSAYTTGTPTS
HEECCCCCCCCCCCC
13.5427017623
297PhosphorylationITSSAYTTGTPTSAA
ECCCCCCCCCCCCCC
26.7827017623
299PhosphorylationSSAYTTGTPTSAAKS
CCCCCCCCCCCCCCC
22.6921440633
301PhosphorylationAYTTGTPTSAAKSPS
CCCCCCCCCCCCCHH
30.7330377154
302PhosphorylationYTTGTPTSAAKSPSS
CCCCCCCCCCCCHHH
27.6821440633
306PhosphorylationTPTSAAKSPSSLLEV
CCCCCCCCHHHCEEE
25.8622890988
308PhosphorylationTSAAKSPSSLLEVKE
CCCCCCHHHCEEEEC
40.4822890988
309PhosphorylationSAAKSPSSLLEVKEG
CCCCCHHHCEEEECC
40.1222369663
324PhosphorylationENKALGFSPASKEKL
CCCCCCCCHHHHHHH
20.1222369663
327PhosphorylationALGFSPASKEKLDDF
CCCCCHHHHHHHHHH
44.7422369663
340PhosphorylationDFTQLLDSSFGEEDL
HHHHHHHHCCCCCCC
27.7724961812
341PhosphorylationFTQLLDSSFGEEDLV
HHHHHHHCCCCCCCC
36.6221440633
377PhosphorylationPAPPTFFSPTSSGNI
CCCCCCCCCCCCCCC
24.0721551504
379PhosphorylationPPTFFSPTSSGNIKN
CCCCCCCCCCCCCCC
34.0321551504
380PhosphorylationPTFFSPTSSGNIKNS
CCCCCCCCCCCCCCC
39.3627017623
381PhosphorylationTFFSPTSSGNIKNST
CCCCCCCCCCCCCCC
38.0327017623
387PhosphorylationSSGNIKNSTPLSSHL
CCCCCCCCCCCCHHC
26.8021440633
388PhosphorylationSGNIKNSTPLSSHLA
CCCCCCCCCCCHHCC
37.3321440633
391PhosphorylationIKNSTPLSSHLASPV
CCCCCCCCHHCCCCE
19.5428152593
392PhosphorylationKNSTPLSSHLASPVI
CCCCCCCHHCCCCEE
30.1528152593
396PhosphorylationPLSSHLASPVILNKK
CCCHHCCCCEECCCC
26.5128152593
421PhosphorylationNLKKPVLTSSLPNLS
HCCCCCCCCCCCCCC
19.2622369663
422PhosphorylationLKKPVLTSSLPNLST
CCCCCCCCCCCCCCC
26.2222369663
423PhosphorylationKKPVLTSSLPNLSTK
CCCCCCCCCCCCCCC
42.4822369663
428PhosphorylationTSSLPNLSTKLSTTS
CCCCCCCCCCCCCCC
30.0922369663
429PhosphorylationSSLPNLSTKLSTTSQ
CCCCCCCCCCCCCCC
38.8922369663
458PhosphorylationKQKQLGETASIHSTN
HCHHHCCCCEEECCC
24.7321440633
460PhosphorylationKQLGETASIHSTNTL
HHHCCCCEEECCCCC
28.4022369663
463PhosphorylationGETASIHSTNTLNTF
CCCCEEECCCCCCCC
22.9821440633
464PhosphorylationETASIHSTNTLNTFS
CCCEEECCCCCCCCC
20.3322369663
466PhosphorylationASIHSTNTLNTFSST
CEEECCCCCCCCCCC
22.8222369663
469PhosphorylationHSTNTLNTFSSTPQG
ECCCCCCCCCCCCCC
28.1822369663
471PhosphorylationTNTLNTFSSTPQGSL
CCCCCCCCCCCCCCC
31.1222369663
472PhosphorylationNTLNTFSSTPQGSLK
CCCCCCCCCCCCCCH
39.6622369663
473PhosphorylationTLNTFSSTPQGSLKT
CCCCCCCCCCCCCHH
20.5922369663
477PhosphorylationFSSTPQGSLKTLRRP
CCCCCCCCCHHCCCC
22.8022369663
480PhosphorylationTPQGSLKTLRRPHAS
CCCCCCHHCCCCCCC
30.6924961812
487PhosphorylationTLRRPHASSVSTVKS
HCCCCCCCCHHHHHH
28.3915665377
488PhosphorylationLRRPHASSVSTVKSV
CCCCCCCCHHHHHHH
22.3721551504
490PhosphorylationRPHASSVSTVKSVAQ
CCCCCCHHHHHHHHH
29.4528889911
491PhosphorylationPHASSVSTVKSVAQS
CCCCCHHHHHHHHHH
29.7819684113
494PhosphorylationSSVSTVKSVAQSLKS
CCHHHHHHHHHHHHC
20.5319684113
498PhosphorylationTVKSVAQSLKSDIPL
HHHHHHHHHHCCCCE
28.2028889911
574PhosphorylationVPDLPLPTLPDRQLF
CCCCCCCCCCCHHHH
59.6224961812
583PhosphorylationPDRQLFQTLSPTKVD
CCHHHHHHCCCCCCC
23.1321440633
585PhosphorylationRQLFQTLSPTKVDTR
HHHHHHCCCCCCCCH
33.6325521595
587PhosphorylationLFQTLSPTKVDTRKN
HHHHCCCCCCCCHHH
40.0821440633
711PhosphorylationLITEHKKSGLSTSTK
EEEECCCCCCCCCCC
50.1730377154
720PhosphorylationLSTSTKYYICTETSK
CCCCCCEEEEECCCH
7.3530377154
723PhosphorylationSTKYYICTETSKERE
CCCEEEEECCCHHHH
32.5130377154
757PhosphorylationSSRNANDTDSASHLS
CCCCCCCCCCCCCCC
31.4921082442
759PhosphorylationRNANDTDSASHLSAG
CCCCCCCCCCCCCCC
33.4921082442
761PhosphorylationANDTDSASHLSAGTH
CCCCCCCCCCCCCCC
28.9824930733
764PhosphorylationTDSASHLSAGTHHSK
CCCCCCCCCCCCCCC
21.1621082442
868PhosphorylationGITISNDSDSPTSPD
EEEEECCCCCCCCCC
44.2121440633
870PhosphorylationTISNDSDSPTSPDSI
EEECCCCCCCCCCHH
33.7521440633
872PhosphorylationSNDSDSPTSPDSIIK
ECCCCCCCCCCHHCC
57.7728889911
873PhosphorylationNDSDSPTSPDSIIKS
CCCCCCCCCCHHCCC
30.0524961812
876PhosphorylationDSPTSPDSIIKSPSK
CCCCCCCHHCCCCCC
29.6024961812
880PhosphorylationSPDSIIKSPSKKLME
CCCHHCCCCCCCCEE
24.8128889911
997PhosphorylationSLYIGVNTVSGLLKL
CEEEEHHHHHHHHHH
17.4027017623
999PhosphorylationYIGVNTVSGLLKLYL
EEEHHHHHHHHHHHH
22.9927017623

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of BEM3_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of BEM3_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of BEM3_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
TBP7_YEASTYTA7physical
11805837
DOP1_YEASTDOP1physical
11805837
YIF5_YEASTYIL055Cphysical
11805837
BEM4_YEASTBEM4physical
11489916
CLA4_YEASTCLA4physical
11489916
ZDS1_YEASTZDS1physical
11489916
ZDS2_YEASTZDS2physical
11489916
CG12_YEASTCLN2physical
15200949
RGA1_YEASTRGA1genetic
8657111
CDC42_YEASTCDC42physical
17914457
CDC24_YEASTCDC24genetic
17914457
BCK1_YEASTBCK1genetic
19269370
FAR1_YEASTFAR1genetic
19269370
SWI6_YEASTSWI6genetic
19269370
YP150_YEASTYPL150Wgenetic
19269370
ENT2_YEASTENT2genetic
19531587
SLA1_YEASTSLA1genetic
20093466
BEM1_YEASTBEM1genetic
20093466
PP2C1_YEASTPTC1genetic
20093466
BEM2_YEASTBEM2genetic
20093466
SLT2_YEASTSLT2genetic
20093466
ATG32_YEASTATG32genetic
20093466
FMC1_YEASTFMC1genetic
20093466
BCK1_YEASTBCK1genetic
20093466
CBT1_YEASTCBT1genetic
20093466
ELM1_YEASTELM1genetic
20093466
SHE4_YEASTSHE4genetic
20093466
SLA1_YEASTSLA1genetic
20526336
SLT2_YEASTSLT2genetic
20526336
FAB1_YEASTFAB1genetic
20526336
RV161_YEASTRVS161genetic
20526336
RV167_YEASTRVS167genetic
20526336
ELM1_YEASTELM1genetic
20526336
TBP6_YEASTYTA6genetic
20526336
END3_YEASTEND3genetic
20526336
TGS1_YEASTTGS1genetic
20526336
ELM1_YEASTELM1genetic
22282571
RGA1_YEASTRGA1genetic
23242998
YM11_YEASTEPO1physical
25547157
RPB7_YEASTRPB7genetic
27708008
KPC1_YEASTPKC1genetic
27708008
CKS1_YEASTCKS1genetic
27708008
MED8_YEASTMED8genetic
27708008
TCPD_YEASTCCT4genetic
27708008
PDC2_YEASTPDC2genetic
27708008
CDC37_YEASTCDC37genetic
27708008
ACT_YEASTACT1genetic
27708008
CDC12_YEASTCDC12genetic
27708008
MOB1_YEASTMOB1genetic
27708008
MCM10_YEASTMCM10genetic
27708008
PAN1_YEASTPAN1genetic
27708008
CDC11_YEASTCDC11genetic
27708008
RPB2_YEASTRPB2genetic
27708008
SLA1_YEASTSLA1genetic
27708008
BUD31_YEASTBUD31genetic
27708008
NBP2_YEASTNBP2genetic
27708008
UME6_YEASTUME6genetic
27708008
SNF6_YEASTSNF6genetic
27708008
FMC1_YEASTFMC1genetic
27708008
AIM26_YEASTAIM26genetic
27708008
ELM1_YEASTELM1genetic
27708008
CBT1_YEASTCBT1genetic
27708008
CCW12_YEASTCCW12genetic
27708008
SWI6_YEASTSWI6genetic
27708008
KPC1_YEASTPKC1genetic
29674565
BDF2_YEASTBDF2genetic
29674565
PEX13_YEASTPEX13genetic
29674565
GTR1_YEASTGTR1genetic
29674565
LST8_YEASTLST8genetic
29674565
LSM7_YEASTLSM7genetic
29674565
BUD14_YEASTBUD14genetic
29674565
SLA1_YEASTSLA1genetic
29674565
STU1_YEASTSTU1genetic
29674565
CKS1_YEASTCKS1genetic
29674565
RV161_YEASTRVS161genetic
29674565
CYK3_YEASTCYK3genetic
29674565
DBF4_YEASTDBF4genetic
29674565
NBP2_YEASTNBP2genetic
29674565
TCPA_YEASTTCP1genetic
29674565
SWI4_YEASTSWI4genetic
29674565
ART5_YEASTART5genetic
29674565
ESP1_YEASTESP1genetic
29674565
DAM1_YEASTDAM1genetic
29674565
SMI1_YEASTSMI1genetic
29674565
SLT2_YEASTSLT2genetic
29674565
PAN1_YEASTPAN1genetic
29674565
BCK1_YEASTBCK1genetic
29674565
TCPE_YEASTCCT5genetic
29674565
CDC11_YEASTCDC11genetic
29674565
ACE2_YEASTACE2genetic
29674565
VRP1_YEASTVRP1genetic
29674565
YPT7_YEASTYPT7genetic
29674565
PML39_YEASTPML39genetic
29674565
ERG2_YEASTERG2genetic
29674565
RNA1_YEASTRNA1genetic
29674565
GPI15_YEASTGPI15genetic
29674565
MAS5_YEASTYDJ1genetic
29674565
2A5D_YEASTRTS1genetic
29674565
CSK2C_YEASTCKB2genetic
29674565
DIA2_YEASTDIA2genetic
29674565
RGA1_YEASTRGA1genetic
29674565
PEX22_YEASTPEX22genetic
29674565
SIF2_YEASTSIF2genetic
29674565
SNT1_YEASTSNT1genetic
29674565
PAT1_YEASTPAT1genetic
29674565
TPS2_YEASTTPS2genetic
29674565
UBC13_YEASTUBC13genetic
29674565
WDR59_YEASTMTC5genetic
29674565
UME6_YEASTUME6genetic
29674565
FCF1_YEASTFCF1genetic
29674565
GCN20_YEASTGCN20genetic
29674565
GCN1_YEASTGCN1genetic
29674565
UBCX_YEASTPEX4genetic
29674565
RPC9_YEASTRPC17genetic
29674565
TIM16_YEASTPAM16genetic
29674565
TOF2_YEASTTOF2genetic
29674565
EI2BA_YEASTGCN3genetic
29674565
PEX12_YEASTPEX12genetic
29674565
ASE1_YEASTASE1genetic
29674565

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of BEM3_YEAST

loading...

Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-324; SER-423 ANDSER-488, AND MASS SPECTROMETRY.
"Proteome-wide identification of in vivo targets of DNA damagecheckpoint kinases.";
Smolka M.B., Albuquerque C.P., Chen S.H., Zhou H.;
Proc. Natl. Acad. Sci. U.S.A. 104:10364-10369(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-423, AND MASSSPECTROMETRY.
"Quantitative phosphoproteomics applied to the yeast pheromonesignaling pathway.";
Gruhler A., Olsen J.V., Mohammed S., Mortensen P., Faergeman N.J.,Mann M., Jensen O.N.;
Mol. Cell. Proteomics 4:310-327(2005).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-194 AND SER-324, ANDMASS SPECTROMETRY.

TOP