RIK1_SCHPO - dbPTM
RIK1_SCHPO - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RIK1_SCHPO
UniProt AC Q10426
Protein Name Chromatin modification-related protein rik1
Gene Name rik1
Organism Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
Sequence Length 1040
Subcellular Localization Nucleus . Cytoplasm, cytoskeleton, microtubule organizing center, spindle pole body .
Protein Description Component of the rik1-associated E3 ubiquitin ligase complex that shows ubiquitin ligase activity and is required for histone H3K9 methylation. H3K9me represents a specific tag for epigenetic transcriptional repression by recruiting swi6/HP1 to methylated histones which leads to transcriptional silencing within centromeric heterochromatin, telomeric regions and at the silent mating-type loci. Rik1 has also a function in meiotic telomere clustering..
Protein Sequence MALCVHSFWATAVDTATSCHFISSENCLVLLQALKINIYLCSEVHGLQFFTSIPLFSTVKHIRPYRPPGLDRDYLFVVLNDDTYFSIYWDEDYQKVIVDHPPVRYRVTFPWNRNAKSYCLVDLRMRAIFLSIDEISMICIRILSAEERLKTGRSIDSGFPFSFPVHLIYDMCILNDSSTPTLVVLHSDGLDCYVTAFLLDLSSKSLGKGIRLFERVKPSMIMPFGKRGLLVFESLFIHCMYRGNFVTINGPCTTYMHWTPLKGQKMHYIVCDTNGYLFGVYSSILGKNKWSLVMERLPIPPFDFITSLNSIHEGLLFIGSKNSESKLINLSTLKDVDSIPNLGPIHDLLVLKNDIEKSFLVCAGTPRNASLIYFQHALKLDILGQTKISGILRAMVLPSYPEHKLFLGFPSETVAFNIKEDFQLELDPSLSTKERTIALSGTNGEFVQVTSTFLCIYDSAKRSRLVYIEKITNAACYQEYSAIVINGTALAIFKKDTEVARKVFESEISCLDFSAQFQIGVGFWSKQVMILTFSDNSSISCAFQTNVPSLPRNIILEGVGVDRNLLLVSSGSGEFKSYVLFKNNLVFSETKHFGTTPVSFRRFTMNIGTYIICNNDCPHMVYGFNGALCYMPLSMPQSYDVCQFRDNSGKDFLISVSLGGLKFLQLNPLPELTPRKVLLEHVPLQAIIFQNKLLLRTLENRYEDYESYKENYHLELVDSYDDNSFRVFSFTENERCEKVLKINESSLLVGTSIIEQDKLVPVNGRLILLEFEKELQSLKVVSSMVLSAAVIDLGVYNDRYIVAFGQQVAIVKLTEERLMIDSRISLGSIVLQLIVEGNEIAIADSIGRFTIMYFDGQKFIVVARYLFGENIVKAALYEGTVYIIATNSGLLKLLRYNKDAKNFNDRFICESVYHLHDKVSKFQNFPITNTNSFLEPKMLFATEIGAIGSIVSLKDKELELEELTRKIRKLKFSYLSSMDYESIEADLISPVPFIDGDLVIDVKRWASSELFRLCRSVEHRESLNSYQKVQALLEEIQSLC
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster

Oops, there are no PTM records of RIK1_SCHPO !!

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RIK1_SCHPO !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RIK1_SCHPO !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RIK1_SCHPO !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
CUL4_SCHPOpcu4physical
16127433
CUL4_SCHPOpcu4physical
16024659
RAF1_SCHPOraf1physical
16024659
RAF2_SCHPOraf2physical
16024659
RBX1_SCHPOrbx1physical
16024659
CLR4_SCHPOclr4physical
16024659
H2B1_SCHPOhtb1physical
16024659
RAF1_SCHPOraf1physical
17114925
RAF2_SCHPOraf2physical
17114925
CUL4_SCHPOpcu4physical
17114925
H2B1_SCHPOhtb1physical
17114925
RAD24_SCHPOrad24physical
17114925
CLR4_SCHPOclr4physical
17114925
UBL1_SCHPOned8physical
17114925
CHP1_SCHPOchp1physical
18345014
MPH1L_SCHPOmph1genetic
18931302
SLM9_SCHPOslm9genetic
18931302
CTU1_SCHPOctu1genetic
18931302
CLR3_SCHPOclr3genetic
18931302
NSE5_SCHPOnse5genetic
18931302
FHL1_SCHPOfhl1genetic
18931302
ELP3_SCHPOelp3genetic
18931302
RAD57_SCHPOrad57genetic
18931302
MAL3_SCHPOmal3genetic
18931302
FIN1_SCHPOfin1genetic
18931302
FLP1_SCHPOclp1genetic
18931302
CHL1_SCHPOchl1genetic
18931302
MRC1_SCHPOmrc1genetic
18931302
ASE1_SCHPOase1genetic
18931302
TLG2_SCHPOtlg2genetic
18931302
SWI3_SCHPOswi3genetic
18931302
YK12_SCHPOscm3genetic
12719471
SIM4_SCHPOsim4genetic
12719471
MIS6_SCHPOmis6genetic
12719471
AGO1_SCHPOago1physical
20705239
DCR1_SCHPOdcr1genetic
20705239
AGO1_SCHPOago1genetic
20705239
CHP1_SCHPOchp1genetic
20705239
TAS3_SCHPOtas3genetic
20705239
HRR1_SCHPOhrr1genetic
20705239
CID12_SCHPOcid12genetic
20705239
RDP1_SCHPOrdp1genetic
20705239
CLR4_SCHPOclr4genetic
20705239
NUP61_SCHPOnup61genetic
18818364
BMT5_SCHPOSPCC1919.13cgenetic
18818364
SET1_SCHPOset1genetic
18818364
CCR4_SCHPOccr4genetic
18818364
MU154_SCHPOmug154genetic
18818364
SWC5_SCHPOswc5genetic
18818364
VPH2_SCHPOvph2genetic
18818364
ERS1_SCHPOers1genetic
18818364
HRR1_SCHPOhrr1genetic
18818364
RAF1_SCHPOraf1genetic
18818364
AGO1_SCHPOago1genetic
18818364
RAF2_SCHPOraf2genetic
18818364
RAF1_SCHPOraf1physical
22319459
CLR4_SCHPOclr4physical
22319459
RAF1_SCHPOraf1physical
20211136
PEX10_SCHPOpas4genetic
22681890
DDB1_SCHPOddb1genetic
22681890
YAI5_SCHPOSPAC24B11.05genetic
22681890
ARB1_SCHPOarb1genetic
22681890
MPC2_SCHPOmpc2genetic
22681890
MPH1L_SCHPOmph1genetic
22681890
RYH1_SCHPOryh1genetic
22681890
VHT1_SCHPOvht1genetic
22681890
ISU1_SCHPOisu1genetic
22681890
FLP1_SCHPOclp1genetic
22681890
LAF1_SCHPOlaf1genetic
22681890
PCK1_SCHPOpck1genetic
22681890
NU132_SCHPOnup132genetic
22681890
SCE3_SCHPOsce3genetic
22681890
FIN1_SCHPOfin1genetic
22681890
BUB3_SCHPObub3genetic
22681890
YM08_SCHPOSPAC212.08cgenetic
22681890
SDS23_SCHPOsds23genetic
22681890
PLR1_SCHPOplr1genetic
22681890
PAC2_SCHPOpac2genetic
22681890
MCA1_SCHPOpca1genetic
22681890
YCGK_SCHPOSPCC16C4.20cgenetic
22681890
G3P2_SCHPOgpd3genetic
22681890
RAF2_SCHPOraf2genetic
22681890
PYP1_SCHPOpyp1genetic
22681890
ELP6_SCHPOelp6genetic
22681890
PROB_SCHPOSPAC17H9.13cgenetic
22681890
ERFB_SCHPOerf2genetic
22681890
RT109_SCHPOrtt109genetic
22681890
YJ95_SCHPOdbl5genetic
22681890
MGR2_SCHPOmgr2genetic
22681890
YAC5_SCHPOcph1genetic
22681890
UFD2_SCHPOufd2genetic
22681890
DBR1_SCHPOdbr1genetic
22681890
RAD55_SCHPOrad55genetic
22681890
XPOT_SCHPOlos1genetic
22681890
VIP1_SCHPOasp1genetic
22681890
DCC1_SCHPOdcc1genetic
22681890
PPK8_SCHPOppk8genetic
22681890
CLR4_SCHPOclr4genetic
22681890
SEY1_SCHPOSPAC222.14cgenetic
22681890
YF98_SCHPOnht10genetic
22681890
YLO2_SCHPOtma23genetic
22681890
CHP1_SCHPOchp1genetic
22681890
PNPP_SCHPOpho2genetic
22681890
DAD1_SCHPOdad1genetic
22681890
YC1B_SCHPOmsy1genetic
22681890
SNF5_SCHPOsnf5genetic
22681890
YI13_SCHPOSPAC521.03genetic
22681890
FTA6_SCHPOfta6genetic
22681890
SWD1_SCHPOswd1genetic
22681890
ZIP1_SCHPOzip1genetic
22681890
YAJE_SCHPOSPAC30D11.14cgenetic
22681890
GSK3_SCHPOgsk3genetic
22681890
CWF17_SCHPOspf38genetic
22681890
MAL3_SCHPOmal3genetic
22681890
YAQD_SCHPOSPAC18G6.13genetic
22681890
TMA20_SCHPOtma20genetic
22681890
MUG80_SCHPOmug80genetic
22681890
YJD4_SCHPOSPCC594.04cgenetic
22681890
ARP42_SCHPOarp42genetic
22681890
MFM3_SCHPOmfm3genetic
22681890
CHL1_SCHPOchl1genetic
22681890
PHD1_SCHPOhos2genetic
22681890
RL43B_SCHPOrpl4302genetic
22681890
PSL1_SCHPOpsl1genetic
22681890
SGO1_SCHPOsgo1genetic
22681890
NU124_SCHPOnup124genetic
22681890
SSN3_SCHPOsrb10genetic
22681890
APQ12_SCHPOapq12genetic
22681890
MSH6_SCHPOmsh6genetic
22681890
YDHE_SCHPOSPAC6G9.14genetic
22681890
YE98_SCHPOerp2genetic
22681890
HPM1_SCHPOSPAC1071.05genetic
22681890
HASP_SCHPOhrk1genetic
22681890
AROG_SCHPOSPAP8A3.07cgenetic
22681890
RHO2_SCHPOrho2genetic
22681890
YNW5_SCHPOyar1genetic
22681890
ELP3_SCHPOelp3genetic
22681890
PPZ_SCHPOpzh1genetic
22681890
FKBP4_SCHPOfkbp39genetic
22681890
ADN2_SCHPOadn2genetic
22681890
PYRD_SCHPOura3genetic
22681890
NACB_SCHPObtf3genetic
22681890
YGVA_SCHPOdef1genetic
22681890
MAD2_SCHPOmad2genetic
22681890
RAF1_SCHPOraf1genetic
22681890
ELP1_SCHPOelp1genetic
22681890
GAR2_SCHPOgar2genetic
22681890
RSSA1_SCHPOrps001genetic
22681890
PDS5_SCHPOpds5genetic
22681890
CLR3_SCHPOclr3genetic
22681890
MU172_SCHPOmsd1genetic
22681890
YOW5_SCHPOSPBC1861.05genetic
22681890
RDP1_SCHPOrdp1genetic
22681890
RL27A_SCHPOrpl2701genetic
22681890
MED1_SCHPOpmc2genetic
22681890
PTPA1_SCHPOypa1genetic
22681890
TSR4_SCHPOSPBC25H2.15genetic
22681890
EME1_SCHPOeme1genetic
22681890
ASK1_SCHPOask1genetic
22681890
GLD1_SCHPOgld1genetic
22681890
YBPD_SCHPOSPBC16H5.13genetic
22681890
PPID_SCHPOwis2genetic
22681890
YI75_SCHPOSPAC977.05cgenetic
22681890
YORS_SCHPOstc1genetic
22681890
RDS1_SCHPOrds1genetic
22681890
RAP1_SCHPOrap1genetic
22681890
RL17B_SCHPOrpl1702genetic
22681890
RPB9_SCHPOrpb9genetic
22681890
SUM2_SCHPOsum2genetic
22681890
DAD2_SCHPOdad2genetic
22681890
YHZ3_SCHPOath1genetic
22681890
IWR1_SCHPOiwr1genetic
22681890
YH73_SCHPOSPBC16G5.03genetic
22681890
BIS1_SCHPObis1genetic
22681890
TBA2_SCHPOatb2genetic
22681890
IMA2_SCHPOimp1genetic
22681890
YH24_SCHPOSPBC1A4.04genetic
22681890
SPM1_SCHPOpmk1genetic
22681890
CTU2_SCHPOctu2genetic
22681890
MU154_SCHPOmug154genetic
22681890
RL9A_SCHPOrpl901genetic
22681890
TFS2_SCHPOtfs1genetic
22681890
YK42_SCHPOtos4genetic
22681890
MPC1_SCHPOmpc1genetic
22681890
YFE6_SCHPOgmh5genetic
22681890
MCL1_SCHPOmcl1genetic
22681890
CSK1_SCHPOcsk1genetic
22681890
YKJ7_SCHPOSPAC513.07genetic
22681890
CTU1_SCHPOctu1genetic
22681890
RS8A_SCHPOrps801genetic
22681890
ASE1_SCHPOase1genetic
22681890
YGK5_SCHPOSPBC725.05cgenetic
22681890
MOC3_SCHPOmoc3genetic
22681890
TCG1_SCHPOtcg1genetic
22681890
MUG73_SCHPOmug73genetic
22681890
RAF1_SCHPOraf1physical
24449894
RAF2_SCHPOraf2physical
24449894
CUL4_SCHPOpcu4physical
24449894
XRN2_SCHPOdhp1physical
26631744
RIK1_SCHPOrik1physical
26771498
RAF1_SCHPOraf1physical
26771498
CCQ1_SCHPOccq1physical
26988418

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RIK1_SCHPO

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Related Literatures of Post-Translational Modification

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