RAF1_SCHPO - dbPTM
RAF1_SCHPO - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RAF1_SCHPO
UniProt AC O74910
Protein Name Rik1-associated factor 1
Gene Name raf1
Organism Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
Sequence Length 638
Subcellular Localization Cytoplasm. Nucleus.
Protein Description Component of the rik1-associated E3 ubiquitin ligase complex that shows ubiquitin ligase activity and is required for histone H3K9 methylation. H3K9me represents a specific tag for epigenetic transcriptional repression by recruiting swi6/HP1 to methylated histones which leads to transcriptional silencing within centromeric heterochromatin, telomeric regions and at the silent mating-type loci. Has a role in both mitotic and meiotic chromosome segregation..
Protein Sequence MTNSSPRVKRRTDTQYLHSVSSKLPKVDFDTNNEEFFEEEFEIYDPFYRAELPCPKPSLSISKHSIAKVPSNVNKRLELQLLLTSGTFLPNSRPYLSERVRKHTHLLSNSITGDDKPSLIHVDFTPEECFILQEAKLKFGPVNSVQFNDAYSTHISPKLPGRAYEDCQKFEIDNPSLSPVDKHGAIILRTYKKNKKLLPDYLKSFYNAGSSYFQREQVHQLMDGESVFFLKPWKHFNETSGDTVCVAYNPLCEKFALGSTAQDGAYNRLGNLWIGDFHSETIQSLESHYKLNQVGEKEYSTISDLCFSKGNLFLYTGAFDNAVKVWDMEGNLCGIFNAPTDYIHKLALSDDDLLAVACKNGYGYLLSTDNSTGEILTSANLIYPEALEKGYSASLIEFSNFLGRSSDKVIIGYDSFHTSNNRGCLALFDASTASFVQKFNTADEAFTSLYMHPSQVGFVASSNTLSNGRVYYLDTRMYKVCLNFTTTQKDINHATISNSGILVTSSGTDNQTFVWDSRKPDKPLSLLKHGKTKMIHFDGANEEEVDAGINMAQWQPKGNLFVTGGSDGIVKVWDLRLNNPFIQNFTEMNSAITYGGFSEDASKLTVCCVGGDVNMYSLGNDNGNKFGEFRIIENRLLT
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
563PhosphorylationPKGNLFVTGGSDGIV
CCCCEEEECCCCCEE
28.6125720772
566PhosphorylationNLFVTGGSDGIVKVW
CEEEECCCCCEEEEE
33.7325720772

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RAF1_SCHPO !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RAF1_SCHPO !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RAF1_SCHPO !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
RAF2_SCHPOraf2physical
16040243
RIK1_SCHPOrik1physical
16040243
NU189_SCHPOnup189physical
16157682
YC8F_SCHPOSPCC622.15cgenetic
18818364
ALP14_SCHPOalp14genetic
18818364
JHD1_SCHPOepe1genetic
18818364
YLP3_SCHPOred1physical
22144463
RIK1_SCHPOrik1physical
22319459
CLR4_SCHPOclr4physical
22319459
RIK1_SCHPOrik1genetic
22681890
LCL3_SCHPOlcl3genetic
22681890
ADN3_SCHPOadn3genetic
22681890
ARB1_SCHPOarb1genetic
22681890
MPH1L_SCHPOmph1genetic
22681890
NSE6_SCHPOnse6genetic
22681890
MU115_SCHPOmug115genetic
22681890
PROD_SCHPOSPCC70.03cgenetic
22681890
YF15_SCHPOSPAC9E9.05genetic
22681890
FLP1_SCHPOclp1genetic
22681890
LAF1_SCHPOlaf1genetic
22681890
NU132_SCHPOnup132genetic
22681890
FIN1_SCHPOfin1genetic
22681890
SSR3_SCHPOssr3genetic
22681890
BUB3_SCHPObub3genetic
22681890
SDS23_SCHPOsds23genetic
22681890
DPH3_SCHPOdph3genetic
22681890
PAC2_SCHPOpac2genetic
22681890
G3P2_SCHPOgpd3genetic
22681890
ELP6_SCHPOelp6genetic
22681890
RFA3_SCHPOssb3genetic
22681890
MED19_SCHPOrox3genetic
22681890
RT109_SCHPOrtt109genetic
22681890
CSK2C_SCHPOckb2genetic
22681890
CTBL1_SCHPOSPAC1952.06cgenetic
22681890
PPK27_SCHPOppk27genetic
22681890
YJ03_SCHPOrhn1genetic
22681890
YFH9_SCHPOSPAC23A1.09genetic
22681890
ALG6_SCHPOalg6genetic
22681890
YAC5_SCHPOcph1genetic
22681890
DBR1_SCHPOdbr1genetic
22681890
ATG18_SCHPOatg1801genetic
22681890
RAD55_SCHPOrad55genetic
22681890
CIP1_SCHPOcip1genetic
22681890
CCQ1_SCHPOccq1genetic
22681890
RPA12_SCHPOrpa12genetic
22681890
CLR4_SCHPOclr4genetic
22681890
NEM1_SCHPOnem1genetic
22681890
YF98_SCHPOnht10genetic
22681890
YLO2_SCHPOtma23genetic
22681890
CHP1_SCHPOchp1genetic
22681890
PNPP_SCHPOpho2genetic
22681890
HRQ1_SCHPOhrq1genetic
22681890
U390_SCHPOSPCC24B10.18genetic
22681890
MBO1_SCHPOmto1genetic
22681890
CG121_SCHPOcgi121genetic
22681890
DAD1_SCHPOdad1genetic
22681890
POP2_SCHPOpop2genetic
22681890
IST1_SCHPOist1genetic
22681890
SNF5_SCHPOsnf5genetic
22681890
RTF_SCHPOrtf1genetic
22681890
CWF17_SCHPOspf38genetic
22681890
MAL3_SCHPOmal3genetic
22681890
COM1_SCHPOctp1genetic
22681890
YAQD_SCHPOSPAC18G6.13genetic
22681890
CSN1_SCHPOcsn1genetic
22681890
KA113_SCHPOkap113genetic
22681890
YCD2_SCHPOpxd1genetic
22681890
YKX4_SCHPOSPAC328.04genetic
22681890
YM04_SCHPOSPAC212.04cgenetic
22681890
YFT6_SCHPOSPAC926.06cgenetic
22681890
YC8F_SCHPOSPCC622.15cgenetic
22681890
ARP42_SCHPOarp42genetic
22681890
HHP2_SCHPOhhp2genetic
22681890
MFM1_SCHPOmfm1genetic
22681890
CHL1_SCHPOchl1genetic
22681890
YJ48_SCHPOSPCC70.08cgenetic
22681890
YC9F_SCHPOSPCC584.15cgenetic
22681890
SGF73_SCHPOsgf73genetic
22681890
RAD57_SCHPOrad57genetic
22681890
RRG9_SCHPOrrg9genetic
22681890
YCHC_SCHPOSPCC645.12cgenetic
22681890
SEC63_SCHPOsec63genetic
22681890
ANM3_SCHPOrmt3genetic
22681890
SET11_SCHPOset11genetic
22681890
PFD3_SCHPOpac10genetic
22681890
JHD1_SCHPOepe1genetic
22681890
SRK1_SCHPOsrk1genetic
22681890
APQ12_SCHPOapq12genetic
22681890
MSH6_SCHPOmsh6genetic
22681890
YDHE_SCHPOSPAC6G9.14genetic
22681890
PANE_SCHPOSPBPB2B2.09cgenetic
22681890
HASP_SCHPOhrk1genetic
22681890
ALG5_SCHPOalg5genetic
22681890
GNR1_SCHPOgnr1genetic
22681890
YNW5_SCHPOyar1genetic
22681890
ELP3_SCHPOelp3genetic
22681890
UBC14_SCHPOubc14genetic
22681890
ERS1_SCHPOers1genetic
22681890
PPZ_SCHPOpzh1genetic
22681890
EXG1_SCHPOexg1genetic
22681890
FKBP4_SCHPOfkbp39genetic
22681890
ADN2_SCHPOadn2genetic
22681890
UBP3_SCHPOubp3genetic
22681890
MAD2_SCHPOmad2genetic
22681890
NRDE2_SCHPOnrl1genetic
22681890
ELP1_SCHPOelp1genetic
22681890
GAR2_SCHPOgar2genetic
22681890
PDS5_SCHPOpds5genetic
22681890
CLR3_SCHPOclr3genetic
22681890
MU172_SCHPOmsd1genetic
22681890
RDP1_SCHPOrdp1genetic
22681890
ROK1_SCHPOrok1genetic
22681890
YJ53_SCHPOSPCC4F11.03cgenetic
22681890
YHI5_SCHPOabo2genetic
22681890
MED1_SCHPOpmc2genetic
22681890
PTPA1_SCHPOypa1genetic
22681890
CTK3_SCHPOlsg1genetic
22681890
EME1_SCHPOeme1genetic
22681890
PPK16_SCHPOppk16genetic
22681890
ASK1_SCHPOask1genetic
22681890
YFY7_SCHPOSPAC9.07cgenetic
22681890
RPB9_SCHPOrpb9genetic
22681890
TRM6_SCHPOgcd10genetic
22681890
DAD2_SCHPOdad2genetic
22681890
YHZ3_SCHPOath1genetic
22681890
YA99_SCHPOSPAC13G6.09genetic
22681890
H2AZ_SCHPOpht1genetic
22681890
IWR1_SCHPOiwr1genetic
22681890
YAY1_SCHPOSPAC4H3.01genetic
22681890
CGM2_SCHPOmcs2genetic
22681890
YAS5_SCHPOmms1genetic
22681890
TBA2_SCHPOatb2genetic
22681890
SPM1_SCHPOpmk1genetic
22681890
CTU2_SCHPOctu2genetic
22681890
RL9A_SCHPOrpl901genetic
22681890
TFS2_SCHPOtfs1genetic
22681890
SPN2_SCHPOspn2genetic
22681890
YFE6_SCHPOgmh5genetic
22681890
YC8E_SCHPOSPCC622.14genetic
22681890
MCL1_SCHPOmcl1genetic
22681890
FYV10_SCHPOSPBC106.13genetic
22681890
MUG82_SCHPOpth4genetic
22681890
ARC1_SCHPOSPAC30C2.04genetic
22681890
MKH1_SCHPOmkh1genetic
22681890
CTU1_SCHPOctu1genetic
22681890
YETC_SCHPOSPAC8C9.12cgenetic
22681890
YCV4_SCHPOSPCC777.04genetic
22681890
RS8A_SCHPOrps801genetic
22681890
ASE1_SCHPOase1genetic
22681890
APS1_SCHPOaps1genetic
22681890
PPK2_SCHPOtea5genetic
22681890
YOX1_SCHPOyox1genetic
22681890
MOC3_SCHPOmoc3genetic
22681890
TCG1_SCHPOtcg1genetic
22681890
LONM_SCHPOlon1genetic
22681890
MIS6_SCHPOmis6genetic
23267073
RAF2_SCHPOraf2physical
24449894
RIK1_SCHPOrik1physical
24449894

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RAF1_SCHPO

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Related Literatures of Post-Translational Modification

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