RPB9_SCHPO - dbPTM
RPB9_SCHPO - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RPB9_SCHPO
UniProt AC O74635
Protein Name DNA-directed RNA polymerase II subunit RPB9
Gene Name rpb9
Organism Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
Sequence Length 113
Subcellular Localization Nucleus, nucleolus .
Protein Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB9 is part of the upper jaw surrounding the central large cleft and thought to grab the incoming DNA template (By similarity). Involved in the regulation of transcription elongation..
Protein Sequence MSNFQYCIECNNMLYPREDKVDRVLRLACRNCDYSEIAATSKVYRHELQSSNVENTTVSHDASTDPTLPRSDKECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVHCGFAFEEQ
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster

Oops, there are no PTM records of RPB9_SCHPO !!

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RPB9_SCHPO !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RPB9_SCHPO !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RPB9_SCHPO !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
REB1_SCHPOreb1genetic
18818364
H2AZ_SCHPOpht1genetic
18818364
ASH2_SCHPOash2genetic
18818364
YBPD_SCHPOSPBC16H5.13genetic
18818364
COPE_SCHPOsec28genetic
18818364
PLMT_SCHPOcho1genetic
18818364
AIR1_SCHPOair1genetic
18818364
PP2C2_SCHPOptc2genetic
18818364
YQ9A_SCHPOSPCC18.10genetic
18818364
SDC1_SCHPOsdc1genetic
18818364
TRM82_SCHPOSPCC18.13genetic
18818364
BMT5_SCHPOSPCC1919.13cgenetic
18818364
VPH2_SCHPOvph2genetic
18818364
PPK23_SCHPOcdk11genetic
18818364
MAD1_SCHPOmad1genetic
18818364
CLR4_SCHPOclr4genetic
18818364
TAS3_SCHPOtas3genetic
18818364
RIK1_SCHPOrik1genetic
18818364
HRR1_SCHPOhrr1genetic
18818364
DCR1_SCHPOdcr1genetic
18818364
RAF1_SCHPOraf1genetic
18818364
AGO1_SCHPOago1genetic
18818364
RAF2_SCHPOraf2genetic
18818364
RIK1_SCHPOrik1genetic
22681890
AMPD_SCHPOada1genetic
22681890
IDHP_SCHPOidp1genetic
22681890
6PGL_SCHPOSPCC16C4.10genetic
22681890
YN1B_SCHPOSPBC577.11genetic
22681890
YQJ9_SCHPOSPCC1840.09genetic
22681890
MFR1_SCHPOmfr1genetic
22681890
EIF2A_SCHPOSPBC4B4.04genetic
22681890
RAF2_SCHPOraf2genetic
22681890
LUB1_SCHPOlub1genetic
22681890
VAM7_SCHPOSPCC594.06cgenetic
22681890
SPN3_SCHPOspn3genetic
22681890
YEM8_SCHPOclr5genetic
22681890
PDX1_SCHPOsnz1genetic
22681890
YJ03_SCHPOrhn1genetic
22681890
RAD55_SCHPOrad55genetic
22681890
DEP1_SCHPOdep1genetic
22681890
YK82_SCHPObdf2genetic
22681890
PAM17_SCHPOpam17genetic
22681890
TRMB_SCHPOtrm8genetic
22681890
CLR4_SCHPOclr4genetic
22681890
CWF16_SCHPOcwf16genetic
22681890
SNF5_SCHPOsnf5genetic
22681890
GYP1_SCHPOgyp1genetic
22681890
ZRG17_SCHPOzrg17genetic
22681890
PYRE_SCHPOura5genetic
22681890
BCA1_SCHPOeca39genetic
22681890
YBPC_SCHPOSPBC16H5.12cgenetic
22681890
ASH2_SCHPOash2genetic
22681890
PNK1_SCHPOpnk1genetic
22681890
SSN3_SCHPOsrb10genetic
22681890
SOL1_SCHPOsol1genetic
22681890
SNT2_SCHPOsnt2genetic
22681890
TR112_SCHPOtrm112genetic
22681890
YO48_SCHPOSPBC36B7.08cgenetic
22681890
AATM_SCHPOSPBC725.01genetic
22681890
CAPZB_SCHPOacp2genetic
22681890
ADN2_SCHPOadn2genetic
22681890
RAF1_SCHPOraf1genetic
22681890
ELP1_SCHPOelp1genetic
22681890
YBKD_SCHPOgmh6genetic
22681890
MTG1_SCHPOmtg1genetic
22681890
RL16B_SCHPOrpl1601genetic
22681890
SHR3_SCHPOpsh3genetic
22681890
TRM82_SCHPOSPCC18.13genetic
22681890
TRM6_SCHPOgcd10genetic
22681890
ARV1_SCHPOarv1genetic
22681890
H2AZ_SCHPOpht1genetic
22681890
YHEI_SCHPOSPBPB2B2.18genetic
22681890
IMA2_SCHPOimp1genetic
22681890
YOHB_SCHPOrbd1genetic
22681890
TSC1_SCHPOtsc1genetic
22681890
ASE1_SCHPOase1genetic
22681890
CSN5_SCHPOcsn5genetic
22681890
YNT3_SCHPOSPBC9B6.03genetic
22681890
VTS1_SCHPOSPBC13E7.03cphysical
26771498
YH7G_SCHPOSPBC16G5.16physical
26771498
RAN1_SCHPOran1physical
26771498
SOL1_SCHPOsol1physical
26771498
HAP5_SCHPOphp5physical
26771498
MDE7_SCHPOmde7physical
26771498
MMI1_SCHPOmmi1physical
26771498

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RPB9_SCHPO

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Related Literatures of Post-Translational Modification

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