SIP2_YEAST - dbPTM
SIP2_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID SIP2_YEAST
UniProt AC P34164
Protein Name SNF1 protein kinase subunit beta-2
Gene Name SIP2
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 415
Subcellular Localization Cytoplasm . Cell membrane
Peripheral membrane protein
Cytoplasmic side . Resides in the cytosol during growth in glucose. Excluded from the nucleus. There is an age-associated shift in localization from the plasma membrane to the cytoplasm.
Protein Description Beta subunit of the SNF1 kinase complex, which is required for transcriptional, metabolic, and developmental adaptations in response to glucose limitation. Has a structural role, mediating heterotrimer formation, and a regulatory role, defining carbon source-regulated subcellular location and substrate specificity of the SNF1 kinase complex. Involved in the regulation of aging. Acts as a negative regulator of nuclear SNF1 activity in young cells by sequestering its activating gamma subunit at the plasma membrane..
Protein Sequence MGTTTSHPAQKKQTTKKCRAPIMSDVREKPSNAQGCEPQEMDAVSKKVTELSLNKCSDSQDAGQPSREGSITKKKSTLLLRDEDEPTMPKLSVMETAVDTDSGSSSTSDDEEGDIIAQTTEPKQDASPDDDRSGHSSPREEGQQQIRAKEASGGPSEIKSSLMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDSDNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPTATDQMGNFVNYIEVRQPEKNPTNEKIRSKEADSMRPPTSDRSSIALQIGKDPDDFGDGYTRFHEDLSPRPPLEYTTDIPAVFTDPSVMERYYYTLDRQQSNTDTSWLTPPQLPPQLENVILNKYYATQDQFNENNSGALPIPNHVVLNHLVTSSIKHNTLCVASIVRYKQKYVTQILYTPIESS
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
2N-myristoyl glycine------MGTTTSHPA
------CCCCCCCHH
31.59-
2Myristoylation------MGTTTSHPA
------CCCCCCCHH
31.5912562756
3Phosphorylation-----MGTTTSHPAQ
-----CCCCCCCHHH
26.1228889911
4Phosphorylation----MGTTTSHPAQK
----CCCCCCCHHHH
22.1430377154
5Phosphorylation---MGTTTSHPAQKK
---CCCCCCCHHHHC
25.5230377154
6Phosphorylation--MGTTTSHPAQKKQ
--CCCCCCCHHHHCC
25.9430377154
12AcetylationTSHPAQKKQTTKKCR
CCCHHHHCCCCCCCC
40.5721906795
16AcetylationAQKKQTTKKCRAPIM
HHHCCCCCCCCCCCC
53.9521906795
17AcetylationQKKQTTKKCRAPIMS
HHCCCCCCCCCCCCH
27.1921906795
29UbiquitinationIMSDVREKPSNAQGC
CCHHHCCCCCCCCCC
43.0923749301
45PhosphorylationPQEMDAVSKKVTELS
HHHHHHHHHHHHHHH
28.6021551504
49PhosphorylationDAVSKKVTELSLNKC
HHHHHHHHHHHHHCC
39.8422369663
52PhosphorylationSKKVTELSLNKCSDS
HHHHHHHHHHCCCCC
24.5422369663
55UbiquitinationVTELSLNKCSDSQDA
HHHHHHHCCCCCCCC
40.1723749301
57PhosphorylationELSLNKCSDSQDAGQ
HHHHHCCCCCCCCCC
41.7422369663
59PhosphorylationSLNKCSDSQDAGQPS
HHHCCCCCCCCCCCC
17.4222369663
66PhosphorylationSQDAGQPSREGSITK
CCCCCCCCCCCCCCC
34.7722369663
70PhosphorylationGQPSREGSITKKKST
CCCCCCCCCCCCEEE
23.4922369663
72PhosphorylationPSREGSITKKKSTLL
CCCCCCCCCCEEEEE
38.2122369663
76PhosphorylationGSITKKKSTLLLRDE
CCCCCCEEEEEECCC
32.9222369663
77PhosphorylationSITKKKSTLLLRDED
CCCCCEEEEEECCCC
30.2422369663
87PhosphorylationLRDEDEPTMPKLSVM
ECCCCCCCCCCEEEE
44.0222369663
127PhosphorylationTEPKQDASPDDDRSG
CCCCCCCCCCCCCCC
36.8329136822
133PhosphorylationASPDDDRSGHSSPRE
CCCCCCCCCCCCCCH
48.1017563356
136PhosphorylationDDDRSGHSSPREEGQ
CCCCCCCCCCCHHHH
45.6329136822
137PhosphorylationDDRSGHSSPREEGQQ
CCCCCCCCCCHHHHH
23.4617563356
152PhosphorylationQIRAKEASGGPSEIK
HHHHHHHCCCCCCCC
45.4325752575
160PhosphorylationGGPSEIKSSLMVPVE
CCCCCCCCEEEEEEE
34.0722369663
161PhosphorylationGPSEIKSSLMVPVEI
CCCCCCCEEEEEEEE
18.5822369663
182PhosphorylationSKVYVTGSFTKWRKM
CEEEEEECCCCHHHE
22.0027214570
256AcetylationEKNPTNEKIRSKEAD
CCCCCCHHHCHHHHH
45.5521906795
273PhosphorylationRPPTSDRSSIALQIG
CCCCCCCHHEEHHCC
30.9628889911
274PhosphorylationPPTSDRSSIALQIGK
CCCCCCHHEEHHCCC
16.8728889911
298PhosphorylationTRFHEDLSPRPPLEY
CCCCCCCCCCCCCCC
31.0512562756
305PhosphorylationSPRPPLEYTTDIPAV
CCCCCCCCCCCCCCC
23.7119779198
306PhosphorylationPRPPLEYTTDIPAVF
CCCCCCCCCCCCCCC
14.4919779198
307PhosphorylationRPPLEYTTDIPAVFT
CCCCCCCCCCCCCCC
30.9119779198
331PhosphorylationYTLDRQQSNTDTSWL
EECCCCCCCCCCCCC
33.1030377154
354UbiquitinationLENVILNKYYATQDQ
HHHHHHHHHCCCHHH
35.8717644757

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of SIP2_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of SIP2_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of SIP2_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
SNF1_YEASTSNF1physical
11805837
TCPA_YEASTTCP1physical
11805837
PMM_YEASTSEC53physical
11805837
GAL83_YEASTGAL83physical
11805837
ARPC2_YEASTARC35physical
11805837
AAKG_YEASTSNF4physical
11805837
IDH2_YEASTIDH2physical
11805837
AAKG_YEASTSNF4physical
10688190
AP1_YEASTYAP1physical
12582119
SNF1_YEASTSNF1physical
9121458
AAKG_YEASTSNF4physical
9121458
GAL83_YEASTGAL83genetic
14673168
GAL83_YEASTGAL83genetic
14993292
GAL83_YEASTGAL83genetic
10990457
GAL83_YEASTGAL83genetic
12556493
SNF1_YEASTSNF1physical
16429126
AAKG_YEASTSNF4physical
16429126
SNF1_YEASTSNF1physical
18719252
AAKG_YEASTSNF4physical
18719252
PHB2_YEASTPHB2physical
20489023
SNF1_YEASTSNF1physical
20489023
AAKG_YEASTSNF4physical
20489023
GAL83_YEASTGAL83genetic
20545859
SWA2_YEASTSWA2genetic
20526336
VHS1_YEASTVHS1physical
21460040
SIR2_YEASTSIR2genetic
21902802
RPD3_YEASTRPD3genetic
21906795
SNF1_YEASTSNF1physical
21906795
SCH9_YEASTSCH9genetic
21906795
GAL83_YEASTGAL83genetic
24486034
GAL83_YEASTGAL83genetic
25116136
GAL83_YEASTGAL83genetic
26394309
MCM1_YEASTMCM1genetic
27708008
CLP1_YEASTCLP1genetic
27708008
BLM10_YEASTBLM10genetic
27708008
MSC7_YEASTMSC7genetic
27708008
CUE2_YEASTCUE2genetic
27708008
ATG10_YEASTATG10genetic
27708008
XYL2_YEASTXYL2genetic
27708008
SWI6_YEASTSWI6genetic
27708008
YET2_YEASTYET2genetic
27708008
RM44_YEASTMRPL44genetic
27708008
SIW14_YEASTSIW14genetic
27708008
CARME_YEASTYNL092Wgenetic
27708008
YNN4_YEASTYNL134Cgenetic
27708008
KIN4_YEASTKIN4genetic
27708008
PHR_YEASTPHR1genetic
27708008
MET31_YEASTMET31genetic
27708008
PRP11_YEASTPRP11genetic
27708008
PDC2_YEASTPDC2genetic
27708008
RSP5_YEASTRSP5genetic
27708008
CDC4_YEASTCDC4genetic
27708008
ACT_YEASTACT1genetic
27708008
CDC6_YEASTCDC6genetic
27708008
DPOD2_YEASTPOL31genetic
27708008
SEC12_YEASTSEC12genetic
27708008
DBP6_YEASTDBP6genetic
27708008
TYSY_YEASTCDC21genetic
27708008
SEC62_YEASTSEC62genetic
27708008
TBF1_YEASTTBF1genetic
27708008
DIM1_YEASTDIM1genetic
27708008
DIB1_YEASTDIB1genetic
27708008
LTE1_YEASTLTE1genetic
27708008
UBC4_YEASTUBC4genetic
27708008
RIM15_YEASTRIM15genetic
27708008
PUR4_YEASTADE6genetic
27708008
ECM34_YEASTECM34genetic
27708008
SPO12_YEASTSPO12genetic
27708008
THP2_YEASTTHP2genetic
27708008
RPN10_YEASTRPN10genetic
27708008
SYG1_YEASTSYG1genetic
27708008
SDP1_YEASTSDP1genetic
27708008
POG1_YEASTPOG1genetic
27708008
MET3_YEASTMET3genetic
27708008
YJ24_YEASTKCH1genetic
27708008
DAN1_YEASTDAN1genetic
27708008
NNRD_YEASTYKL151Cgenetic
27708008
TPO5_YEASTTPO5genetic
27708008
MCH2_YEASTMCH2genetic
27708008
MEH1_YEASTMEH1genetic
27708008
FLO10_YEASTFLO10genetic
27708008
ENT4_YEASTENT4genetic
27708008
VPS13_YEASTVPS13genetic
27708008
UBR2_YEASTUBR2genetic
27708008
APTH1_YEASTYLR118Cgenetic
27708008
HRD3_YEASTHRD3genetic
27708008
YMY9_YEASTYMR099Cgenetic
27708008
YPK2_YEASTYPK2genetic
27708008
YM22_YEASTYMR144Wgenetic
27708008
EAR1_YEASTEAR1genetic
27708008
EF3B_YEASTHEF3genetic
27708008
YNE0_YEASTYNL040Wgenetic
27708008
SWS2_YEASTSWS2genetic
27708008
LEU1_YEASTLEU4genetic
27708008
YNL5_YEASTYNL115Cgenetic
27708008
TEP1_YEASTTEP1genetic
27708008
PFA4_YEASTPFA4genetic
27708008
YO036_YEASTYOL036Wgenetic
27708008
INO4_YEASTINO4genetic
27708008
ZEO1_YEASTZEO1genetic
27708008
ISW2_YEASTISW2genetic
27708008
PMT3_YEASTPMT3genetic
27708008
MRX11_YEASTYPL041Cgenetic
27708008
EF1G1_YEASTCAM1genetic
27708008
TBP6_YEASTYTA6genetic
27708008
RL21B_YEASTRPL21Bgenetic
27708008
SPP1_YEASTSPP1genetic
27708008
PTPA2_YEASTRRD2genetic
27708008
PET20_YEASTPET20genetic
27708008
DAP1_YEASTDAP1genetic
27708008
YP096_YEASTYPR096Cgenetic
27708008
ATG13_YEASTATG13genetic
27708008
GAL83_YEASTGAL83genetic
28760824
MDFI_HUMANMDFIphysical
27107014
KR412_HUMANKRTAP4-12physical
27107014

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of SIP2_YEAST

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Related Literatures of Post-Translational Modification
Myristoylation
ReferencePubMed
"Sip2, an N-myristoylated beta subunit of Snf1 kinase, regulates agingin Saccharomyces cerevisiae by affecting cellular histone kinaseactivity, recombination at rDNA loci, and silencing.";
Lin S.S., Manchester J.K., Gordon J.I.;
J. Biol. Chem. 278:13390-13397(2003).
Cited for: FUNCTION, MYRISTOYLATION AT GLY-2, SUBCELLULAR LOCATION, ANDMUTAGENESIS OF GLY-2.
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-66 AND THR-72, AND MASSSPECTROMETRY.
"Proteome-wide identification of in vivo targets of DNA damagecheckpoint kinases.";
Smolka M.B., Albuquerque C.P., Chen S.H., Zhou H.;
Proc. Natl. Acad. Sci. U.S.A. 104:10364-10369(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-49; SER-52; SER-133 ANDSER-137, AND MASS SPECTROMETRY.
"Analysis of phosphorylation sites on proteins from Saccharomycescerevisiae by electron transfer dissociation (ETD) massspectrometry.";
Chi A., Huttenhower C., Geer L.Y., Coon J.J., Syka J.E.P., Bai D.L.,Shabanowitz J., Burke D.J., Troyanskaya O.G., Hunt D.F.;
Proc. Natl. Acad. Sci. U.S.A. 104:2193-2198(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-76 AND THR-77, AND MASSSPECTROMETRY.

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