NEDD1_HUMAN - dbPTM
NEDD1_HUMAN - PTM Information in dbPTM
Basic Information of Protein
UniProt ID NEDD1_HUMAN
UniProt AC Q8NHV4
Protein Name Protein NEDD1
Gene Name NEDD1
Organism Homo sapiens (Human).
Sequence Length 660
Subcellular Localization Cytoplasm, cytoskeleton, microtubule organizing center, centrosome .
Protein Description Required for mitosis progression. Promotes the nucleation of microtubules from the spindle..
Protein Sequence MQENLRFASSGDDIKIWDASSMTLVDKFNPHTSPHGISSICWSSNNNFLVTASSSGDKIVVSSCKCKPVPLLELAEGQKQTCVNLNSTSMYLVSGGLNNTVNIWDLKSKRVHRSLKDHKDQVTCVTYNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHGSNQSVRHLKYSLFKKSLLGSVSDNGIVTLWDVNSQSPYHNFDSVHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKKLVKTLVADTPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTSVQCIAFQYSTVLTKSSLNKGCSNKPTTVNKRSVNVNAASGGVQNSGIVREAPATSIATVLPQPMTSAMGKGTVAVQEKAGLPRSINTDTLSKETDSGKNQDFSSFDDTGKSSLGDMFSPIRDDAVVNKGSDESIGKGDGFDFLPQLNSVFPPRKNPVTSSTSVLHSSPLNVFMGSPGKEENENRDLTAESKKIYMGKQESKDSFKQLAKLVTSGAESGNLNTSPSSNQTRNSEKFEKPENEIEAQLICEPPINGSSTPNPKIASSVTAGVASSLSEKIADSIGNNRQNAPLTSIQIRFIQNMIQETLDDFREACHRDIVNLQVEMIKQFHMQLNEMHSLLERYSVNEGLVAEIERLREENKRLRAHF
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
4 (in isoform 3)Phosphorylation-21.4524300666
15UbiquitinationASSGDDIKIWDASSM
CCCCCCEEEEECCCC
44.75-
16 (in isoform 3)Phosphorylation-4.0424300666
17 (in isoform 3)Phosphorylation-7.0724300666
65AcetylationKIVVSSCKCKPVPLL
EEEEEECEEEEECEE
47.4425953088
81PhosphorylationLAEGQKQTCVNLNST
ECCCCCCEEEECCCC
26.0022595525
88PhosphorylationTCVNLNSTSMYLVSG
EEEECCCCCEEEEEC
19.2122595525
89PhosphorylationCVNLNSTSMYLVSGG
EEECCCCCEEEEECC
12.7822595525
91PhosphorylationNLNSTSMYLVSGGLN
ECCCCCEEEEECCCC
12.0620068231
94PhosphorylationSTSMYLVSGGLNNTV
CCCEEEEECCCCCCE
25.2520068231
100PhosphorylationVSGGLNNTVNIWDLK
EECCCCCCEEEHHHC
17.5420068231
108PhosphorylationVNIWDLKSKRVHRSL
EEEHHHCCHHHHHHH
32.7522595525
114PhosphorylationKSKRVHRSLKDHKDQ
CCHHHHHHHCCCCCC
25.5420068231
171PhosphorylationSVRHLKYSLFKKSLL
HHHHHHHHHHHHHHH
26.2424719451
176PhosphorylationKYSLFKKSLLGSVSD
HHHHHHHHHHCCCCC
29.44-
180PhosphorylationFKKSLLGSVSDNGIV
HHHHHHCCCCCCCEE
20.58-
182PhosphorylationKSLLGSVSDNGIVTL
HHHHCCCCCCCEEEE
27.36-
215PhosphorylationPASGICFSPVNELLF
CCCCCCCCCHHHEEE
24.4322595525
234PhosphorylationLDKRIILYDTSSKKL
CCCEEEEEECCCHHH
13.5320068231
236PhosphorylationKRIILYDTSSKKLVK
CEEEEEECCCHHHHH
22.7320068231
237PhosphorylationRIILYDTSSKKLVKT
EEEEEECCCHHHHHH
36.9420068231
238PhosphorylationIILYDTSSKKLVKTL
EEEEECCCHHHHHHH
35.5820068231
239AcetylationILYDTSSKKLVKTLV
EEEECCCHHHHHHHH
50.3125953088
243UbiquitinationTSSKKLVKTLVADTP
CCCHHHHHHHHCCCC
46.7221906983
246UbiquitinationKKLVKTLVADTPLTA
HHHHHHHHCCCCCEE
5.69-
247UbiquitinationKLVKTLVADTPLTAV
HHHHHHHCCCCCEEE
20.33-
250UbiquitinationKTLVADTPLTAVDFM
HHHHCCCCCEEEEEC
28.4121906983
271MalonylationAIGSSRGKIYQYDLR
EEECCCCEEEEEEHH
36.8126320211
271UbiquitinationAIGSSRGKIYQYDLR
EEECCCCEEEEEEHH
36.81-
278UbiquitinationKIYQYDLRMLKSPVK
EEEEEEHHHHCCCCE
26.03-
281UbiquitinationQYDLRMLKSPVKTIS
EEEHHHHCCCCEEHH
43.29-
282PhosphorylationYDLRMLKSPVKTISA
EEHHHHCCCCEEHHC
30.8522595525
285UbiquitinationRMLKSPVKTISAHKT
HHHCCCCEEHHCCCC
43.45-
286PhosphorylationMLKSPVKTISAHKTS
HHCCCCEEHHCCCCH
22.0222595525
289PhosphorylationSPVKTISAHKTSVQC
CCCEEHHCCCCHHHE
12.3524719451
292PhosphorylationKTISAHKTSVQCIAF
EEHHCCCCHHHEEEE
25.0230576142
301PhosphorylationVQCIAFQYSTVLTKS
HHEEEEEEEEEECHH
10.3923532336
302PhosphorylationQCIAFQYSTVLTKSS
HEEEEEEEEEECHHH
10.9730576142
303PhosphorylationCIAFQYSTVLTKSSL
EEEEEEEEEECHHHC
18.0130576142
312UbiquitinationLTKSSLNKGCSNKPT
ECHHHCCCCCCCCCC
67.59-
317UbiquitinationLNKGCSNKPTTVNKR
CCCCCCCCCCCCCCC
27.70-
319PhosphorylationKGCSNKPTTVNKRSV
CCCCCCCCCCCCCCC
45.0123532336
325PhosphorylationPTTVNKRSVNVNAAS
CCCCCCCCCCCCCCC
21.4729978859
332PhosphorylationSVNVNAASGGVQNSG
CCCCCCCCCCCCCCC
33.4020860994
338PhosphorylationASGGVQNSGIVREAP
CCCCCCCCCCCEECC
16.8920860994
348O-linked_GlycosylationVREAPATSIATVLPQ
CEECCCCEEEEECCC
16.6030379171
3712-HydroxyisobutyrylationGTVAVQEKAGLPRSI
CEEEEHHHCCCCCCC
30.57-
371UbiquitinationGTVAVQEKAGLPRSI
CEEEEHHHCCCCCCC
30.57-
377PhosphorylationEKAGLPRSINTDTLS
HHCCCCCCCCCCCCC
20.4625159151
378UbiquitinationKAGLPRSINTDTLSK
HCCCCCCCCCCCCCC
7.31-
382PhosphorylationPRSINTDTLSKETDS
CCCCCCCCCCCCCCC
30.7819509060
384PhosphorylationSINTDTLSKETDSGK
CCCCCCCCCCCCCCC
30.4527251275
385UbiquitinationINTDTLSKETDSGKN
CCCCCCCCCCCCCCC
68.68-
387PhosphorylationTDTLSKETDSGKNQD
CCCCCCCCCCCCCCC
38.9222595525
389PhosphorylationTLSKETDSGKNQDFS
CCCCCCCCCCCCCCC
60.1222595525
391UbiquitinationSKETDSGKNQDFSSF
CCCCCCCCCCCCCCC
56.2221906983
396PhosphorylationSGKNQDFSSFDDTGK
CCCCCCCCCCCCCCC
38.0825159151
397PhosphorylationGKNQDFSSFDDTGKS
CCCCCCCCCCCCCCC
32.4625159151
398UbiquitinationKNQDFSSFDDTGKSS
CCCCCCCCCCCCCCC
10.7721906983
401PhosphorylationDFSSFDDTGKSSLGD
CCCCCCCCCCCCCCC
48.6425159151
404PhosphorylationSFDDTGKSSLGDMFS
CCCCCCCCCCCCCCC
31.9425159151
405PhosphorylationFDDTGKSSLGDMFSP
CCCCCCCCCCCCCCC
39.6025159151
411PhosphorylationSSLGDMFSPIRDDAV
CCCCCCCCCCCCCCE
16.8730266825
412PhosphorylationSLGDMFSPIRDDAVV
CCCCCCCCCCCCCEE
17.8627251275
418PhosphorylationSPIRDDAVVNKGSDE
CCCCCCCEEECCCCC
6.6624719451
423PhosphorylationDAVVNKGSDESIGKG
CCEEECCCCCCCCCC
39.5522199227
426PhosphorylationVNKGSDESIGKGDGF
EECCCCCCCCCCCCC
41.4522199227
429UbiquitinationGSDESIGKGDGFDFL
CCCCCCCCCCCCCCH
52.76-
451PhosphorylationPPRKNPVTSSTSVLH
CCCCCCCCCCCEEEC
20.4427174698
452PhosphorylationPRKNPVTSSTSVLHS
CCCCCCCCCCEEECC
31.6725159151
453PhosphorylationRKNPVTSSTSVLHSS
CCCCCCCCCEEECCC
18.4822496350
454PhosphorylationKNPVTSSTSVLHSSP
CCCCCCCCEEECCCC
23.7127174698
455PhosphorylationNPVTSSTSVLHSSPL
CCCCCCCEEECCCCC
25.3222199227
459PhosphorylationSSTSVLHSSPLNVFM
CCCEEECCCCCEEEC
29.5030576142
460PhosphorylationSTSVLHSSPLNVFMG
CCEEECCCCCEEECC
23.7421815630
468PhosphorylationPLNVFMGSPGKEENE
CCEEECCCCCCHHCC
20.7725159151
480PhosphorylationENENRDLTAESKKIY
HCCCCCCCHHHHHHH
32.4430576142
483PhosphorylationNRDLTAESKKIYMGK
CCCCCHHHHHHHCCC
36.4630576142
487PhosphorylationTAESKKIYMGKQESK
CHHHHHHHCCCCCCH
14.54-
493O-linked_GlycosylationIYMGKQESKDSFKQL
HHCCCCCCHHHHHHH
38.9930379171
493PhosphorylationIYMGKQESKDSFKQL
HHCCCCCCHHHHHHH
38.9922595525
494AcetylationYMGKQESKDSFKQLA
HCCCCCCHHHHHHHH
57.557431099
496PhosphorylationGKQESKDSFKQLAKL
CCCCCHHHHHHHHHH
37.7722595525
500PhosphorylationSKDSFKQLAKLVTSG
CHHHHHHHHHHHHHC
4.7124719451
505PhosphorylationKQLAKLVTSGAESGN
HHHHHHHHHCCCCCC
31.7023927012
506PhosphorylationQLAKLVTSGAESGNL
HHHHHHHHCCCCCCC
28.6423927012
510PhosphorylationLVTSGAESGNLNTSP
HHHHCCCCCCCCCCC
32.2323927012
515PhosphorylationAESGNLNTSPSSNQT
CCCCCCCCCCCCCCC
45.2230266825
516PhosphorylationESGNLNTSPSSNQTR
CCCCCCCCCCCCCCC
23.0119664994
518PhosphorylationGNLNTSPSSNQTRNS
CCCCCCCCCCCCCCC
41.5130266825
519PhosphorylationNLNTSPSSNQTRNSE
CCCCCCCCCCCCCCH
36.0229255136
522PhosphorylationTSPSSNQTRNSEKFE
CCCCCCCCCCCHHCC
35.7525159151
523PhosphorylationSPSSNQTRNSEKFEK
CCCCCCCCCCHHCCC
34.6124719451
525PhosphorylationSSNQTRNSEKFEKPE
CCCCCCCCHHCCCCC
38.5828387310
548PhosphorylationCEPPINGSSTPNPKI
ECCCCCCCCCCCCHH
26.9325850435
549PhosphorylationEPPINGSSTPNPKIA
CCCCCCCCCCCCHHH
49.6430576142
550PhosphorylationPPINGSSTPNPKIAS
CCCCCCCCCCCHHHH
28.8725159151
555PhosphorylationSSTPNPKIASSVTAG
CCCCCCHHHHHHHHH
4.7927251275
557PhosphorylationTPNPKIASSVTAGVA
CCCCHHHHHHHHHHH
28.9020860994
558PhosphorylationPNPKIASSVTAGVAS
CCCHHHHHHHHHHHH
17.9227174698
560PhosphorylationPKIASSVTAGVASSL
CHHHHHHHHHHHHHH
21.4627174698
565PhosphorylationSVTAGVASSLSEKIA
HHHHHHHHHHHHHHH
29.4325159151
566PhosphorylationVTAGVASSLSEKIAD
HHHHHHHHHHHHHHH
26.6127174698
568PhosphorylationAGVASSLSEKIADSI
HHHHHHHHHHHHHHC
38.5025159151
570UbiquitinationVASSLSEKIADSIGN
HHHHHHHHHHHHCCC
39.5621906983
573PhosphorylationSLSEKIADSIGNNRQ
HHHHHHHHHCCCCCC
44.2427251275
574PhosphorylationLSEKIADSIGNNRQN
HHHHHHHHCCCCCCC
24.3120860994
577UbiquitinationKIADSIGNNRQNAPL
HHHHHCCCCCCCCCC
38.5521906983
586PhosphorylationRQNAPLTSIQIRFIQ
CCCCCCHHHHHHHHH
21.8522595525
636PhosphorylationMHSLLERYSVNEGLV
HHHHHHHHCCCHHHH
13.95-
637PhosphorylationHSLLERYSVNEGLVA
HHHHHHHCCCHHHHH
25.3714702039

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources
377SPhosphorylationKinaseNEK9Q8TD19
PSP
382TPhosphorylationKinasePLK1P53350
Uniprot
397SPhosphorylationKinasePLK1P53350
Uniprot
405SPhosphorylationKinaseAURKAO14965
GPS
411SPhosphorylationKinaseCDK1P06493
PSP
426SPhosphorylationKinasePLK1P53350
Uniprot
460SPhosphorylationKinaseCDK1P06493
PSP
550TPhosphorylationKinaseCDK1P06493
Uniprot
637SPhosphorylationKinasePLK1P53350
Uniprot

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference
382TPhosphorylation

19509060
397SPhosphorylation

19509060
426SPhosphorylation

19509060
550TPhosphorylation

19509060
637SPhosphorylation

19509060

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of NEDD1_HUMAN !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
HAUS6_HUMANHAUS6physical
19369198
ACTB_HUMANACTBphysical
23443559
CPNS1_HUMANCAPNS1physical
23443559
CSKP_HUMANCASKphysical
23443559
TCPB_HUMANCCT2physical
23443559
TCPG_HUMANCCT3physical
23443559
TCPD_HUMANCCT4physical
23443559
TCPE_HUMANCCT5physical
23443559
TCPZ_HUMANCCT6Aphysical
23443559
TCPH_HUMANCCT7physical
23443559
TCPQ_HUMANCCT8physical
23443559
CHCH1_HUMANCHCHD1physical
23443559
CILP1_HUMANCILPphysical
23443559
CRTC2_HUMANCRTC2physical
23443559
CRTC3_HUMANCRTC3physical
23443559
TBB5_HUMANTUBBphysical
23443559
DCST1_HUMANDCST1physical
23443559
RT18B_HUMANMRPS18Bphysical
23443559
F117B_HUMANFAM117Bphysical
23443559
MZT2B_HUMANMZT2Bphysical
23443559
ROA1_HUMANHNRNPA1physical
23443559
ROA2_HUMANHNRNPA2B1physical
23443559
HNRPF_HUMANHNRNPFphysical
23443559
HNRPU_HUMANHNRNPUphysical
23443559
HS71L_HUMANHSPA1Lphysical
23443559
GRP75_HUMANHSPA9physical
23443559
IRS4_HUMANIRS4physical
23443559
LY65B_HUMANLY6G5Bphysical
23443559
LYSC_HUMANLYZphysical
23443559
RM46_HUMANMRPL46physical
23443559
RT26_HUMANMRPS26physical
23443559
RL13_HUMANRPL13physical
23443559
PFD2_HUMANPFDN2physical
23443559
RAVR1_HUMANRAVER1physical
23443559
RL3_HUMANRPL3physical
23443559
RL38_HUMANRPL38physical
23443559
RS19_HUMANRPS19physical
23443559
RS2_HUMANRPS2physical
23443559
RS3_HUMANRPS3physical
23443559
RS3A_HUMANRPS3Aphysical
23443559
RS4X_HUMANRPS4Xphysical
23443559
RS9_HUMANRPS9physical
23443559
SCO2_HUMANSCO2physical
23443559
TCAL4_HUMANTCEAL4physical
23443559
TCPA_HUMANTCP1physical
23443559
TFAM_HUMANTFAMphysical
23443559
THOC4_HUMANALYREFphysical
23443559
TMPSD_HUMANTMPRSS13physical
23443559
TBA1C_HUMANTUBA1Cphysical
23443559
TBG1_HUMANTUBG1physical
23443559
GCP3_HUMANTUBGCP3physical
23443559
GCP4_HUMANTUBGCP4physical
23443559
GCP6_HUMANTUBGCP6physical
23443559
ZWINT_HUMANZWINTphysical
23443559
ARL1_HUMANARL1physical
26496610
TCPZ_HUMANCCT6Aphysical
26496610
CRY1_HUMANCRY1physical
26496610
ECHM_HUMANECHS1physical
26496610
HELLS_HUMANHELLSphysical
26496610
LG3BP_HUMANLGALS3BPphysical
26496610
M3K4_HUMANMAP3K4physical
26496610
PCM1_HUMANPCM1physical
26496610
PLCB3_HUMANPLCB3physical
26496610
PPM1A_HUMANPPM1Aphysical
26496610
RL27_HUMANRPL27physical
26496610
TCPA_HUMANTCP1physical
26496610
TCPG_HUMANCCT3physical
26496610
TBG1_HUMANTUBG1physical
26496610
YBOX3_HUMANYBX3physical
26496610
TRADD_HUMANTRADDphysical
26496610
ATPK_HUMANATP5J2physical
26496610
TOM20_HUMANTOMM20physical
26496610
GCP3_HUMANTUBGCP3physical
26496610
TCPH_HUMANCCT7physical
26496610
TCPD_HUMANCCT4physical
26496610
TCPB_HUMANCCT2physical
26496610
RPC6_HUMANPOLR3Fphysical
26496610
SYFM_HUMANFARS2physical
26496610
TCPQ_HUMANCCT8physical
26496610
GCP2_HUMANTUBGCP2physical
26496610
AFG32_HUMANAFG3L2physical
26496610
TCPE_HUMANCCT5physical
26496610
CP131_HUMANCEP131physical
26496610
WDFY3_HUMANWDFY3physical
26496610
ZN292_HUMANZNF292physical
26496610
FBX28_HUMANFBXO28physical
26496610
MTCL1_HUMANMTCL1physical
26496610
GCP4_HUMANTUBGCP4physical
26496610
NDK7_HUMANNME7physical
26496610
TXD11_HUMANTXNDC11physical
26496610
PPHLN_HUMANPPHLN1physical
26496610
NUP54_HUMANNUP54physical
26496610
URFB1_HUMANUHRF1BP1physical
26496610
BOREA_HUMANCDCA8physical
26496610
CEP72_HUMANCEP72physical
26496610
HERP2_HUMANHERPUD2physical
26496610
DERL1_HUMANDERL1physical
26496610
CEP97_HUMANCEP97physical
26496610
CJ088_HUMANC10orf88physical
26496610
MAGT1_HUMANMAGT1physical
26496610
ZN644_HUMANZNF644physical
26496610
ING5_HUMANING5physical
26496610
CCD77_HUMANCCDC77physical
26496610
GCP6_HUMANTUBGCP6physical
26496610
GCP5_HUMANTUBGCP5physical
26496610
NRBP2_HUMANNRBP2physical
26496610
MZT1_HUMANMZT1physical
26496610
MZT2A_HUMANMZT2Aphysical
26496610
CNDH2_HUMANNCAPH2physical
27173435

Drug and Disease Associations
Kegg Disease
There are no disease associations of PTM sites.
OMIM Disease
There are no disease associations of PTM sites.
Kegg Drug
There are no disease associations of PTM sites.
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of NEDD1_HUMAN

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"Quantitative phosphoproteomic analysis of T cell receptor signalingreveals system-wide modulation of protein-protein interactions.";
Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K.,Rodionov V., Han D.K.;
Sci. Signal. 2:RA46-RA46(2009).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-516, AND MASSSPECTROMETRY.
"Sequential phosphorylation of Nedd1 by Cdk1 and Plk1 is required fortargeting of the gammaTuRC to the centrosome.";
Zhang X., Chen Q., Feng J., Hou J., Yang F., Liu J., Jiang Q.,Zhang C.;
J. Cell Sci. 122:2240-2251(2009).
Cited for: FUNCTION, PHOSPHORYLATION AT THR-550 BY CDK1, AND PHOSPHORYLATION ATTHR-382; SER-397; SER-426 AND SER-637 BY PLK1.
"Lys-N and trypsin cover complementary parts of the phosphoproteome ina refined SCX-based approach.";
Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J.,Mohammed S.;
Anal. Chem. 81:4493-4501(2009).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-516, AND MASSSPECTROMETRY.
"A quantitative atlas of mitotic phosphorylation.";
Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E.,Elledge S.J., Gygi S.P.;
Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-516, AND MASSSPECTROMETRY.
"Kinase-selective enrichment enables quantitative phosphoproteomics ofthe kinome across the cell cycle.";
Daub H., Olsen J.V., Bairlein M., Gnad F., Oppermann F.S., Korner R.,Greff Z., Keri G., Stemmann O., Mann M.;
Mol. Cell 31:438-448(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-397; SER-411 ANDSER-516, AND MASS SPECTROMETRY.
"Evaluation of the low-specificity protease elastase for large-scalephosphoproteome analysis.";
Wang B., Malik R., Nigg E.A., Korner R.;
Anal. Chem. 80:9526-9533(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-516 AND SER-574, ANDMASS SPECTROMETRY.

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