TCPD_HUMAN - dbPTM
TCPD_HUMAN - PTM Information in dbPTM
Basic Information of Protein
UniProt ID TCPD_HUMAN
UniProt AC P50991
Protein Name T-complex protein 1 subunit delta
Gene Name CCT4
Organism Homo sapiens (Human).
Sequence Length 539
Subcellular Localization Cytoplasm . Melanosome . Cytoplasm, cytoskeleton, microtubule organizing center, centrosome . Cytoplasm, cytoskeleton, cilium basal body . Identified by mass spectrometry in melanosome fractions from stage I to stage IV.
Protein Description Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. As part of the BBS/CCT complex may play a role in the assembly of BBSome, a complex involved in ciliogenesis regulating transports vesicles to the cilia. Known to play a role, in vitro, in the folding of actin and tubulin..
Protein Sequence MPENVAPRSGATAGAAGGRGKGAYQDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVSNSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVIKDIEREDIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVNLNGSGKLLKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTAGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNTR
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
8MethylationMPENVAPRSGATAGA
CCCCCCCCCCCCCCC
37.68-
9PhosphorylationPENVAPRSGATAGAA
CCCCCCCCCCCCCCC
31.5525159151
19MethylationTAGAAGGRGKGAYQD
CCCCCCCCCCCCCCC
42.6124129315
21AcetylationGAAGGRGKGAYQDRD
CCCCCCCCCCCCCCC
38.72-
21MethylationGAAGGRGKGAYQDRD
CCCCCCCCCCCCCCC
38.72-
24PhosphorylationGGRGKGAYQDRDKPA
CCCCCCCCCCCCCCC
21.4425367160
27MethylationGKGAYQDRDKPAQIR
CCCCCCCCCCCCCEE
38.02-
29AcetylationGAYQDRDKPAQIRFS
CCCCCCCCCCCEEEC
43.0525953088
29UbiquitinationGAYQDRDKPAQIRFS
CCCCCCCCCCCEEEC
43.0533845483
36PhosphorylationKPAQIRFSNISAAKA
CCCCEEECCHHHHHH
24.3330266825
40UbiquitinationIRFSNISAAKAVADA
EEECCHHHHHHHHHH
14.8021890473
42UbiquitinationFSNISAAKAVADAIR
ECCHHHHHHHHHHHH
43.0123000965
49MethylationKAVADAIRTSLGPKG
HHHHHHHHHCCCCCC
21.71-
54UbiquitinationAIRTSLGPKGMDKMI
HHHHCCCCCCHHHCC
35.0121890473
552-HydroxyisobutyrylationIRTSLGPKGMDKMIQ
HHHCCCCCCHHHCCC
66.13-
55AcetylationIRTSLGPKGMDKMIQ
HHHCCCCCCHHHCCC
66.1323749302
55SuccinylationIRTSLGPKGMDKMIQ
HHHCCCCCCHHHCCC
66.1323954790
55UbiquitinationIRTSLGPKGMDKMIQ
HHHCCCCCCHHHCCC
66.1329967540
592-HydroxyisobutyrylationLGPKGMDKMIQDGKG
CCCCCHHHCCCCCCC
29.07-
59UbiquitinationLGPKGMDKMIQDGKG
CCCCCHHHCCCCCCC
29.0723000965
60SulfoxidationGPKGMDKMIQDGKGD
CCCCHHHCCCCCCCC
2.6430846556
652-HydroxyisobutyrylationDKMIQDGKGDVTITN
HHCCCCCCCCEEEEC
61.29-
65AcetylationDKMIQDGKGDVTITN
HHCCCCCCCCEEEEC
61.2926051181
65UbiquitinationDKMIQDGKGDVTITN
HHCCCCCCCCEEEEC
61.2923000965
65 (in isoform 2)Phosphorylation-61.2930175587
71PhosphorylationGKGDVTITNDGATIL
CCCCEEEECCHHHHH
20.2125690035
76PhosphorylationTITNDGATILKQMQV
EEECCHHHHHHHHHH
32.1625690035
79AcetylationNDGATILKQMQVLHP
CCHHHHHHHHHHHCH
39.6125953088
79UbiquitinationNDGATILKQMQVLHP
CCHHHHHHHHHHHCH
39.6123000965
81SulfoxidationGATILKQMQVLHPAA
HHHHHHHHHHHCHHH
2.5830846556
92UbiquitinationHPAARMLVELSKAQD
CHHHHHHHHHHHHCC
5.2023000965
95PhosphorylationARMLVELSKAQDIEA
HHHHHHHHHHCCCCC
16.67-
96UbiquitinationRMLVELSKAQDIEAG
HHHHHHHHHCCCCCC
63.7923000965
101UbiquitinationLSKAQDIEAGDGTTS
HHHHCCCCCCCCCEE
55.6921890473
109AcetylationAGDGTTSVVIIAGSL
CCCCCEEEEEEEHHH
3.1719608861
109UbiquitinationAGDGTTSVVIIAGSL
CCCCCEEEEEEEHHH
3.1716196087
113UbiquitinationTTSVVIIAGSLLDSC
CEEEEEEEHHHHHHH
7.1522505724
114UbiquitinationTSVVIIAGSLLDSCT
EEEEEEEHHHHHHHH
14.3921890473
120GlutathionylationAGSLLDSCTKLLQKG
EHHHHHHHHHHHHCC
3.7722555962
122UbiquitinationSLLDSCTKLLQKGIH
HHHHHHHHHHHCCCC
52.0723000965
1262-HydroxyisobutyrylationSCTKLLQKGIHPTII
HHHHHHHCCCCHHHH
60.86-
126AcetylationSCTKLLQKGIHPTII
HHHHHHHCCCCHHHH
60.8625953088
126UbiquitinationSCTKLLQKGIHPTII
HHHHHHHCCCCHHHH
60.8623000965
1392-HydroxyisobutyrylationIISESFQKALEKGIE
HHCHHHHHHHHHCCH
53.59-
139AcetylationIISESFQKALEKGIE
HHCHHHHHHHHHCCH
53.5923749302
139MethylationIISESFQKALEKGIE
HHCHHHHHHHHHCCH
53.5919608861
139UbiquitinationIISESFQKALEKGIE
HHCHHHHHHHHHCCH
53.5916196087
143UbiquitinationSFQKALEKGIEILTD
HHHHHHHHCCHHHHC
67.0722505724
151SulfoxidationGIEILTDMSRPVELS
CCHHHHCCCCCCCCC
2.8530846556
158PhosphorylationMSRPVELSDRETLLN
CCCCCCCCCHHHHHH
22.5525627689
160MethylationRPVELSDRETLLNSA
CCCCCCCHHHHHHHH
35.11-
170PhosphorylationLLNSATTSLNSKVVS
HHHHHCHHHHHHHHH
22.6219664995
177PhosphorylationSLNSKVVSQYSSLLS
HHHHHHHHHHHHHHC
26.7923186163
179PhosphorylationNSKVVSQYSSLLSPM
HHHHHHHHHHHHCCC
7.8523186163
179UbiquitinationNSKVVSQYSSLLSPM
HHHHHHHHHHHHCCC
7.8527667366
180PhosphorylationSKVVSQYSSLLSPMS
HHHHHHHHHHHCCCC
13.5820068231
181PhosphorylationKVVSQYSSLLSPMSV
HHHHHHHHHHCCCCH
28.5320068231
183UbiquitinationVSQYSSLLSPMSVNA
HHHHHHHHCCCCHHH
6.1229967540
184PhosphorylationSQYSSLLSPMSVNAV
HHHHHHHCCCCHHHH
24.6920068231
187PhosphorylationSSLLSPMSVNAVMKV
HHHHCCCCHHHHHHH
18.6620068231
199PhosphorylationMKVIDPATATSVDLR
HHHCCHHHCCCCCHH
35.5421406692
201PhosphorylationVIDPATATSVDLRDI
HCCHHHCCCCCHHHH
25.5729255136
202NeddylationIDPATATSVDLRDIK
CCHHHCCCCCHHHHH
15.9232015554
202PhosphorylationIDPATATSVDLRDIK
CCHHHCCCCCHHHHH
15.9229255136
202UbiquitinationIDPATATSVDLRDIK
CCHHHCCCCCHHHHH
15.9221963094
206MethylationTATSVDLRDIKIVKK
HCCCCCHHHHHHHHH
38.86-
209SuccinylationSVDLRDIKIVKKLGG
CCCHHHHHHHHHCCC
45.8223954790
209SumoylationSVDLRDIKIVKKLGG
CCCHHHHHHHHHCCC
45.82-
209UbiquitinationSVDLRDIKIVKKLGG
CCCHHHHHHHHHCCC
45.8227667366
213AcetylationRDIKIVKKLGGTIDD
HHHHHHHHCCCCCCC
41.2825953088
213UbiquitinationRDIKIVKKLGGTIDD
HHHHHHHHCCCCCCC
41.2829967540
217O-linked_GlycosylationIVKKLGGTIDDCELV
HHHHCCCCCCCCEEE
21.3123301498
217PhosphorylationIVKKLGGTIDDCELV
HHHHCCCCCCCCEEE
21.3130624053
221GlutathionylationLGGTIDDCELVEGLV
CCCCCCCCEEEEEEE
3.7522555962
221S-palmitoylationLGGTIDDCELVEGLV
CCCCCCCCEEEEEEE
3.7526865113
232AcetylationEGLVLTQKVSNSGIT
EEEEEEEECCCCCCC
42.2525953088
232NeddylationEGLVLTQKVSNSGIT
EEEEEEEECCCCCCC
42.2532015554
232UbiquitinationEGLVLTQKVSNSGIT
EEEEEEEECCCCCCC
42.2521963094
234PhosphorylationLVLTQKVSNSGITRV
EEEEEECCCCCCCEE
32.1125159151
236PhosphorylationLTQKVSNSGITRVEK
EEEECCCCCCCEEEE
24.8625159151
239PhosphorylationKVSNSGITRVEKAKI
ECCCCCCCEEEEEEE
31.9929514088
243UbiquitinationSGITRVEKAKIGLIQ
CCCCEEEEEEECEEH
52.7229967540
245UbiquitinationITRVEKAKIGLIQFC
CCEEEEEEECEEHHH
48.66-
252GlutathionylationKIGLIQFCLSAPKTD
EECEEHHHHCCCCCC
1.3622555962
252S-palmitoylationKIGLIQFCLSAPKTD
EECEEHHHHCCCCCC
1.3629575903
254PhosphorylationGLIQFCLSAPKTDMD
CEEHHHHCCCCCCCC
43.6421712546
258AcetylationFCLSAPKTDMDNQIV
HHHCCCCCCCCCCEE
35.1819608861
258PhosphorylationFCLSAPKTDMDNQIV
HHHCCCCCCCCCCEE
35.1821945579
258UbiquitinationFCLSAPKTDMDNQIV
HHHCCCCCCCCCCEE
35.1823000965
260SulfoxidationLSAPKTDMDNQIVVS
HCCCCCCCCCCEEEC
6.7130846556
261UbiquitinationSAPKTDMDNQIVVSD
CCCCCCCCCCEEECC
46.8523000965
262UbiquitinationAPKTDMDNQIVVSDY
CCCCCCCCCEEECCH
27.1723000965
263UbiquitinationPKTDMDNQIVVSDYA
CCCCCCCCEEECCHH
26.1121890473
267PhosphorylationMDNQIVVSDYAQMDR
CCCCEEECCHHHHHH
17.6321945579
269NitrationNQIVVSDYAQMDRVL
CCEEECCHHHHHHHH
7.39-
269PhosphorylationNQIVVSDYAQMDRVL
CCEEECCHHHHHHHH
7.3923663014
272AcetylationVVSDYAQMDRVLREE
EECCHHHHHHHHHHH
2.4319608861
272SulfoxidationVVSDYAQMDRVLREE
EECCHHHHHHHHHHH
2.4330846556
272UbiquitinationVVSDYAQMDRVLREE
EECCHHHHHHHHHHH
2.4321963094
274MethylationSDYAQMDRVLREERA
CCHHHHHHHHHHHHH
24.83-
282NitrationVLREERAYILNLVKQ
HHHHHHHHHHHHHHH
16.50-
282PhosphorylationVLREERAYILNLVKQ
HHHHHHHHHHHHHHH
16.5028442448
288AcetylationAYILNLVKQIKKTGC
HHHHHHHHHHHHHCC
49.8519608861
288MalonylationAYILNLVKQIKKTGC
HHHHHHHHHHHHHCC
49.8526320211
288UbiquitinationAYILNLVKQIKKTGC
HHHHHHHHHHHHHCC
49.8523000965
289AcetylationYILNLVKQIKKTGCN
HHHHHHHHHHHHCCC
45.3019608861
289UbiquitinationYILNLVKQIKKTGCN
HHHHHHHHHHHHCCC
45.3033845483
291UbiquitinationLNLVKQIKKTGCNVL
HHHHHHHHHHCCCEE
41.6123000965
292MalonylationNLVKQIKKTGCNVLL
HHHHHHHHHCCCEEE
52.3526320211
292UbiquitinationNLVKQIKKTGCNVLL
HHHHHHHHHCCCEEE
52.3523000965
294UbiquitinationVKQIKKTGCNVLLIQ
HHHHHHHCCCEEEEE
15.1921890473
295S-nitrosocysteineKQIKKTGCNVLLIQK
HHHHHHCCCEEEEEH
3.73-
295S-nitrosylationKQIKKTGCNVLLIQK
HHHHHHCCCEEEEEH
3.7322178444
295S-palmitoylationKQIKKTGCNVLLIQK
HHHHHHCCCEEEEEH
3.7329575903
296AcetylationQIKKTGCNVLLIQKS
HHHHHCCCEEEEEHH
28.9019608861
3022-HydroxyisobutyrylationCNVLLIQKSILRDAL
CCEEEEEHHHHHHHH
32.25-
302AcetylationCNVLLIQKSILRDAL
CCEEEEEHHHHHHHH
32.2519608861
302UbiquitinationCNVLLIQKSILRDAL
CCEEEEEHHHHHHHH
32.2521963094
303PhosphorylationNVLLIQKSILRDALS
CEEEEEHHHHHHHHH
15.5224719451
3192-HydroxyisobutyrylationLALHFLNKMKIMVIK
HHHHHHHHCCEEEEE
43.66-
319AcetylationLALHFLNKMKIMVIK
HHHHHHHHCCEEEEE
43.6619608861
319UbiquitinationLALHFLNKMKIMVIK
HHHHHHHHCCEEEEE
43.6621906983
3212-HydroxyisobutyrylationLHFLNKMKIMVIKDI
HHHHHHCCEEEEECC
29.29-
321AcetylationLHFLNKMKIMVIKDI
HHHHHHCCEEEEECC
29.2923749302
321MalonylationLHFLNKMKIMVIKDI
HHHHHHCCEEEEECC
29.2926320211
321UbiquitinationLHFLNKMKIMVIKDI
HHHHHHCCEEEEECC
29.2923503661
326AcetylationKMKIMVIKDIEREDI
HCCEEEEECCCHHHH
41.0419608861
337GlutathionylationREDIEFICKTIGTKP
HHHHHHHHHHHCCCC
3.7422555962
342UbiquitinationFICKTIGTKPVAHID
HHHHHHCCCCCCCHH
28.4622817900
343UbiquitinationICKTIGTKPVAHIDQ
HHHHHCCCCCCCHHH
32.08-
345UbiquitinationKTIGTKPVAHIDQFT
HHHCCCCCCCHHHHH
6.8827667366
354UbiquitinationHIDQFTADMLGSAEL
CHHHHHHHHHCCHHH
29.7621963094
365UbiquitinationSAELAEEVNLNGSGK
CHHHHHHHCCCCCCC
8.1121963094
372UbiquitinationVNLNGSGKLLKITGC
HCCCCCCCEEEEEEE
52.9522817900
3752-HydroxyisobutyrylationNGSGKLLKITGCASP
CCCCCEEEEEEECCC
48.97-
375AcetylationNGSGKLLKITGCASP
CCCCCEEEEEEECCC
48.9723236377
375MalonylationNGSGKLLKITGCASP
CCCCCEEEEEEECCC
48.9726320211
375UbiquitinationNGSGKLLKITGCASP
CCCCCEEEEEEECCC
48.9727667366
377PhosphorylationSGKLLKITGCASPGK
CCCEEEEEEECCCCC
25.3129396449
379S-nitrosocysteineKLLKITGCASPGKTV
CEEEEEEECCCCCEE
2.25-
379S-nitrosylationKLLKITGCASPGKTV
CEEEEEEECCCCCEE
2.2522178444
381PhosphorylationLKITGCASPGKTVTI
EEEEEECCCCCEEEE
37.9625159151
384AcetylationTGCASPGKTVTIVVR
EEECCCCCEEEEEEC
43.1126051181
384UbiquitinationTGCASPGKTVTIVVR
EEECCCCCEEEEEEC
43.1121963094
385PhosphorylationGCASPGKTVTIVVRG
EECCCCCEEEEEECC
28.8828450419
387PhosphorylationASPGKTVTIVVRGSN
CCCCCEEEEEECCCC
17.1823312004
393PhosphorylationVTIVVRGSNKLVIEE
EEEEECCCCCEEECH
21.8920860994
3952-HydroxyisobutyrylationIVVRGSNKLVIEEAE
EEECCCCCEEECHHH
45.92-
395AcetylationIVVRGSNKLVIEEAE
EEECCCCCEEECHHH
45.9223954790
395MalonylationIVVRGSNKLVIEEAE
EEECCCCCEEECHHH
45.9226320211
395UbiquitinationIVVRGSNKLVIEEAE
EEECCCCCEEECHHH
45.9221906983
410S-nitrosocysteineRSIHDALCVIRCLVK
HHHHHHHHHHHHHHH
2.28-
410GlutathionylationRSIHDALCVIRCLVK
HHHHHHHHHHHHHHH
2.2822555962
410S-nitrosylationRSIHDALCVIRCLVK
HHHHHHHHHHHHHHH
2.2819483679
442PhosphorylationRLTEYSRTLSGMESY
HHHHHHHHHCCHHHH
21.2326074081
444PhosphorylationTEYSRTLSGMESYCV
HHHHHHHCCHHHHHH
35.1714702039
446SulfoxidationYSRTLSGMESYCVRA
HHHHHCCHHHHHHHH
2.5130846556
448PhosphorylationRTLSGMESYCVRAFA
HHHCCHHHHHHHHHH
18.2328442448
449PhosphorylationTLSGMESYCVRAFAD
HHCCHHHHHHHHHHH
5.0117360941
450GlutathionylationLSGMESYCVRAFADA
HCCHHHHHHHHHHHH
2.0222555962
458SulfoxidationVRAFADAMEVIPSTL
HHHHHHHHHHCHHHH
4.3230846556
459AcetylationRAFADAMEVIPSTLA
HHHHHHHHHCHHHHH
38.7319608861
459UbiquitinationRAFADAMEVIPSTLA
HHHHHHHHHCHHHHH
38.7327667366
463PhosphorylationDAMEVIPSTLAENAG
HHHHHCHHHHHHHCC
25.5721406692
464PhosphorylationAMEVIPSTLAENAGL
HHHHCHHHHHHHCCC
25.3221406692
475PhosphorylationNAGLNPISTVTELRN
HCCCCCCCHHHHHHH
20.3421406692
476PhosphorylationAGLNPISTVTELRNR
CCCCCCCHHHHHHHH
31.9721406692
478PhosphorylationLNPISTVTELRNRHA
CCCCCHHHHHHHHHC
29.4121406692
4892-HydroxyisobutyrylationNRHAQGEKTAGINVR
HHHCCCCCCCCEECC
50.96-
489AcetylationNRHAQGEKTAGINVR
HHHCCCCCCCCEECC
50.9619608861
489UbiquitinationNRHAQGEKTAGINVR
HHHCCCCCCCCEECC
50.9627667366
501UbiquitinationNVRKGGISNILEELV
ECCCCCHHHHHHHHC
22.5423000965
506UbiquitinationGISNILEELVVQPLL
CHHHHHHHHCHHHHH
43.3421890473
528PhosphorylationLATETVRSILKIDDV
HHHHHHHHHHCHHHH
28.1224719451
5312-HydroxyisobutyrylationETVRSILKIDDVVNT
HHHHHHHCHHHHCCC
42.28-
531AcetylationETVRSILKIDDVVNT
HHHHHHHCHHHHCCC
42.2825953088
531SuccinylationETVRSILKIDDVVNT
HHHHHHHCHHHHCCC
42.2823954790
531UbiquitinationETVRSILKIDDVVNT
HHHHHHHCHHHHCCC
42.2823000965
538PhosphorylationKIDDVVNTR------
CHHHHCCCC------
26.5821815630

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources
-KUbiquitinationE3 ubiquitin ligaseCOP1Q8NHY2
PMID:24298020

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of TCPD_HUMAN !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of TCPD_HUMAN !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
TCPZ_HUMANCCT6Aphysical
22939629
TCPG_HUMANCCT3physical
22939629
TCPH_HUMANCCT7physical
22939629
TCPE_HUMANCCT5physical
22939629
TCPQ_HUMANCCT8physical
22939629
TCPW_HUMANCCT6Bphysical
22939629
XPO1_HUMANXPO1physical
22939629
TXNL1_HUMANTXNL1physical
22939629
TCPG_HUMANCCT3physical
22863883
TCPA_HUMANTCP1physical
22863883
SYVC_HUMANVARSphysical
22863883
VRK2_HUMANVRK2physical
24298020
CALX_HUMANCANXphysical
26344197
TCPB_HUMANCCT2physical
26344197
TCPH_HUMANCCT7physical
26344197
TCPQ_HUMANCCT8physical
26344197
DNJA4_HUMANDNAJA4physical
26344197
CH10_HUMANHSPE1physical
26344197
ECM29_HUMANKIAA0368physical
26344197
PDCL3_HUMANPDCL3physical
26344197
PRS7_HUMANPSMC2physical
26344197
TCPA_HUMANTCP1physical
26344197

Drug and Disease Associations
Kegg Disease
There are no disease associations of PTM sites.
OMIM Disease
There are no disease associations of PTM sites.
Kegg Drug
There are no disease associations of PTM sites.
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of TCPD_HUMAN

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Related Literatures of Post-Translational Modification
Acetylation
ReferencePubMed
"Lysine acetylation targets protein complexes and co-regulates majorcellular functions.";
Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T.,Olsen J.V., Mann M.;
Science 325:834-840(2009).
Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-139; LYS-288; LYS-302;LYS-319; LYS-326 AND LYS-489, AND MASS SPECTROMETRY.

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