MEC3_YEAST - dbPTM
MEC3_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID MEC3_YEAST
UniProt AC Q02574
Protein Name DNA damage checkpoint control protein MEC3
Gene Name MEC3
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 474
Subcellular Localization Nucleus .
Protein Description Component of the checkpoint clamp complex involved in the surveillance mechanism that allows the DNA repair pathways to act to restore the integrity of the DNA prior to DNA synthesis or separation of the replicated chromosomes. Associates with sites of DNA damage and modulates the MEC1 signaling pathway and the activation of RAD53 in response to DNA damage at phase G1. The complex also physically regulates DNA polymerase zeta-dependent mutagenesis by controlling the access of polymerase zeta to damaged DNA..
Protein Sequence MKLKLIVNGCEAPDDYKLLRTTINTVASLRKTAILRFNSERLTIISTPKSSLNSSNNGTILRGDTGQLWCTIPHDVFRLYTVISARELNTITMECNCDSLLSVFKRYDRVMNQGSSSNMTIKLQSMPEWNTNNGTLSGGTAGGVDTTSKPNPICALGITFEEIVHTSGPNDAIVMNGGVDEHNGLPTTVGTGNLLASNKVIMHSFKVPVKLLFRAQDTRIQEPMINYIQLMMYKLPPISGEFGSAFHGFIRRVERYSNVNHIHLMGVKKKEHGNEGDDVELKIIVNELDWHLEICWNGPLDSVIQRQEGLTDNPSQNQHIDTDGRQEEGSLPIIEADKPMSSLYTNTRDREMEENIRYDEDLLRIEDSSIADTRGNIYTADTSGDTEFNDISVMVEKAEQESSSTHEVIIRCKDWKVCSKLYAAFEEVVLAISHDESCVFHCSLDRGSLEDSEDVEKPRERGQIIYYIARSKGL
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
21PhosphorylationDDYKLLRTTINTVAS
CHHHHHHHHHHHHHH
31.8127017623
28PhosphorylationTTINTVASLRKTAIL
HHHHHHHHHCCCEEE
25.1127017623
50PhosphorylationTIISTPKSSLNSSNN
EEEECCHHHHCCCCC
41.0617563356
315PhosphorylationEGLTDNPSQNQHIDT
CCCCCCCCCCCCCCC
48.2823749301
322PhosphorylationSQNQHIDTDGRQEEG
CCCCCCCCCCCCCCC
39.4930377154
341PhosphorylationIEADKPMSSLYTNTR
EECCCCCCHHCCCCC
26.2230377154
342PhosphorylationEADKPMSSLYTNTRD
ECCCCCCHHCCCCCC
21.1030377154
368PhosphorylationDLLRIEDSSIADTRG
HHHCCCCCCCCCCCC
15.7422369663
369PhosphorylationLLRIEDSSIADTRGN
HHCCCCCCCCCCCCC
33.8322369663
373PhosphorylationEDSSIADTRGNIYTA
CCCCCCCCCCCEEEC
31.3022369663
452PhosphorylationDRGSLEDSEDVEKPR
CCCCCCCCCCCCCHH
26.7317563356

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of MEC3_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of MEC3_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of MEC3_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
RAD17_YEASTRAD17physical
11805837
ATG16_YEASTATG16physical
10688190
DDC1_YEASTDDC1physical
9891048
DDC1_YEASTDDC1physical
9670034
SET1_YEASTSET1physical
9988274
RAD17_YEASTRAD17physical
9891048
DDC1_YEASTDDC1physical
12604797
RAD17_YEASTRAD17physical
12604797
SET1_YEASTSET1physical
15071505
RAD17_YEASTRAD17physical
11356855
REV7_YEASTREV7physical
16169844
DDC1_YEASTDDC1physical
16202664
RAD17_YEASTRAD17physical
16202664
ATM_YEASTTEL1genetic
12963812
DPB11_YEASTDPB11genetic
11917116
TERT_YEASTEST2genetic
11917116
PIF1_YEASTPIF1genetic
11917116
RFC1_YEASTRFC1genetic
11917116
SGS1_YEASTSGS1genetic
11917116
DPOA_YEASTPOL1genetic
8668138
RFA1_YEASTRFA1genetic
8668138
RFA2_YEASTRFA2genetic
8668138
PRI1_YEASTPRI1genetic
8668138
SET1_YEASTSET1genetic
9988274
CALM_YEASTCMD1physical
16554755
MLC1_YEASTMLC1physical
16554755
MYO2_YEASTMYO2physical
16554755
ASF1_YEASTASF1genetic
16809776
RAD51_YEASTRAD51genetic
16809776
FEN1_YEASTRAD27genetic
17314980
DPOD3_YEASTPOL32genetic
17314980
MRC1_YEASTMRC1genetic
17314980
CTF8_YEASTCTF8genetic
17314980
RAD5_YEASTRAD5genetic
17314980
UBR1_YEASTUBR1genetic
17314980
DCC1_YEASTDCC1genetic
17314980
MET18_YEASTMET18genetic
17314980
YKK7_YEASTYKL107Wphysical
11283351
YL125_YEASTYLR125Wphysical
11283351
ATG16_YEASTATG16physical
11283351
SET1_YEASTSET1genetic
15071505
CTF4_YEASTCTF4genetic
18273828
DBP3_YEASTDBP3genetic
18273828
DPOD3_YEASTPOL32genetic
18273828
RAD17_YEASTRAD17physical
18485869
SSB1_YEASTSSB1physical
19536198
MRC1_YEASTMRC1genetic
18931302
FEN1_YEASTRAD27genetic
18931302
RAD5_YEASTRAD5genetic
18931302
H4_YEASTHHF1genetic
15808514
MRC1_YEASTMRC1genetic
20093466
ORM1_YEASTORM1genetic
20093466
RT107_YEASTRTT107genetic
20093466
CTF8_YEASTCTF8genetic
20093466
THIK_YEASTPOT1genetic
20093466
ASF1_YEASTASF1genetic
20093466
DPOD3_YEASTPOL32genetic
20093466
FEN1_YEASTRAD27genetic
20093466
RAD5_YEASTRAD5genetic
20093466
LEUR_YEASTLEU3genetic
20093466
TSA1_YEASTTSA1genetic
20093466
CSM3_YEASTCSM3genetic
20093466
YHM2_YEASTYHM2genetic
20093466
DIA2_YEASTDIA2genetic
20093466
ELG1_YEASTELG1genetic
20093466
FYV12_YEASTFYV12genetic
20093466
CGS5_YEASTCLB5genetic
20093466
DDC1_YEASTDDC1genetic
9311982
RAD52_YEASTRAD52genetic
16809776
RRM3_YEASTRRM3genetic
16809776
DPB11_YEASTDPB11genetic
11973288
DDC1_YEASTDDC1genetic
9891048
RAD17_YEASTRAD17genetic
16137930
DDC1_YEASTDDC1genetic
16137930
CTF18_YEASTCTF18genetic
16487579
CTF8_YEASTCTF8genetic
16487579
DCC1_YEASTDCC1genetic
16487579
CSM3_YEASTCSM3genetic
16487579
DUN1_YEASTDUN1genetic
16487579
MRC1_YEASTMRC1genetic
16487579
DPOD3_YEASTPOL32genetic
16487579
TOF1_YEASTTOF1genetic
16487579
FEN1_YEASTRAD27genetic
16487579
RIR4_YEASTRNR4genetic
16487579
SODC_YEASTSOD1genetic
16487579
ELG1_YEASTELG1genetic
16487579
TSA1_YEASTTSA1genetic
16487579
SGS1_YEASTSGS1genetic
21111748
RED1_YEASTRED1physical
20534433
RFA1_YEASTRFA1genetic
23312805
DDC1_YEASTDDC1physical
25122752
RAD17_YEASTRAD17physical
25122752
STN1_YEASTSTN1genetic
27708008
ERF3_YEASTSUP35genetic
27708008
ACT_YEASTACT1genetic
27708008
ERG26_YEASTERG26genetic
27708008
SMC3_YEASTSMC3genetic
27708008
CBF3C_YEASTCTF13genetic
27708008
TAF9_YEASTTAF9genetic
27708008
CUS1_YEASTCUS1genetic
27708008
NOP2_YEASTNOP2genetic
27708008
PROF_YEASTPFY1genetic
27708008
RPA1_YEASTRPA190genetic
27708008
GPI2_YEASTGPI2genetic
27708008
HRR25_YEASTHRR25genetic
27708008
RFA1_YEASTRFA1genetic
27708008
DPOA2_YEASTPOL12genetic
27708008
ERD2_YEASTERD2genetic
27708008
TFC1_YEASTTFC1genetic
27708008
MCM7_YEASTMCM7genetic
27708008
TRS20_YEASTTRS20genetic
27708008
UBC9_YEASTUBC9genetic
27708008
DPOD_YEASTPOL3genetic
27708008
TCPD_YEASTCCT4genetic
27708008
PSF1_YEASTPSF1genetic
27708008
DBF4_YEASTDBF4genetic
27708008
CDC37_YEASTCDC37genetic
27708008
CDC1_YEASTCDC1genetic
27708008
TCPZ_YEASTCCT6genetic
27708008
RSC3_YEASTRSC3genetic
27708008
TFB1_YEASTTFB1genetic
27708008
RMRP_YEASTSNM1genetic
27708008
SLD5_YEASTSLD5genetic
27708008
COG3_YEASTCOG3genetic
27708008
SLD3_YEASTSLD3genetic
27708008
CDC20_YEASTCDC20genetic
27708008
PRP18_YEASTPRP18genetic
27708008
NUP57_YEASTNUP57genetic
27708008
RRP3_YEASTRRP3genetic
27708008
YHS2_YEASTCIA2genetic
27708008
SLN1_YEASTSLN1genetic
27708008
PSF2_YEASTPSF2genetic
27708008
DPB11_YEASTDPB11genetic
27708008
DPOD2_YEASTPOL31genetic
27708008
CDT1_YEASTTAH11genetic
27708008
RFC2_YEASTRFC2genetic
27708008
PRI2_YEASTPRI2genetic
27708008
PRP19_YEASTPRP19genetic
27708008
STU2_YEASTSTU2genetic
27708008
CFT2_YEASTCFT2genetic
27708008
ORC1_YEASTORC1genetic
27708008
SEC65_YEASTSEC65genetic
27708008
MED7_YEASTMED7genetic
27708008
APC5_YEASTAPC5genetic
27708008
CLP1_YEASTCLP1genetic
27708008
PSA7_YEASTPRE10genetic
27708008
NAB3_YEASTNAB3genetic
27708008
ASA1_YEASTASA1genetic
27708008
PSB5_YEASTPRE2genetic
27708008
ORC4_YEASTORC4genetic
27708008
DCC1_YEASTDCC1genetic
27708008
MRC1_YEASTMRC1genetic
27708008
ELO2_YEASTELO2genetic
27708008
TPS2_YEASTTPS2genetic
27708008
MRM2_YEASTMRM2genetic
27708008
RT107_YEASTRTT107genetic
27708008
CTF8_YEASTCTF8genetic
27708008
THIK_YEASTPOT1genetic
27708008
SIP4_YEASTSIP4genetic
27708008
ASF1_YEASTASF1genetic
27708008
DPOD3_YEASTPOL32genetic
27708008
FEN1_YEASTRAD27genetic
27708008
RAD5_YEASTRAD5genetic
27708008
TSA1_YEASTTSA1genetic
27708008
CSM3_YEASTCSM3genetic
27708008
HST3_YEASTHST3genetic
27708008
DIA2_YEASTDIA2genetic
27708008
ELG1_YEASTELG1genetic
27708008
FYV12_YEASTFYV12genetic
27708008
CGS5_YEASTCLB5genetic
27708008
SGS1_YEASTSGS1genetic
25925573
RAD9_YEASTRAD9genetic
25925573
MCM7_YEASTMCM7genetic
29674565
MRC1_YEASTMRC1genetic
29674565
STN1_YEASTSTN1genetic
29674565
SLD3_YEASTSLD3genetic
29674565
ORC6_YEASTORC6genetic
29674565
DPOD3_YEASTPOL32genetic
29674565
RAD5_YEASTRAD5genetic
29674565
RFA1_YEASTRFA1genetic
29674565
MCM2_YEASTMCM2genetic
29674565
STU1_YEASTSTU1genetic
29674565
KPC1_YEASTPKC1genetic
29674565
SLX5_YEASTSLX5genetic
29674565
CDC7_YEASTCDC7genetic
29674565
DPOD_YEASTPOL3genetic
29674565
DBF4_YEASTDBF4genetic
29674565
TPS2_YEASTTPS2genetic
29674565
CEM1_YEASTCEM1genetic
29674565
GET2_YEASTGET2genetic
29674565
PRP21_YEASTPRP21genetic
29674565
CDC11_YEASTCDC11genetic
29674565
FEN1_YEASTRAD27genetic
29674565
SAC1_YEASTSAC1genetic
29674565
ORC3_YEASTORC3genetic
29674565
FRA1_YEASTFRA1genetic
29674565
ERG27_YEASTERG27genetic
29674565
TSA1_YEASTTSA1genetic
29674565
ORC1_YEASTORC1genetic
29674565
CSM3_YEASTCSM3genetic
29674565
SIN3_YEASTSIN3genetic
29674565
RFC4_YEASTRFC4genetic
29674565
DIA2_YEASTDIA2genetic
29674565
ELG1_YEASTELG1genetic
29674565
CGS5_YEASTCLB5genetic
29674565
ORC4_YEASTORC4genetic
29674565

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of MEC3_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-452, AND MASSSPECTROMETRY.
"Proteome-wide identification of in vivo targets of DNA damagecheckpoint kinases.";
Smolka M.B., Albuquerque C.P., Chen S.H., Zhou H.;
Proc. Natl. Acad. Sci. U.S.A. 104:10364-10369(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-50 AND SER-452, AND MASSSPECTROMETRY.

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