DCA13_YEAST - dbPTM
DCA13_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID DCA13_YEAST
UniProt AC P33750
Protein Name Protein SOF1
Gene Name SOF1
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 489
Subcellular Localization Nucleus, nucleolus .
Protein Description Required for ribosomal RNA processing..
Protein Sequence MKIKTIKRSADDYVPVKSTQESQMPRNLNPELHPFERAREYTKALNATKLERMFAKPFVGQLGYGHRDGVYAIAKNYGSLNKLATGSADGVIKYWNMSTREEFVSFKAHYGLVTGLCVTQPRFHDKKPDLKSQNFMLSCSDDKTVKLWSINVDDYSNKNSSDNDSVTNEEGLIRTFDGESAFQGIDSHRENSTFATGGAKIHLWDVNRLKPVSDLSWGADNITSLKFNQNETDILASTGSDNSIVLYDLRTNSPTQKIVQTMRTNAICWNPMEAFNFVTANEDHNAYYYDMRNLSRSLNVFKDHVSAVMDVDFSPTGDEIVTGSYDKSIRIYKTNHGHSREIYHTKRMQHVFQVKYSMDSKYIISGSDDGNVRLWRSKAWERSNVKTTREKNKLEYDEKLKERFRHMPEIKRISRHRHVPQVIKKAQEIKNIELSSIKRREANERRTRKDMPYISERKKQIVGTVHKYEDSGRDRKRRKEDDKRDTQEK
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure		 ASA (%) Reference Orthologous
Protein Cluster
49AcetylationTKALNATKLERMFAK
HHHHCCHHHHHHHCC		46.0425381059
56AcetylationKLERMFAKPFVGQLG
HHHHHHCCCCCCCCC		27.9424489116
82AcetylationKNYGSLNKLATGSAD
ECCCCCCHHCCCCCC		44.8024489116
160PhosphorylationDDYSNKNSSDNDSVT
HHCCCCCCCCCCCCC		40.4528889911
161PhosphorylationDYSNKNSSDNDSVTN
HCCCCCCCCCCCCCC		50.2327214570
165PhosphorylationKNSSDNDSVTNEEGL
CCCCCCCCCCCCCCC		36.7827214570
257AcetylationRTNSPTQKIVQTMRT
CCCCCHHHHHHHHHH		47.5325381059
324PhosphorylationGDEIVTGSYDKSIRI
CCCEEECCCCCEEEE		22.3127017623
325PhosphorylationDEIVTGSYDKSIRIY
CCEEECCCCCEEEEE		28.8327017623
328PhosphorylationVTGSYDKSIRIYKTN
EECCCCCEEEEEECC		17.7519779198
464PhosphorylationRKKQIVGTVHKYEDS
HHHEEEEEEECCCCC		14.4528889911
467AcetylationQIVGTVHKYEDSGRD
EEEEEEECCCCCCCC		46.1024489116
Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of DCA13_YEAST !!
Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of DCA13_YEAST !!
Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10) 		Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of DCA13_YEAST !!
Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
TCPG_YEASTCCT3physical
11805837
TCPA_YEASTTCP1physical
11805837
TCPB_YEASTCCT2physical
11805837
TCPZ_YEASTCCT6physical
11805837
TCPE_YEASTCCT5physical
11805837
NAT10_YEASTKRE33physical
11805837
RRP5_YEASTRRP5physical
11805837
FBRL_YEASTNOP1physical
8508778
UBP10_YEASTUBP10physical
18467557
UTP14_YEASTUTP14physical
18467557
MED31_YEASTSOH1genetic
19269370
MNN11_YEASTMNN11genetic
19269370
XPO1_YEASTCRM1genetic
27708008
CDC12_YEASTCDC12genetic
27708008
SEN1_YEASTSEN1genetic
27708008
RL4A_YEASTRPL4Agenetic
27708008
RL13A_YEASTRPL13Agenetic
27708008
VPS41_YEASTVPS41genetic
27708008
LSM6_YEASTLSM6genetic
27708008
GBLP_YEASTASC1genetic
27708008
SLI15_YEASTSLI15genetic
27708008
KRR1_YEASTKRR1genetic
27708008
APC11_YEASTAPC11genetic
27708008
FBRL_YEASTNOP1genetic
27708008
PRP9_YEASTPRP9genetic
27708008
NOP14_YEASTNOP14genetic
27708008
CWC2_YEASTCWC2genetic
27708008
FAL1_YEASTFAL1genetic
27708008
DBF4_YEASTDBF4genetic
27708008
RRP1_YEASTRRP1genetic
27708008
ERF3_YEASTSUP35genetic
27708008
CDC1_YEASTCDC1genetic
27708008
SLY1_YEASTSLY1genetic
27708008
TCPA_YEASTTCP1genetic
27708008
FCF1_YEASTFCF1genetic
27708008
GPI19_YEASTGPI19genetic
27708008
UTP6_YEASTUTP6genetic
27708008
GNA1_YEASTGNA1genetic
27708008
ACT_YEASTACT1genetic
27708008
DUO1_YEASTDUO1genetic
27708008
CDC20_YEASTCDC20genetic
27708008
ATC7_YEASTNEO1genetic
27708008
TCPE_YEASTCCT5genetic
27708008
ARP3_YEASTARP3genetic
27708008
RFC2_YEASTRFC2genetic
27708008
CDC11_YEASTCDC11genetic
27708008
RSC4_YEASTRSC4genetic
27708008
TAD3_YEASTTAD3genetic
27708008
IMB1_YEASTKAP95genetic
27708008
POB3_YEASTPOB3genetic
27708008
RRP5_YEASTRRP5genetic
27708008
HAS1_YEASTHAS1genetic
27708008
DPOA_YEASTPOL1genetic
27708008
MVD1_YEASTMVD1genetic
27708008
MED7_YEASTMED7genetic
27708008
XRN2_YEASTRAT1genetic
27708008
GRPE_YEASTMGE1genetic
27708008
SEC63_YEASTSEC63genetic
27708008
MYO2_YEASTMYO2genetic
27708008
MOT1_YEASTMOT1genetic
27708008
IPL1_YEASTIPL1genetic
27708008
TF2B_YEASTSUA7genetic
27708008
BUR1_YEASTSGV1genetic
27708008
YBM6_YEASTYBR016Wgenetic
27708008
SWC5_YEASTSWC5genetic
27708008
SGF29_YEASTSGF29genetic
27708008
THRC_YEASTTHR4genetic
27708008
ATG15_YEASTATG15genetic
27708008
NHP10_YEASTNHP10genetic
27708008
SLX5_YEASTSLX5genetic
27708008
MGMT_YEASTMGT1genetic
27708008
NOP6_YEASTNOP6genetic
27708008
PLP1_YEASTPLP1genetic
27708008
PHM6_YEASTPHM6genetic
27708008
RIM15_YEASTRIM15genetic
27708008
SGF73_YEASTSGF73genetic
27708008
MTL1_YEASTMTL1genetic
27708008
PFD3_YEASTPAC10genetic
27708008
SKN1_YEASTSKN1genetic
27708008
YHC6_YEASTYHL026Cgenetic
27708008
DAL81_YEASTDAL81genetic
27708008
VPS53_YEASTVPS53genetic
27708008
YJY1_YEASTYJR011Cgenetic
27708008
DOHH_YEASTLIA1genetic
27708008
HOC1_YEASTHOC1genetic
27708008
YJ9J_YEASTYJR142Wgenetic
27708008
SAC1_YEASTSAC1genetic
27708008
RL1D1_YEASTUTP30genetic
27708008
SEI1_YEASTFLD1genetic
27708008
CAC2_YEASTCAC2genetic
27708008
YMW4_YEASTYMR074Cgenetic
27708008
CPT1_YEASTCPT1genetic
27708008
EAF7_YEASTEAF7genetic
27708008
PFD4_YEASTGIM3genetic
27708008
RRP6_YEASTRRP6genetic
27708008
ELG1_YEASTELG1genetic
27708008
PDE2_YEASTPDE2genetic
27708008
SGF11_YEASTSGF11genetic
27708008
SUR1_YEASTSUR1genetic
27708008
CUP9_YEASTCUP9genetic
27708008
NCBP2_YEASTCBC2genetic
27708008
NEW1_YEASTNEW1genetic
27708008
YP245_YEASTYPL245Wgenetic
27708008
KAR3_YEASTKAR3genetic
27708008
PDXH_YEASTYPR172Wgenetic
27708008
HDA3_YEASTHDA3genetic
27708008
DVL2_HUMANDVL2physical
27107014
DVL3_HUMANDVL3physical
27107014
Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of DCA13_YEAST

loading...

Related Literatures of Post-Translational Modification

TOP
© 2024 Institute of Bioinformatics and Systems Biology, NYCU | Designed by : BiOmics Laboratory