IKBA_HUMAN - dbPTM
IKBA_HUMAN - PTM Information in dbPTM
Basic Information of Protein
UniProt ID IKBA_HUMAN
UniProt AC P25963
Protein Name NF-kappa-B inhibitor alpha
Gene Name NFKBIA
Organism Homo sapiens (Human).
Sequence Length 317
Subcellular Localization Cytoplasm. Nucleus. Shuttles between the nucleus and the cytoplasm by a nuclear localization signal (NLS) and a CRM1-dependent nuclear export..
Protein Description Inhibits the activity of dimeric NF-kappa-B/REL complexes by trapping REL dimers in the cytoplasm through masking of their nuclear localization signals. On cellular stimulation by immune and proinflammatory responses, becomes phosphorylated promoting ubiquitination and degradation, enabling the dimeric RELA to translocate to the nucleus and activate transcription..
Protein Sequence MFQAAERPQEWAMEGPRDGLKKERLLDDRHDSGLDSMKDEEYEQMVKELQEIRLEPQEVPRGSEPWKQQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEFTEDELPYDDCVFGGQRLTL
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
21UbiquitinationEGPRDGLKKERLLDD
CCCCCCCCHHHHHCC
59.117479976
21SumoylationEGPRDGLKKERLLDD
CCCCCCCCHHHHHCC
59.117479976
21SumoylationEGPRDGLKKERLLDD
CCCCCCCCHHHHHCC
59.11-
22UbiquitinationGPRDGLKKERLLDDR
CCCCCCCHHHHHCCC
53.787479976
22SumoylationGPRDGLKKERLLDDR
CCCCCCCHHHHHCCC
53.78-
22SumoylationGPRDGLKKERLLDDR
CCCCCCCHHHHHCCC
53.78-
32PhosphorylationLLDDRHDSGLDSMKD
HHCCCCCCCHHHHCH
34.8211266466
36PhosphorylationRHDSGLDSMKDEEYE
CCCCCHHHHCHHHHH
32.5422322096
38UbiquitinationDSGLDSMKDEEYEQM
CCCHHHHCHHHHHHH
66.9722817900
42PhosphorylationDSMKDEEYEQMVKEL
HHHCHHHHHHHHHHH
14.9311266466
42DephosphorylationDSMKDEEYEQMVKEL
HHHCHHHHHHHHHHH
14.9311106428
45SulfoxidationKDEEYEQMVKELQEI
CHHHHHHHHHHHHHH
2.8811983684
47UbiquitinationEEYEQMVKELQEIRL
HHHHHHHHHHHHHCC
47.5722817900
67UbiquitinationPRGSEPWKQQLTEDG
CCCCCCHHHHCCCCC
38.5929967540
87UbiquitinationLAIIHEEKALTMEVI
EEEECHHHCCHHHHH
45.79-
90PhosphorylationIHEEKALTMEVIRQV
ECHHHCCHHHHHHHH
19.0220068231
98UbiquitinationMEVIRQVKGDLAFLN
HHHHHHHCCCCEEEE
38.07-
166PhosphorylationSVGVLTQSCTTPHLH
HHHHHCCCCCCCCHH
14.27-
174PhosphorylationCTTPHLHSILKATNY
CCCCCHHHHHHHCCC
35.6624719451
181NitrationSILKATNYNGHTCLH
HHHHHCCCCCCCCEE
20.40-
186GlutathionylationTNYNGHTCLHLASIH
CCCCCCCCEEHHHHH
1.5522833525
210HydroxylationVSLGADVNAQEPCNG
HHCCCCCCCCCCCCC
36.1317003112
238UbiquitinationDLVSLLLKCGADVNR
CHHHHHHHCCCCCCC
30.5021963094
244HydroxylationLKCGADVNRVTYQGY
HHCCCCCCCEEECCC
33.0017003112
283PhosphorylationNLQMLPESEDEESYD
HHCCCCCCCCCCCCC
48.7022817900
288PhosphorylationPESEDEESYDTESEF
CCCCCCCCCCCCCCC
26.6822817900
289PhosphorylationESEDEESYDTESEFT
CCCCCCCCCCCCCCC
30.11-
291PhosphorylationEDEESYDTESEFTEF
CCCCCCCCCCCCCCC
32.9322817900
293PhosphorylationEESYDTESEFTEFTE
CCCCCCCCCCCCCCC
39.8522817900
299PhosphorylationESEFTEFTEDELPYD
CCCCCCCCCCCCCCC
35.978797825
305PhosphorylationFTEDELPYDDCVFGG
CCCCCCCCCCCCCCC
36.7214757045
305NitrationFTEDELPYDDCVFGG
CCCCCCCCCCCCCCC
36.72-

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources
32SPhosphorylationKinaseCK2-FAMILY-GPS
32SPhosphorylationKinaseMAP3K14Q99558
GPS
32SPhosphorylationKinaseRPS6KA3P51812
GPS
32SPhosphorylationKinaseRPS6KA1Q15418
GPS
32SPhosphorylationKinaseIKBKEQ14164
GPS
32SPhosphorylationKinaseMAPK15Q8TD08
GPS
32SPhosphorylationKinaseIKBKBO14920
GPS
32SPhosphorylationKinaseSGK1O00141
PSP
32SPhosphorylationKinaseCHUKO15111
GPS
32SPhosphorylationKinaseCSNK2A1P68400
GPS
32SPhosphorylationKinaseIKK-FAMILY-GPS
32SPhosphorylationKinaseCK2_GROUP-PhosphoELM
32SPhosphorylationKinaseIKK_GROUP-PhosphoELM
32SPhosphorylationKinaseAURKCQ9UQB9
GPS
32SPhosphorylationKinaseAURKAO14965
GPS
36SPhosphorylationKinaseCK2-FAMILY-GPS
36SPhosphorylationKinaseAURKAO14965
GPS
36SPhosphorylationKinaseTBK1Q9UHD2
Uniprot
36SPhosphorylationKinaseIKK-FAMILY-GPS
36SPhosphorylationKinaseCK2_GROUP-PhosphoELM
36SPhosphorylationKinaseMAPK15Q8TD08
GPS
36SPhosphorylationKinaseMAP3K14Q99558
GPS
36SPhosphorylationKinaseIKK_GROUP-PhosphoELM
36SPhosphorylationKinaseIKBKEQ14164
GPS
36SPhosphorylationKinaseIKBKBO14920
GPS
36SPhosphorylationKinaseCHUKO15111
GPS
36SPhosphorylationKinaseCSNK2A1P68400
GPS
42YPhosphorylationKinaseINSRP06213
PSP
42YPhosphorylationKinaseSRC64-PhosphoELM
42YPhosphorylationKinaseTYR-KINASES-Uniprot
42YPhosphorylationKinaseLCKP06239
PSP
42YPhosphorylationKinaseSRCP05480
PSP
283SPhosphorylationKinaseCK2-Uniprot
283SPhosphorylationKinaseCK2_GROUP-PhosphoELM
283SPhosphorylationKinaseCSNK2A1P68400
GPS
283SPhosphorylationKinaseCK2-FAMILY-GPS
288SPhosphorylationKinaseCSNK2A1P68400
GPS
288SPhosphorylationKinaseCK2-FAMILY-GPS
288SPhosphorylationKinaseCK2-Uniprot
289YPhosphorylationKinaseBTKQ06187
PSP
291TPhosphorylationKinaseCK2-FAMILY-GPS
291TPhosphorylationKinaseCSNK2A1P68400
GPS
291TPhosphorylationKinaseCK2_GROUP-PhosphoELM
291TPhosphorylationKinaseCK2-Uniprot
293SPhosphorylationKinaseCK2-Uniprot
293SPhosphorylationKinaseCSNK2A1P68400
GPS
293SPhosphorylationKinaseCK2-FAMILY-GPS
299TPhosphorylationKinaseCK2-Uniprot
299TPhosphorylationKinaseCK2-FAMILY-GPS
299TPhosphorylationKinaseCSNK2A1P68400
GPS
305YPhosphorylationKinaseABL-FAMILY-GPS
305YPhosphorylationKinaseBTKQ06187
PSP
305YPhosphorylationKinaseABL1P00519
PhosphoELM
-KUbiquitinationE3 ubiquitin ligaseFBXW11Q9UKB1
PMID:10748083
-KUbiquitinationE3 ubiquitin ligaseBTRCQ9Y297
PMID:10066435
-KUbiquitinationE3 ubiquitin ligaseSKP2Q13309
PMID:22199232
-KUbiquitinationE3 ubiquitin ligaseCDC34P49427
PMID:22199232
-KUbiquitinationE3 ubiquitin ligaseSAGP10523
PMID:23136067
-KUbiquitinationE3 ubiquitin ligaseTRIM63Q969Q1
PMID:23535871

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference
21Kubiquitylation

7479976
22Kubiquitylation

7479976
32SPhosphorylation

8657102
32Subiquitylation

8657102
36SPhosphorylation

8657102
36Subiquitylation

8657102

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of IKBA_HUMAN !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
P121A_HUMANPOM121physical
16189514
PIR_HUMANPIRphysical
10362352
BARD1_HUMANBARD1physical
10362352
TF65_HUMANRELAphysical
11533489
TF65_HUMANRELAphysical
12419806
FBW1A_HUMANBTRCphysical
9990853
TF65_HUMANRELAphysical
9990853
TF65_HUMANRELAphysical
11313474
NFKB1_HUMANNFKB1physical
11313474
ROA1_HUMANHNRNPA1physical
11313474
DYL1_HUMANDYNLL1physical
9372968
KS6A1_HUMANRPS6KA1physical
9214631
G3BP2_HUMANG3BP2physical
10969074
CAN1_HUMANCAPN1physical
10521480
IKKB_HUMANIKBKBphysical
9751059
IKKA_HUMANCHUKphysical
9751059
M3K14_HUMANMAP3K14physical
9751059
TF65_HUMANRELAphysical
9751059
ELP1_HUMANIKBKAPphysical
9751059
IKKA_HUMANCHUKphysical
10094049
HXB7_HUMANHOXB7physical
10026139
UB2D1_HUMANUBE2D1physical
9409737
AURKA_HUMANAURKAphysical
17060341
RELB_HUMANRELBphysical
19219072
TF65_HUMANRELAphysical
19219072
PSA2_HUMANPSMA2physical
16098527
TF65_HUMANRELAphysical
16105840
NFKB1_HUMANNFKB1physical
20980497
TF65_HUMANRELAphysical
20980497
NCOR1_HUMANNCOR1physical
15536134
NCOR2_HUMANNCOR2physical
15536134
CUL1_HUMANCUL1physical
11483504
TF65_HUMANRELAphysical
11231305
CUL1_HUMANCUL1physical
10713156
SKP1_HUMANSKP1physical
10230406
FBW1B_HUMANFBXW11physical
10230406
FBW1A_HUMANBTRCphysical
10066435
FBW1B_HUMANFBXW11physical
10066435
SKP1_HUMANSKP1physical
10066435
CUL1_HUMANCUL1physical
10066435
ADT1_HUMANSLC25A4physical
11287411
TF65_HUMANRELAphysical
11287411
KS6A1_HUMANRPS6KA1physical
9261139
FBW1A_HUMANBTRCphysical
9859996
FBW1B_HUMANFBXW11physical
12165731
SKP1_HUMANSKP1physical
9990852
TF65_HUMANRELAphysical
8657102
CLUS_HUMANCLUphysical
20068069
MALT1_HUMANMALT1physical
20551178
BCL10_HUMANBCL10physical
20551178
TF65_HUMANRELAphysical
20551178
KC1A_HUMANCSNK1A1physical
20551178
TF65_HUMANRELAphysical
10066434
FBW1A_HUMANBTRCphysical
19933270
IKKB_HUMANIKBKBphysical
20797629
TF65_HUMANRELAphysical
20797629
TF65_HUMANRELAphysical
22022389
FBW1A_HUMANBTRCphysical
20797629
MK14_HUMANMAPK14physical
20797629
IKBB_HUMANNFKBIBphysical
22081069
TF65_HUMANRELAphysical
22081069
NEMO_HUMANIKBKGphysical
22081069
CSN2_HUMANCOPS2physical
17318178
NFKB1_HUMANNFKB1physical
20558726
FBW1A_HUMANBTRCphysical
20558726
FBXW8_HUMANFBXW8physical
20558726
FBW1A_HUMANBTRCphysical
9990852
TERA_HUMANVCPphysical
10930447
SKP1_HUMANSKP1physical
22590978
CUL1_HUMANCUL1physical
22590978
PSA4_HUMANPSMA4physical
9875328
TF65_HUMANRELAphysical
14690596
PIN1_HUMANPIN1physical
14690596
NFKB1_HUMANNFKB1physical
11020244
TF65_HUMANRELAphysical
11020244
CUL1_HUMANCUL1physical
11027288
DNJA3_HUMANDNAJA3physical
15601829
SOCS3_HUMANSOCS3physical
21451109
ATF4_HUMANATF4physical
18255255
ARRB1_HUMANARRB1physical
15173580
ARRB2_HUMANARRB2physical
15173580
PSA1_HUMANPSMA1physical
23393163
TERA_HUMANVCPphysical
23393163
REL_HUMANRELphysical
8887627
TF65_HUMANRELAphysical
8887627
ARRB2_HUMANARRB2physical
15125834
ARRB1_HUMANARRB1physical
15125834
CSK2B_HUMANCSNK2Bphysical
10398585
CSN1_HUMANGPS1physical
23818606
CSN3_HUMANCOPS3physical
23818606
RPB3_HUMANPOLR2Cphysical
21988832
TF65_HUMANRELAphysical
21988832
ST7_HUMANST7physical
21988832
TF65_HUMANRELAphysical
9057089
NFKB1_HUMANNFKB1physical
17003112
TF65_HUMANRELAphysical
17003112
TF65_HUMANRELAphysical
24248593
TERA_HUMANVCPphysical
24248593
FBW1A_HUMANBTRCphysical
10497169
CYTSA_HUMANSPECC1Lphysical
26186194
SPDLY_HUMANSPDL1physical
26186194
NFKB2_HUMANNFKB2physical
26186194
REL_HUMANRELphysical
26186194
RPB1_HUMANPOLR2Aphysical
26186194
DCAF6_HUMANDCAF6physical
26186194
NFKB1_HUMANNFKB1physical
26186194
NEB1_HUMANPPP1R9Aphysical
26186194
TF65_HUMANRELAphysical
26186194
AIDA_HUMANAIDAphysical
26186194
RPB11_HUMANPOLR2Jphysical
26186194
ANR27_HUMANANKRD27physical
26186194
RPOM_HUMANPOLRMTphysical
26186194
YES_HUMANYES1physical
26186194
SRC_HUMANSRCphysical
26186194
RELB_HUMANRELBphysical
26186194
SCRN2_HUMANSCRN2physical
26186194
CTU2_HUMANCTU2physical
26186194
OGDHL_HUMANOGDHLphysical
26186194
OTUB1_HUMANOTUB1physical
26186194
HIF1N_HUMANHIF1ANphysical
26186194
TLDC1_HUMANTLDC1physical
26186194
PRDC1_HUMANPRTFDC1physical
26186194
FBW1B_HUMANFBXW11physical
26186194
UBFD1_HUMANUBFD1physical
26186194
IKKA_HUMANCHUKphysical
26186194
IKBB_HUMANNFKBIBphysical
26186194
TBC24_HUMANTBC1D24physical
26186194
RHOA_HUMANRHOAphysical
26186194
TCEA1_HUMANTCEA1physical
26186194
DENR_HUMANDENRphysical
26186194
BIRC2_HUMANBIRC2physical
26186194
TBCE_HUMANTBCEphysical
26186194
GBG5_HUMANGNG5physical
26186194
CUED1_HUMANCUEDC1physical
26186194
ARMT1_HUMANC6orf211physical
26186194
CHAC2_HUMANCHAC2physical
26186194
MAVS_HUMANMAVSphysical
25636800
UBC9_HUMANUBE2Iphysical
9409737
CENPF_HUMANCENPFphysical
26496610
CO7A1_HUMANCOL7A1physical
26496610
ATX3_HUMANATXN3physical
26496610
NFKB1_HUMANNFKB1physical
26496610
NFKB2_HUMANNFKB2physical
26496610
IKBE_HUMANNFKBIEphysical
26496610
REL_HUMANRELphysical
26496610
TF65_HUMANRELAphysical
26496610
NEMO_HUMANIKBKGphysical
26496610
AVL9_HUMANAVL9physical
26496610
MED31_HUMANMED31physical
26496610
RHG39_HUMANARHGAP39physical
26496610
TF65_HUMANRELAphysical
26463447
FBW1A_HUMANBTRCphysical
20851351
REL_HUMANRELphysical
28514442
RELB_HUMANRELBphysical
28514442
TF65_HUMANRELAphysical
28514442
NFKB2_HUMANNFKB2physical
28514442
NFKB1_HUMANNFKB1physical
28514442
ANR27_HUMANANKRD27physical
28514442
IKBB_HUMANNFKBIBphysical
28514442
OGDHL_HUMANOGDHLphysical
28514442
IKKA_HUMANCHUKphysical
28514442
TBC24_HUMANTBC1D24physical
28514442
HIF1N_HUMANHIF1ANphysical
28514442
AIDA_HUMANAIDAphysical
28514442
TBCE_HUMANTBCEphysical
28514442
SPDLY_HUMANSPDL1physical
28514442
NEB1_HUMANPPP1R9Aphysical
28514442
SRC_HUMANSRCphysical
28514442
SCRN2_HUMANSCRN2physical
28514442
PRDC1_HUMANPRTFDC1physical
28514442
CUED1_HUMANCUEDC1physical
28514442
CYTSA_HUMANSPECC1Lphysical
28514442
TCEA1_HUMANTCEA1physical
28514442
FBW1B_HUMANFBXW11physical
28514442
RPB1_HUMANPOLR2Aphysical
28514442
MCTS1_HUMANMCTS1physical
28514442
DENR_HUMANDENRphysical
28514442
ARMT1_HUMANC6orf211physical
28514442
GNA1_HUMANGNPNAT1physical
28514442
RPOM_HUMANPOLRMTphysical
28514442
RHOA_HUMANRHOAphysical
28514442
GBG5_HUMANGNG5physical
28514442
PLSI_HUMANPLS1physical
28514442

Drug and Disease Associations
Kegg Disease
There are no disease associations of PTM sites.
OMIM Disease
612132Ectodermal dysplasia, anhidrotic, with T-cell immunodeficiency autosomal dominant (ADEDAID)
Kegg Drug
There are no disease associations of PTM sites.
DrugBank
DB00945Acetylsalicylic acid
Regulatory Network of IKBA_HUMAN

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Related Literatures of Post-Translational Modification
Hydroxylation
ReferencePubMed
"Posttranslational hydroxylation of ankyrin repeats in IkappaBproteins by the hypoxia-inducible factor (HIF) asparaginylhydroxylase, factor inhibiting HIF (FIH).";
Cockman M.E., Lancaster D.E., Stolze I.P., Hewitson K.S.,McDonough M.A., Coleman M.L., Coles C.H., Yu X., Hay R.T., Ley S.C.,Pugh C.W., Oldham N.J., Masson N., Schofield C.J., Ratcliffe P.J.;
Proc. Natl. Acad. Sci. U.S.A. 103:14767-14772(2006).
Cited for: INTERACTION WITH HIF1AN, HYDROXYLATION AT ASN-210 AND ASN-244, ANDMUTAGENESIS OF ASN-210 AND ASN-244.
Phosphorylation
ReferencePubMed
"IKK epsilon is part of a novel PMA-inducible IkappaB kinasecomplex.";
Peters R.T., Liao S.-M., Maniatis T.;
Mol. Cell 5:513-522(2000).
Cited for: PHOSPHORYLATION AT SER-32 AND SER-36.
"Identification of the ubiquitin carrier proteins, E2s, involved insignal-induced conjugation and subsequent degradation ofIkappaBalpha.";
Gonen H., Bercovich B., Orian A., Carrano A., Takizawa C.,Yamanaka K., Pagano M., Iwai K., Ciechanover A.;
J. Biol. Chem. 274:14823-14830(1999).
Cited for: PHOSPHORYLATION AT SER-32 AND SER-36, MUTAGENESIS OF SER-32 ANDSER-36, AND UBIQUITINATION BY UBE2D2 AND UBE2D3.
"Phosphorylation of IkappaBalpha in the C-terminal PEST domain bycasein kinase II affects intrinsic protein stability.";
Lin R., Beauparlant P., Makris C., Meloche S., Hiscott J.;
Mol. Cell. Biol. 16:1401-1409(1996).
Cited for: PHOSPHORYLATION AT THR-291; SER-283 AND THR-299.
"Casein kinase II phosphorylates I kappa B alpha at S-283, S-289, S-293, and T-291 and is required for its degradation.";
McElhinny J.A., Trushin S.A., Bren G.D., Chester N., Paya C.V.;
Mol. Cell. Biol. 16:899-906(1996).
Cited for: PHOSPHORYLATION AT SER-283; SER-288; SER-293 AND THR-291.
"Tyrosine phosphorylation of IkappaB-alpha activates NF-kappaB withoutproteolytic degradation of IkappaB-alpha.";
Imbert V., Rupec R.A., Livolsi A., Pahl H.L., Traenckner E.B.-M.,Mueller-Dieckmann C., Farahifar D., Rossi B., Auberger P.,Baeuerle P.A., Peyron J.-F.;
Cell 86:787-798(1996).
Cited for: PHOSPHORYLATION AT TYR-42, AND MUTAGENESIS OF TYR-42.
Ubiquitylation
ReferencePubMed
"Priming and extending: a UbcH5/Cdc34 E2 handoff mechanism forpolyubiquitination on a SCF substrate.";
Wu K., Kovacev J., Pan Z.Q.;
Mol. Cell 37:784-796(2010).
Cited for: UBIQUITINATION AT LYS-21 AND LYS-22.
"Signal-induced degradation of IkappaB alpha requires site-specificubiquitination.";
Scherer D.C., Brockman J.A., Chen Z., Maniatis T., Ballard D.W.;
Proc. Natl. Acad. Sci. U.S.A. 92:11259-11263(1995).
Cited for: UBIQUITINATION AT LYS-21 AND LYS-22, FUNCTION, AND MUTAGENESIS OFLYS-21; LYS-22; LYS-38 AND LYS-47.

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