RM40_YEAST - dbPTM
RM40_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RM40_YEAST
UniProt AC P36534
Protein Name 54S ribosomal protein L40, mitochondrial
Gene Name MRPL40
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 297
Subcellular Localization Mitochondrion . Mitoribosomes are tethered to the mitochondrial inner membrane and spatially aligned with the membrane insertion machinery through two distinct membrane contact sites, formed by the 21S rRNA expansion segment 96-ES1 and the inner memb
Protein Description Component of the mitochondrial ribosome (mitoribosome), a dedicated translation machinery responsible for the synthesis of mitochondrial genome-encoded proteins, including at least some of the essential transmembrane subunits of the mitochondrial respiratory chain. The mitoribosomes are attached to the mitochondrial inner membrane and translation products are cotranslationally integrated into the membrane..
Protein Sequence MSGSYQHLSNVGSRVMKRLGNRPKNFLPHSEKFIKKSTPEFMKSDLKEVDEKTSFKSEKEWKFIPGDRVVVMSGASKGNIAVIKSFDKRTNSFILDENGPTKTVPVPKQFWLEGQTSHMITIPVSILGKDLRLVADIDDEKTPGKTRTVAVRDVSFNGSYYDADYKKVMPYRCVKGQPDLIIPWPKPDPIDVQTNLATDPVIAREQTFWVDSVVRNPIPKKAIPSIRNPHSKYKRGTLTAKDIAKLVAPEMPLTEVRKSHLAEKKELAEREVPKLTEEDMEAIGARVFEFLEKQKRE
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
2Acetylation------MSGSYQHLS
------CCCCCHHHH
36.1222814378
32AcetylationNFLPHSEKFIKKSTP
CCCCCCHHHHHHCCH
56.2422865919
52AcetylationDLKEVDEKTSFKSEK
HHHHCCCCCCCCCHH
45.0324489116
85PhosphorylationGNIAVIKSFDKRTNS
CCEEEEEEECCCCCE
27.7922890988
90PhosphorylationIKSFDKRTNSFILDE
EEEECCCCCEEEECC
40.7422890988
92PhosphorylationSFDKRTNSFILDENG
EECCCCCEEEECCCC
17.0422890988
101PhosphorylationILDENGPTKTVPVPK
EECCCCCCCEECCCC
40.5222890988
141AcetylationVADIDDEKTPGKTRT
EEECCCCCCCCCEEE
67.9924489116
155PhosphorylationTVAVRDVSFNGSYYD
EEEEEEEEECCCEEC
19.7928889911
293AcetylationRVFEFLEKQKRE---
HHHHHHHHHHCC---
64.3724489116

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RM40_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RM40_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RM40_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
ATG17_YEASTATG17physical
18719252
SIF2_YEASTSIF2physical
18719252
TIM17_YEASTTIM17physical
19783770
OXA1_YEASTOXA1physical
19783770
RM41_YEASTMRP20physical
19783770
RM41_YEASTMRP20physical
20404317
RM27_YEASTMRPL27physical
20404317
RM13_YEASTMRPL13physical
20404317
MRH4_YEASTMRH4physical
24206665
PER1_YEASTPER1genetic
27708008
IMG2_YEASTIMG2genetic
27708008
RPN4_YEASTRPN4genetic
27708008
IPT1_YEASTIPT1genetic
27708008
RMD8_YEASTRMD8genetic
27708008
SKN1_YEASTSKN1genetic
27708008
AZR1_YEASTAZR1genetic
27708008
IST3_YEASTIST3genetic
27708008
RL22A_YEASTRPL22Agenetic
27708008
ELO3_YEASTELO3genetic
27708008
SHE1_YEASTSHE1genetic
27708008
H4_YEASTHHF1genetic
27708008
PFF1_YEASTPFF1genetic
27708008
AIM4_YEASTAIM4genetic
27708008
MGR1_YEASTMGR1genetic
27708008
CRD1_YEASTCRD1genetic
27708008
GLT1_YEASTGLT1genetic
27708008
PAA1_YEASTPAA1genetic
27708008
RMD5_YEASTRMD5genetic
27708008
HKR1_YEASTHKR1genetic
27708008
TRPE_YEASTTRP2genetic
27708008
WWM1_YEASTWWM1genetic
27708008
GCN20_YEASTGCN20genetic
27708008
ALK1_YEASTALK1genetic
27708008
RL24A_YEASTRPL24Agenetic
27708008
MED5_YEASTNUT1genetic
27708008
RAD54_YEASTRAD54genetic
27708008
GCN1_YEASTGCN1genetic
27708008
SLX9_YEASTSLX9genetic
27708008
PBP1_YEASTPBP1genetic
27708008
SNF6_YEASTSNF6genetic
27708008
OCA5_YEASTOCA5genetic
27708008
PPME1_YEASTPPE1genetic
27708008
FYV10_YEASTFYV10genetic
27708008
ALLA_YEASTDAL3genetic
27708008
CBPS_YEASTCPS1genetic
27708008
MPCP_YEASTMIR1genetic
27708008
RL43A_YEASTRPL43Bgenetic
27708008
RL43B_YEASTRPL43Bgenetic
27708008
YJ90_YEASTYJR120Wgenetic
27708008
DHOM_YEASTHOM6genetic
27708008
IXR1_YEASTIXR1genetic
27708008
MEH1_YEASTMEH1genetic
27708008
RS21A_YEASTRPS21Agenetic
27708008
SRL3_YEASTSRL3genetic
27708008
MHT1_YEASTMHT1genetic
27708008
IZH3_YEASTIZH3genetic
27708008
YL036_YEASTYLR036Cgenetic
27708008
LAM6_YEASTYLR072Wgenetic
27708008
RL37A_YEASTRPL37Agenetic
27708008
ATG26_YEASTATG26genetic
27708008
TSA1_YEASTTSA1genetic
27708008
MGR3_YEASTMGR3genetic
27708008
YM54_YEASTYMR196Wgenetic
27708008
ESC1_YEASTESC1genetic
27708008
SCW10_YEASTSCW10genetic
27708008
RNH2A_YEASTRNH201genetic
27708008
MKT1_YEASTMKT1genetic
27708008
YNK8_YEASTYNL108Cgenetic
27708008
EAF7_YEASTEAF7genetic
27708008
ATO2_YEASTATO2genetic
27708008
ASE1_YEASTASE1genetic
27708008
VAM3_YEASTVAM3genetic
27708008
TYE7_YEASTTYE7genetic
27708008
YME1_YEASTYME1genetic
27708008
CHMU_YEASTARO7genetic
27708008
ATPA_YEASTATP1genetic
27811238
IKZF1_HUMANIKZF1physical
27107014

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RM40_YEAST

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Related Literatures of Post-Translational Modification

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