RM13_YEAST - dbPTM
RM13_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RM13_YEAST
UniProt AC Q02204
Protein Name 54S ribosomal protein L13, mitochondrial
Gene Name MRPL13
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 264
Subcellular Localization Mitochondrion . Mitoribosomes are tethered to the mitochondrial inner membrane and spatially aligned with the membrane insertion machinery through two distinct membrane contact sites, formed by the 21S rRNA expansion segment 96-ES1 and the inner memb
Protein Description Component of the mitochondrial ribosome (mitoribosome), a dedicated translation machinery responsible for the synthesis of mitochondrial genome-encoded proteins, including at least some of the essential transmembrane subunits of the mitochondrial respiratory chain. The mitoribosomes are attached to the mitochondrial inner membrane and translation products are cotranslationally integrated into the membrane..
Protein Sequence MSSLLKLHCIRPLPQRSVWLSGYKQKARCIHSSAANGDFMSWFKRKKQEEHQEPVKDTKQLIKDIEEGTNEASSQSSSNNKNRLELIPENFIGEGSRRCKRQKELKLAVSSAPFNQWLSRDKITSDNQLDDMILQATEKTLGKVDQDVQFSDLVAKFQFTKFLQSKSGYLIPDYELTTLSTPLQFKRYIKEKILPSANDPKLAYKEAEPNAIHPFSDNYASPNIYVVNDVTSKEQKSKYDTIMKEIQKLEDDATRKALETARSA
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
63AcetylationKDTKQLIKDIEEGTN
CCHHHHHHHHHHHCC
62.3324489116
76PhosphorylationTNEASSQSSSNNKNR
CCCCCCCCCCCCCCC
37.3728889911
77PhosphorylationNEASSQSSSNNKNRL
CCCCCCCCCCCCCCE
29.4628889911
78PhosphorylationEASSQSSSNNKNRLE
CCCCCCCCCCCCCEE
50.0628889911
124PhosphorylationWLSRDKITSDNQLDD
HHCCCCCCCCHHHHH
35.4529688323
125PhosphorylationLSRDKITSDNQLDDM
HCCCCCCCCHHHHHH
37.7329688323
137PhosphorylationDDMILQATEKTLGKV
HHHHHHHHHHHHCCC
25.6729688323
139AcetylationMILQATEKTLGKVDQ
HHHHHHHHHHCCCCC
44.7024489116
161AcetylationVAKFQFTKFLQSKSG
HHHHHHHHHHHCCCC
45.4224489116
167PhosphorylationTKFLQSKSGYLIPDY
HHHHHCCCCEECCCC
37.6119823750
169PhosphorylationFLQSKSGYLIPDYEL
HHHCCCCEECCCCEE
14.4619823750
174PhosphorylationSGYLIPDYELTTLST
CCEECCCCEEECCCC
13.9019823750
177PhosphorylationLIPDYELTTLSTPLQ
ECCCCEEECCCCCHH
17.4719823750
178PhosphorylationIPDYELTTLSTPLQF
CCCCEEECCCCCHHH
31.1919823750
180PhosphorylationDYELTTLSTPLQFKR
CCEEECCCCCHHHHH
26.3619823750
181PhosphorylationYELTTLSTPLQFKRY
CEEECCCCCHHHHHH
31.0019823750
188PhosphorylationTPLQFKRYIKEKILP
CCHHHHHHHHHHHCC
19.5519823750
201AcetylationLPSANDPKLAYKEAE
CCCCCCCCCCCCCCC
48.9224489116

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RM13_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RM13_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RM13_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
RM04_YEASTMRPL4physical
20404317
RM41_YEASTMRP20physical
20404317
RM40_YEASTMRPL40physical
20404317
RQC2_YEASTTAE2genetic
20691087
NOP2_YEASTNOP2genetic
27708008
SEC12_YEASTSEC12genetic
27708008
AAR2_YEASTAAR2genetic
27708008
CND2_YEASTBRN1genetic
27708008
ARPC1_YEASTARC40genetic
27708008
RPB1_YEASTRPO21genetic
27708008
DBF4_YEASTDBF4genetic
27708008
LCB2_YEASTLCB2genetic
27708008
COPB_YEASTSEC26genetic
27708008
TRS23_YEASTTRS23genetic
27708008
SEC20_YEASTSEC20genetic
27708008
TSC11_YEASTTSC11genetic
27708008
COG3_YEASTCOG3genetic
27708008
ACT_YEASTACT1genetic
27708008
PRP43_YEASTPRP43genetic
27708008
COPB2_YEASTSEC27genetic
27708008
COG2_YEASTCOG2genetic
27708008
YIP1_YEASTYIP1genetic
27708008
BRL1_YEASTBRL1genetic
27708008
YKT6_YEASTYKT6genetic
27708008
SEC22_YEASTSEC22genetic
27708008
RU1C_YEASTYHC1genetic
27708008
SEN1_YEASTSEN1genetic
27708008
VTI1_YEASTVTI1genetic
27708008
CH10_YEASTHSP10genetic
27708008
UFE1_YEASTUFE1genetic
27708008
RPB2_YEASTRPB2genetic
27708008
RAEP_YEASTMRS6genetic
27708008
HRR25_YEASTHRR25genetic
27708008
RDS3_YEASTRDS3genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RM13_YEAST

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Related Literatures of Post-Translational Modification

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