RRP9_YEAST - dbPTM
RRP9_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RRP9_YEAST
UniProt AC Q06506
Protein Name Ribosomal RNA-processing protein 9
Gene Name RRP9
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 573
Subcellular Localization Nucleus, nucleolus .
Protein Description Involved in nucleolar processing of pre-18S ribosomal RNA. Required for efficient pre-rRNA cleavage at sites A0, A1 and A2, and biosynthesis of 18S rRNA..
Protein Sequence MSDVTQQKKRKRSKGEVNPSKPTVDEEITDPSSNEDEQLEVSDEEDALESEEEFEGENPADKRRRLAKQYLENLKSEANDILTDNRNAEEKDLNNLKERTIDEYNNFDAGDLDKDIIASRLKEDVAEQQGRVFRYFGDKLLISEAKQSFTRVGENNLTCISCFQPVLNKYTFEESSNGDKNKGRLFAYTVSKDLQLTKYDITDFSKRPKKLKYAKGGAKYIPTSKHEYENTTEGHYDEILTVAASPDGKYVVTGGRDRKLIVWSTESLSPVKVIPTKDRRGEVLSLAFRKNSDQLYASCADFKIRTYSINQFSQLEILYGHHDIVEDISALAMERCVTVGARDRTAMLWKIPDETRLTFRGGDEPQKLLRRWMKENAKEGEDGEVKYPDESEAPLFFCEGSIDVVSMVDDFHFITGSDNGNICLWSLAKKKPIFTERIAHGILPEPSFNDISGETDEELRKRQLQGKKLLQPFWITSLYAIPYSNVFISGSWSGSLKVWKISDNLRSFELLGELSGAKGVVTKIQVVESGKHGKEKFRILASIAKEHRLGRWIANVSGARNGIYSAVIDQTGF
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure		 ASA (%) Reference Orthologous
Protein Cluster
2Acetylation------MSDVTQQKK
------CCHHHHHHH		40.5622814378
2Phosphorylation------MSDVTQQKK
------CCHHHHHHH		40.5627717283
29PhosphorylationPTVDEEITDPSSNED
CCCCCCCCCCCCCCC		45.1719795423
50PhosphorylationDEEDALESEEEFEGE
CHHHHHHCHHHHCCC		51.6728889911
68AcetylationDKRRRLAKQYLENLK
HHHHHHHHHHHHHHH		44.0325381059
70PhosphorylationRRRLAKQYLENLKSE
HHHHHHHHHHHHHHH		18.4419779198
76PhosphorylationQYLENLKSEANDILT
HHHHHHHHHHHHHHC		45.1421440633
100PhosphorylationLNNLKERTIDEYNNF
HHHHHHHCHHHHCCC		33.5920377248
104PhosphorylationKERTIDEYNNFDAGD
HHHCHHHHCCCCHHH		16.2021440633
114AcetylationFDAGDLDKDIIASRL
CCHHHCCHHHHHHHH		59.1124489116
175PhosphorylationNKYTFEESSNGDKNK
HCCCCEECCCCCCCC		23.1627717283
176PhosphorylationKYTFEESSNGDKNKG
CCCCEECCCCCCCCC		48.3823749301
198UbiquitinationSKDLQLTKYDITDFS
CCCCCCCCCCCCCCC		49.9024961812
269PhosphorylationVWSTESLSPVKVIPT
EEECCCCCCCEEEEC		36.6128152593
290UbiquitinationVLSLAFRKNSDQLYA
EEEEEEECCCCHHHH		55.1123749301
Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RRP9_YEAST !!
Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RRP9_YEAST !!
Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10) 		Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RRP9_YEAST !!
Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
RRP9_YEASTRRP9physical
14759368
UTP20_YEASTUTP20physical
11805837
PROB_YEASTPRO1physical
11805837
RRT6_YEASTRRT6physical
11805837
AVO1_YEASTAVO1physical
11805837
NOP58_YEASTNOP58physical
11805837
KRR1_YEASTKRR1physical
12150911
PWP2_YEASTPWP2physical
12150911
BMS1_YEASTBMS1physical
12150911
DHR1_YEASTECM16physical
12150911
IMP4_YEASTIMP4physical
12150911
NAT10_YEASTKRE33physical
12150911
MPP10_YEASTMPP10physical
12150911
UTP17_YEASTNAN1physical
12150911
NOC4_YEASTNOC4physical
12150911
NOP14_YEASTNOP14physical
12150911
NOP56_YEASTNOP56physical
12150911
RCL1_YEASTRCL1physical
12150911
RS13_YEASTRPS13physical
12150911
RS4A_YEASTRPS4Aphysical
12150911
RS4B_YEASTRPS4Aphysical
12150911
RS5_YEASTRPS5physical
12150911
RRP5_YEASTRRP5physical
12150911
DCA13_YEASTSOF1physical
12150911
UTP20_YEASTUTP20physical
12150911
UTP4_YEASTUTP4physical
12150911
UTP6_YEASTUTP6physical
12150911
UTP22_YEASTUTP22physical
12150911
UTP9_YEASTUTP9physical
12150911
UTP10_YEASTUTP10physical
12150911
UTP13_YEASTUTP13physical
12150911
UTP15_YEASTUTP15physical
12150911
DIM1_YEASTDIM1physical
12150911
FBRL_YEASTNOP1physical
15231838
BMS1_YEASTBMS1physical
16429126
DIM1_YEASTDIM1physical
16429126
DHR1_YEASTECM16physical
16429126
IMP4_YEASTIMP4physical
16429126
MPP10_YEASTMPP10physical
16429126
NOC4_YEASTNOC4physical
16429126
NOP14_YEASTNOP14physical
16429126
PWP2_YEASTPWP2physical
16429126
RCL1_YEASTRCL1physical
16429126
RS13_YEASTRPS13physical
16429126
RS4A_YEASTRPS4Aphysical
16429126
RS4B_YEASTRPS4Aphysical
16429126
UTP10_YEASTUTP10physical
16429126
UTP13_YEASTUTP13physical
16429126
UTP22_YEASTUTP22physical
16429126
UTP6_YEASTUTP6physical
16429126
NAT10_YEASTKRE33physical
16429126
RRP5_YEASTRRP5physical
16429126
NOP56_YEASTNOP56physical
16429126
UTP15_YEASTUTP15physical
16429126
UTP20_YEASTUTP20physical
16429126
UTP9_YEASTUTP9physical
16429126
UTP17_YEASTNAN1physical
16429126
UTP4_YEASTUTP4physical
16429126
RS5_YEASTRPS5physical
16429126
SHG1_YEASTSHG1genetic
27708008
PER1_YEASTPER1genetic
27708008
GTR2_YEASTGTR2genetic
27708008
INM1_YEASTINM1genetic
27708008
MCR1_YEASTMCR1genetic
27708008
STB4_YEASTSTB4genetic
27708008
CSI1_YEASTCSI1genetic
27708008
PRP6_YEASTPRP6genetic
27708008
APC11_YEASTAPC11genetic
27708008
FBRL_YEASTNOP1genetic
27708008
FAL1_YEASTFAL1genetic
27708008
FCF1_YEASTFCF1genetic
27708008
UTP6_YEASTUTP6genetic
27708008
RMRP_YEASTSNM1genetic
27708008
GNA1_YEASTGNA1genetic
27708008
NEP1_YEASTEMG1genetic
27708008
NOP56_YEASTNOP56genetic
27708008
RRP5_YEASTRRP5genetic
27708008
ERS1_YEASTERS1genetic
27708008
RRP8_YEASTRRP8genetic
27708008
MAL12_YEASTMAL12genetic
27708008
PIH1_YEASTPIH1genetic
27708008
AIM18_YEASTAIM18genetic
27708008
SYG1_YEASTSYG1genetic
27708008
UBL1_YEASTYUH1genetic
27708008
TPO5_YEASTTPO5genetic
27708008
SAC1_YEASTSAC1genetic
27708008
RL1D1_YEASTUTP30genetic
27708008
MKT1_YEASTMKT1genetic
27708008
BUD21_YEASTBUD21genetic
27708008
PUS7_YEASTPUS7genetic
27708008
PDR10_YEASTPDR10genetic
27708008
Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RRP9_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-50, AND MASSSPECTROMETRY.

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