NECD_HUMAN - dbPTM
NECD_HUMAN - PTM Information in dbPTM
Basic Information of Protein
UniProt ID NECD_HUMAN
UniProt AC Q99608
Protein Name Necdin
Gene Name NDN
Organism Homo sapiens (Human).
Sequence Length 321
Subcellular Localization Perikaryon. Nucleus. Neural perikarya, translocates to the nucleus of postmitotic neurons and interacts with the nuclear matrix.
Protein Description Growth suppressor that facilitates the entry of the cell into cell cycle arrest. Functionally similar to the retinoblastoma protein it binds to and represses the activity of cell-cycle-promoting proteins such as SV40 large T antigen, adenovirus E1A, and the transcription factor E2F. Necdin also interacts with p53 and works in an additive manner to inhibit cell growth. Functions also as transcription factor and binds directly to specific guanosine-rich DNA sequences (By similarity)..
Protein Sequence MSEQSKDLSDPNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAAPPPQAPNDEGDPKALQQAAEEGRAHQAPSAAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIWFPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRMPMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALEEARALREANPTAHYPRSSVSED
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
116AcetylationVLVKDQKKMIIWFPD
EEECCCCEEEEECHH
29.6912436801
126AcetylationIWFPDMVKDVIGSYK
EECHHHHHHHHHHHH
39.3712436811
132PhosphorylationVKDVIGSYKKWCRSI
HHHHHHHHHHHHHHH
16.0425884760
159PhosphorylationGLHLRLTSLHTMEFA
CHHHHHHHHCHHHHH
23.8126852163
162PhosphorylationLRLTSLHTMEFALVK
HHHHHHCHHHHHHHH
24.5626852163
188PhosphorylationLSNRMPMTGLLLMIL
HHCCCCHHHHHHHHH
20.86-
196PhosphorylationGLLLMILSLIYVKGR
HHHHHHHHHHHHCCC
11.2022210691
199PhosphorylationLMILSLIYVKGRGAR
HHHHHHHHHCCCCHH
11.0322210691
223UbiquitinationILGLRPWKKHSTFGD
HHCCCCCCCCCCHHH
43.2021890473
252PhosphorylationLKYQRVPYVEPPEYE
CCCCCCCCCCCCCCC
18.0029759185
272UbiquitinationRASREITKMQIMEFL
CCCHHHHHHHHHHHH
34.17-
285UbiquitinationFLARVFKKDPQAWPS
HHHHHHHHCCCCCHH
64.28-
313PhosphorylationEANPTAHYPRSSVSE
HHCCCCCCCCCCCCC
9.6228111955
316PhosphorylationPTAHYPRSSVSED--
CCCCCCCCCCCCC--
30.5026699800
317PhosphorylationTAHYPRSSVSED---
CCCCCCCCCCCC---
30.8326699800
319PhosphorylationHYPRSSVSED-----
CCCCCCCCCC-----
37.6926699800

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of NECD_HUMAN !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of NECD_HUMAN !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of NECD_HUMAN !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
E2F1_HUMANE2F1physical
9422723
NUBP1_HUMANNUBP1physical
10915798
TMM33_HUMANTMEM33physical
17353931
RS11_HUMANRPS11physical
17353931
SRPRB_HUMANSRPRBphysical
17353931
CERS2_HUMANCERS2physical
17353931
DHCR7_HUMANDHCR7physical
17353931
S61A1_HUMANSEC61A1physical
17353931
AUP1_HUMANAUP1physical
17353931
E2F1_HUMANE2F1physical
14593116
TNR16_HUMANNGFRphysical
14593116
TNR16_HUMANNGFRphysical
12414813
NECD_HUMANNDNphysical
10915798
NUCB2_HUMANNUCB2physical
10915798
P53_HUMANTP53physical
10347180
HNRPU_HUMANHNRNPUphysical
11813259
TIF1B_HUMANTRIM28physical
20864041
HIF1A_HUMANHIF1Aphysical
15978586
TNPO1_HUMANTNPO1physical
22442722
IMB1_HUMANKPNB1physical
22442722
EID3_HUMANEID3physical
21364888
NSE4A_HUMANNSMCE4Aphysical
21364888
EID1_HUMANEID1physical
21364888
EID2_HUMANEID2physical
21364888
EID2B_HUMANEID2Bphysical
21364888
EPAS1_HUMANEPAS1physical
23785149
MPP6_HUMANMPP6physical
20195357
P53_HUMANTP53physical
24722188
AB1IP_HUMANAPBB1IPphysical
24722188
CACO2_HUMANCALCOCO2physical
24722188
CC136_HUMANCCDC136physical
24722188
CDR2_HUMANCDR2physical
24722188
DTBP1_HUMANDTNBP1physical
24722188
EID1_HUMANEID1physical
24722188
F131C_HUMANFAM131Cphysical
24722188
FSD2_HUMANFSD2physical
24722188
FXR2_HUMANFXR2physical
24722188
GKAP1_HUMANGKAP1physical
24722188
GOGA2_HUMANGOLGA2physical
24722188
IFFO1_HUMANIFFO1physical
24722188
LAX1_HUMANLAX1physical
24722188
LPXN_HUMANLPXNphysical
24722188
MIER2_HUMANMIER2physical
24722188
MKRN2_HUMANMKRN2physical
24722188
EFMT1_HUMANN6AMT2physical
24722188
NFL_HUMANNEFLphysical
24722188
P4HA3_HUMANP4HA3physical
24722188
BL1S6_HUMANBLOC1S6physical
24722188
LIPA1_HUMANPPFIA1physical
24722188
SRTD3_HUMANSERTAD3physical
24722188
ADIP_HUMANSSX2IPphysical
24722188
TFP11_HUMANTFIP11physical
24722188
U2AF1_HUMANU2AF1physical
24722188
ZBTB1_HUMANZBTB1physical
24722188
ZBT7B_HUMANZBTB7Bphysical
24722188
PRGC1_HUMANPPARGC1Aphysical
26971449
P53_HUMANTP53physical
18753379
SIR1_HUMANSIRT1physical
18753379
LEPR_HUMANLEPRphysical
28973533

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of NECD_HUMAN

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Related Literatures of Post-Translational Modification

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