LIPA1_HUMAN - dbPTM
LIPA1_HUMAN - PTM Information in dbPTM
Basic Information of Protein
UniProt ID LIPA1_HUMAN
UniProt AC Q13136
Protein Name Liprin-alpha-1
Gene Name PPFIA1
Organism Homo sapiens (Human).
Sequence Length 1202
Subcellular Localization Cytoplasm . Colocalizes with PTPRF at the ends of focal adhesions most proximal to the cell nucleus.
Protein Description May regulate the disassembly of focal adhesions. May localize receptor-like tyrosine phosphatases type 2A at specific sites on the plasma membrane, possibly regulating their interaction with the extracellular environment and their association with substrates..
Protein Sequence MMCEVMPTISEAEGPPGGGGGHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRERLRVALERCSLLEEELGATHKELMILKEQNNQKKTLTDGVLDINHEQENTPSTSGKRSSDGSLSHEEDLAKVIELQEIISKQSREQSQMKERLASLSSHVTELEEDLDTARKDLIKSEEMNTKLQRDVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKDSMHRQTEDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQMEAQLEEKNQELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNSLLREVESAKKQLEETQHDKDQLVLNIEALRAELDHMRLRGASLHHGRPHLGSVPDFRFPMADGHTDSYSTSAVLRRPQKGRLAALRDEPSKVQTLNEQDWERAQQASVLANVAQAFESDADVSDGEDDRDTLLSSVDLLSPSGQADAHTLAMMLQEQLDAINKEIRLIQEEKENTEQRAEEIESRVGSGSLDNLGRFRSMSSIPPYPASSLASSSPPGSGRSTPRRIPHSPAREVDRLGVMTLLPPSREEVRDDKTTIKCETSPPSSPRALRLDRLHKGALHTVSHEDIRDIRNSTGSQDGPVSNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRPGQTGKEALGQAGVSETDNSSQDALGLSKLGGQAEKNRKLQKKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRRLNYDRKELERKREESQSEIKDVLVWSNDRVIRWILSIGLKEYANNLIESGVHGALLALDETFDFSALALLLQIPTQNTQARAVLEREFNNLLVMGTDRRFDEDDDKSFRRAPSWRKKFRPKDIRGLAAGSAETLPANFRVTSSMSSPSMQPKKMQMDGNVSGTQRLDSATVRTYSC
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
8PhosphorylationMMCEVMPTISEAEGP
CCCEECCCEECCCCC
21.0228348404
10PhosphorylationCEVMPTISEAEGPPG
CEECCCEECCCCCCC
32.9828348404
24PhosphorylationGGGGGHGSGSPSQPD
CCCCCCCCCCCCCCC
30.3526074081
26PhosphorylationGGGHGSGSPSQPDAD
CCCCCCCCCCCCCCC
24.0726074081
28PhosphorylationGHGSGSPSQPDADSH
CCCCCCCCCCCCCHH
56.9226074081
34PhosphorylationPSQPDADSHFEQLMV
CCCCCCCHHHHHHHH
31.6226074081
77PhosphorylationEVGHERDSLQRQLNT
HHHCCHHHHHHHHHH
32.4029496963
95UbiquitinationQEFAALTKELNVCRE
HHHHHHHHHHHHHHH
62.14-
138PhosphorylationLVSRHERSLRMTVVK
HHHHCHHHHHEEEEH
19.83-
150PhosphorylationVVKRQAQSPAGVSSE
EEHHHCCCCCCCCHH
21.5225159151
150 (in isoform 2)Phosphorylation-21.52-
155PhosphorylationAQSPAGVSSEVEVLK
CCCCCCCCHHHHHHH
21.6229978859
156PhosphorylationQSPAGVSSEVEVLKA
CCCCCCCHHHHHHHH
43.1629396449
156 (in isoform 2)Phosphorylation-43.16-
172UbiquitinationKSLFEHHKALDEKVR
HHHHHHHHHHHHHHH
53.18-
190PhosphorylationRVALERCSLLEEELG
HHHHHHHHHHHHHHC
42.0622210691
199PhosphorylationLEEELGATHKELMIL
HHHHHCCCHHHHHHH
31.5122210691
215PhosphorylationEQNNQKKTLTDGVLD
HHCCCCCCCCCCCCC
41.7621406692
217PhosphorylationNNQKKTLTDGVLDIN
CCCCCCCCCCCCCCC
35.6221406692
230PhosphorylationINHEQENTPSTSGKR
CCCCCCCCCCCCCCC
20.1923927012
230 (in isoform 2)Phosphorylation-20.19-
232 (in isoform 2)Phosphorylation-32.9221406692
232PhosphorylationHEQENTPSTSGKRSS
CCCCCCCCCCCCCCC
32.9225850435
233 (in isoform 2)Phosphorylation-42.5821406692
233PhosphorylationEQENTPSTSGKRSSD
CCCCCCCCCCCCCCC
42.5825850435
234PhosphorylationQENTPSTSGKRSSDG
CCCCCCCCCCCCCCC
46.8025159151
236AcetylationNTPSTSGKRSSDGSL
CCCCCCCCCCCCCCC
49.2026051181
238PhosphorylationPSTSGKRSSDGSLSH
CCCCCCCCCCCCCCC
35.9529255136
238 (in isoform 2)Phosphorylation-35.95-
239PhosphorylationSTSGKRSSDGSLSHE
CCCCCCCCCCCCCCH
50.4529255136
239 (in isoform 2)Phosphorylation-50.4521406692
242PhosphorylationGKRSSDGSLSHEEDL
CCCCCCCCCCCHHHH
31.5229255136
242 (in isoform 2)Phosphorylation-31.5221406692
244PhosphorylationRSSDGSLSHEEDLAK
CCCCCCCCCHHHHHH
30.4629255136
244 (in isoform 2)Phosphorylation-30.4621406692
275PhosphorylationQMKERLASLSSHVTE
HHHHHHHHHHHHHHH
33.1228176443
277PhosphorylationKERLASLSSHVTELE
HHHHHHHHHHHHHHH
18.8625106551
278PhosphorylationERLASLSSHVTELEE
HHHHHHHHHHHHHHH
27.5429116813
281PhosphorylationASLSSHVTELEEDLD
HHHHHHHHHHHHHHH
29.4525106551
297PhosphorylationARKDLIKSEEMNTKL
HHHHHHHHHHHHHHH
31.6228464451
302PhosphorylationIKSEEMNTKLQRDVR
HHHHHHHHHHHHHHH
31.64-
337PhosphorylationLAAQREATSVHDLND
HHHHHHCCCHHHHHH
26.9124719451
338PhosphorylationAAQREATSVHDLNDK
HHHHHCCCHHHHHHH
25.2228348404
387PhosphorylationQTLRKAETLPEVEAE
HHHHHCCCCHHHHHH
53.0930624053
404UbiquitinationQRVAALSKAEERHGN
HHHHHHHHHHHHHCC
61.74-
4042-HydroxyisobutyrylationQRVAALSKAEERHGN
HHHHHHHHHHHHHCC
61.74-
448PhosphorylationEEHNKRLSDTVDKLL
HHHHHHHHHHHHHHH
34.9620363803
448 (in isoform 2)Phosphorylation-34.9621406692
450 (in isoform 2)Phosphorylation-27.5121406692
450PhosphorylationHNKRLSDTVDKLLSE
HHHHHHHHHHHHHHH
27.5120873877
456PhosphorylationDTVDKLLSESNERLQ
HHHHHHHHHCHHHHH
49.7928348404
458PhosphorylationVDKLLSESNERLQLH
HHHHHHHCHHHHHHH
40.3830624053
467UbiquitinationERLQLHLKERMAALE
HHHHHHHHHHHHHHH
32.31-
476AcetylationRMAALEDKNSLLREV
HHHHHHCHHHHHHHH
38.7819829873
4762-HydroxyisobutyrylationRMAALEDKNSLLREV
HHHHHHCHHHHHHHH
38.78-
485PhosphorylationSLLREVESAKKQLEE
HHHHHHHHHHHHHHH
51.03-
520PhosphorylationHMRLRGASLHHGRPH
HHHHCCCCCCCCCCC
30.9328152594
530PhosphorylationHGRPHLGSVPDFRFP
CCCCCCCCCCCCCCC
36.5229255136
535MethylationLGSVPDFRFPMADGH
CCCCCCCCCCCCCCC
41.98115482171
543PhosphorylationFPMADGHTDSYSTSA
CCCCCCCCCCCCCHH
31.9728674419
545PhosphorylationMADGHTDSYSTSAVL
CCCCCCCCCCCHHHH
23.3425106551
546PhosphorylationADGHTDSYSTSAVLR
CCCCCCCCCCHHHHC
20.8325394399
547PhosphorylationDGHTDSYSTSAVLRR
CCCCCCCCCHHHHCC
21.6025106551
548PhosphorylationGHTDSYSTSAVLRRP
CCCCCCCCHHHHCCC
16.6929978859
549PhosphorylationHTDSYSTSAVLRRPQ
CCCCCCCHHHHCCCC
15.5025106551
568PhosphorylationAALRDEPSKVQTLNE
CHHCCCCCCCCCCCH
43.3330266825
569UbiquitinationALRDEPSKVQTLNEQ
HHCCCCCCCCCCCHH
49.42-
572PhosphorylationDEPSKVQTLNEQDWE
CCCCCCCCCCHHHHH
34.2430266825
596PhosphorylationNVAQAFESDADVSDG
HHHHHHHCCCCCCCC
31.4827732954
601PhosphorylationFESDADVSDGEDDRD
HHCCCCCCCCCCCHH
40.2127362937
618PhosphorylationLSSVDLLSPSGQADA
HHHHHHCCCCCCCCH
25.0726074081
620PhosphorylationSVDLLSPSGQADAHT
HHHHCCCCCCCCHHH
39.9126074081
666PhosphorylationEIESRVGSGSLDNLG
HHHHHHCCCCCCCCC
23.5030266825
668PhosphorylationESRVGSGSLDNLGRF
HHHHCCCCCCCCCCC
33.9629255136
668 (in isoform 2)Phosphorylation-33.96-
677PhosphorylationDNLGRFRSMSSIPPY
CCCCCCCCCCCCCCC
21.9529396449
679PhosphorylationLGRFRSMSSIPPYPA
CCCCCCCCCCCCCCH
26.7729396449
680PhosphorylationGRFRSMSSIPPYPAS
CCCCCCCCCCCCCHH
30.3929396449
684PhosphorylationSMSSIPPYPASSLAS
CCCCCCCCCHHHCCC
13.1830278072
687PhosphorylationSIPPYPASSLASSSP
CCCCCCHHHCCCCCC
22.7530278072
688PhosphorylationIPPYPASSLASSSPP
CCCCCHHHCCCCCCC
30.0230278072
691PhosphorylationYPASSLASSSPPGSG
CCHHHCCCCCCCCCC
36.3230278072
692PhosphorylationPASSLASSSPPGSGR
CHHHCCCCCCCCCCC
41.0630278072
693PhosphorylationASSLASSSPPGSGRS
HHHCCCCCCCCCCCC
32.3930278072
693 (in isoform 2)Phosphorylation-32.39-
697PhosphorylationASSSPPGSGRSTPRR
CCCCCCCCCCCCCCC
36.4926055452
700PhosphorylationSPPGSGRSTPRRIPH
CCCCCCCCCCCCCCC
46.4123090842
701PhosphorylationPPGSGRSTPRRIPHS
CCCCCCCCCCCCCCC
21.3228985074
708PhosphorylationTPRRIPHSPAREVDR
CCCCCCCCCCCCCCC
18.2025159151
725PhosphorylationVMTLLPPSREEVRDD
EEEECCCCHHHHCCC
50.8428555341
734PhosphorylationEEVRDDKTTIKCETS
HHHCCCCCEEEEECC
40.5223403867
735PhosphorylationEVRDDKTTIKCETSP
HHCCCCCEEEEECCC
24.9523403867
740PhosphorylationKTTIKCETSPPSSPR
CCEEEEECCCCCCCC
56.8829255136
741PhosphorylationTTIKCETSPPSSPRA
CEEEEECCCCCCCCH
16.7229255136
741 (in isoform 2)Phosphorylation-16.72-
744PhosphorylationKCETSPPSSPRALRL
EEECCCCCCCCHHCC
57.2529255136
745PhosphorylationCETSPPSSPRALRLD
EECCCCCCCCHHCCH
24.9529255136
745 (in isoform 2)Phosphorylation-24.95-
756UbiquitinationLRLDRLHKGALHTVS
HCCHHHCCCCCCCCC
50.93-
761PhosphorylationLHKGALHTVSHEDIR
HCCCCCCCCCHHHHH
25.2630266825
763PhosphorylationKGALHTVSHEDIRDI
CCCCCCCCHHHHHHH
23.4729255136
763 (in isoform 2)Phosphorylation-23.4721406692
773PhosphorylationDIRDIRNSTGSQDGP
HHHHHHHCCCCCCCC
25.0528176443
773 (in isoform 2)Phosphorylation-25.05-
774PhosphorylationIRDIRNSTGSQDGPV
HHHHHHCCCCCCCCC
44.3925159151
774 (in isoform 2)Phosphorylation-44.39-
776PhosphorylationDIRNSTGSQDGPVSN
HHHHCCCCCCCCCCC
25.7817525332
776 (in isoform 2)Phosphorylation-25.78-
782PhosphorylationGSQDGPVSNPSSSNS
CCCCCCCCCCCCCCC
46.2722199227
785PhosphorylationDGPVSNPSSSNSSQD
CCCCCCCCCCCCCCH
51.1223401153
785 (in isoform 2)Phosphorylation-51.12-
786PhosphorylationGPVSNPSSSNSSQDS
CCCCCCCCCCCCCHH
34.4928450419
787PhosphorylationPVSNPSSSNSSQDSL
CCCCCCCCCCCCHHH
45.1021955146
789PhosphorylationSNPSSSNSSQDSLHK
CCCCCCCCCCHHHHC
31.1828450419
790PhosphorylationNPSSSNSSQDSLHKA
CCCCCCCCCHHHHCC
42.1121955146
790 (in isoform 2)Phosphorylation-42.11-
793PhosphorylationSSNSSQDSLHKAPKK
CCCCCCHHHHCCCHH
25.4123401153
801AcetylationLHKAPKKKGIKSSIG
HHCCCHHHCCCHHHH
72.50130745
804AcetylationAPKKKGIKSSIGRLF
CCHHHCCCHHHHHHH
46.98130747
805PhosphorylationPKKKGIKSSIGRLFG
CHHHCCCHHHHHHHC
25.8521712546
806PhosphorylationKKKGIKSSIGRLFGK
HHHCCCHHHHHHHCC
24.8621712546
833PhosphorylationALGQAGVSETDNSSQ
HHHHCCCCCCCCCCH
33.5827251275
835PhosphorylationGQAGVSETDNSSQDA
HHCCCCCCCCCCHHH
32.7320873877
838PhosphorylationGVSETDNSSQDALGL
CCCCCCCCCHHHHCH
31.9925159151
839PhosphorylationVSETDNSSQDALGLS
CCCCCCCCHHHHCHH
38.0328985074
847UbiquitinationQDALGLSKLGGQAEK
HHHHCHHHCCCHHHH
57.08-
915PhosphorylationGAIMSALSDTEIQRE
CCHHHHCCCHHHHHH
42.05-
943PhosphorylationLAIQEIMSLTSPSAP
HHHHHHHHCCCCCCC
33.8727251275
945PhosphorylationIQEIMSLTSPSAPPT
HHHHHHCCCCCCCCC
31.1428348404
946PhosphorylationQEIMSLTSPSAPPTS
HHHHHCCCCCCCCCC
23.3527251275
948PhosphorylationIMSLTSPSAPPTSRT
HHHCCCCCCCCCCCC
53.8528348404
952PhosphorylationTSPSAPPTSRTTLAY
CCCCCCCCCCCEEEE
29.7624719451
953PhosphorylationSPSAPPTSRTTLAYG
CCCCCCCCCCEEEEC
33.1428348404
1011PhosphorylationGQLKMVDSFHRNSFQ
HHHCCHHCCCCCCHH
16.1328857561
1120SulfoxidationEFNNLLVMGTDRRFD
HHHCEEEEECCCCCC
4.8921406390
1133PhosphorylationFDEDDDKSFRRAPSW
CCCCCCHHHHCCCHH
30.8629255136
1139PhosphorylationKSFRRAPSWRKKFRP
HHHHCCCHHHHHCCH
38.2325394399
1156PhosphorylationIRGLAAGSAETLPAN
CCHHCCCCCCCCCCC
20.4329255136
1159PhosphorylationLAAGSAETLPANFRV
HCCCCCCCCCCCEEE
37.4519664994
1159 (in isoform 2)Phosphorylation-37.45-
1167PhosphorylationLPANFRVTSSMSSPS
CCCCEEEEECCCCCC
15.7222167270
1168PhosphorylationPANFRVTSSMSSPSM
CCCEEEEECCCCCCC
22.6130266825
1169PhosphorylationANFRVTSSMSSPSMQ
CCEEEEECCCCCCCC
17.2030266825
1171PhosphorylationFRVTSSMSSPSMQPK
EEEEECCCCCCCCCC
40.8330266825
1171 (in isoform 2)Phosphorylation-40.8329507054
1172PhosphorylationRVTSSMSSPSMQPKK
EEEECCCCCCCCCCE
16.6229255136
1172 (in isoform 2)Phosphorylation-16.6229507054
1174PhosphorylationTSSMSSPSMQPKKMQ
EECCCCCCCCCCEEC
31.8130266825
1174 (in isoform 2)Phosphorylation-31.8129116813
1194PhosphorylationSGTQRLDSATVRTYS
CCCCCCCCCEEEEEC
30.3628857561

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources
701TPhosphorylationKinaseCDK5Q00535
PSP

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of LIPA1_HUMAN !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of LIPA1_HUMAN !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
GIT1_HUMANGIT1physical
12629171
ERC2_HUMANERC2physical
12923177
MBIP1_HUMANMBIPphysical
16189514
GIT1_HUMANGIT1physical
12923177
GRIP2_HUMANGRIP2physical
12923177
PTPRF_HUMANPTPRFphysical
8524829
PTPRS_HUMANPTPRSphysical
8524829
NCOA2_HUMANNCOA2physical
11931740
LIPA1_HUMANPPFIA1physical
9624153
LIPA2_HUMANPPFIA2physical
9624153
LIPA1_HUMANPPFIA1physical
22072677
LIPA_CAEELsyd-2physical
22072677
MBIP1_HUMANMBIPphysical
19060904
CEP70_HUMANCEP70physical
19060904
NEMO_HUMANIKBKGphysical
22863883
F161A_HUMANFAM161Aphysical
25416956
TXLNA_HUMANTXLNAphysical
25416956
BRCA1_HUMANBRCA1physical
25184681
LIPA3_HUMANPPFIA3physical
9624153
LIPB1_HUMANPPFIBP1physical
9624153

Drug and Disease Associations
Kegg Disease
There are no disease associations of PTM sites.
OMIM Disease
There are no disease associations of PTM sites.
Kegg Drug
There are no disease associations of PTM sites.
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of LIPA1_HUMAN

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"Quantitative phosphoproteomic analysis of T cell receptor signalingreveals system-wide modulation of protein-protein interactions.";
Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K.,Rodionov V., Han D.K.;
Sci. Signal. 2:RA46-RA46(2009).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-239; SER-242; SER-244;SER-693 AND THR-1159, AND MASS SPECTROMETRY.
"Lys-N and trypsin cover complementary parts of the phosphoproteome ina refined SCX-based approach.";
Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J.,Mohammed S.;
Anal. Chem. 81:4493-4501(2009).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-668; SER-693 ANDSER-1172, AND MASS SPECTROMETRY.
"A quantitative atlas of mitotic phosphorylation.";
Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E.,Elledge S.J., Gygi S.P.;
Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-230; SER-239; SER-242;SER-244; SER-741 AND SER-745, AND MASS SPECTROMETRY.
"Combining protein-based IMAC, peptide-based IMAC, and MudPIT forefficient phosphoproteomic analysis.";
Cantin G.T., Yi W., Lu B., Park S.K., Xu T., Lee J.-D.,Yates J.R. III;
J. Proteome Res. 7:1346-1351(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-763, AND MASSSPECTROMETRY.
"ATM and ATR substrate analysis reveals extensive protein networksresponsive to DNA damage.";
Matsuoka S., Ballif B.A., Smogorzewska A., McDonald E.R. III,Hurov K.E., Luo J., Bakalarski C.E., Zhao Z., Solimini N.,Lerenthal Y., Shiloh Y., Gygi S.P., Elledge S.J.;
Science 316:1160-1166(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-776, AND MASSSPECTROMETRY.
"Global, in vivo, and site-specific phosphorylation dynamics insignaling networks.";
Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P.,Mann M.;
Cell 127:635-648(2006).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-239 AND SER-242, ANDMASS SPECTROMETRY.
"Tyrosine phosphorylated Par3 regulates epithelial tight junctionassembly promoted by EGFR signaling.";
Wang Y., Du D., Fang L., Yang G., Zhang C., Zeng R., Ullrich A.,Lottspeich F., Chen Z.;
EMBO J. 25:5058-5070(2006).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-684, AND MASSSPECTROMETRY.

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