TYW2_YEAST - dbPTM
TYW2_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID TYW2_YEAST
UniProt AC Q04235
Protein Name tRNA wybutosine-synthesizing protein 2
Gene Name TRM12
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 462
Subcellular Localization Cytoplasm .
Protein Description S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S-adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86..
Protein Sequence MSDETMPVEFLVSDKRLLKTIKVKLETNGLFVTPIYSDNDNKVIKSSIEDLNHPLAVEINNIAGVKARFHESGNLERSEGHLKHQSNSITEFTKSFLKDHGLANDKIFLSHLLDHLPLKYTIYPPVVLFNNSTVRSFNHPIWQKAFQLKLFDPNEYYRELLCFLSPGKPSKGTSLHPNNRLLTHLAINNPITEADVLRRPFNIQPLYGKLIDDSILDDNDNTLWENPSQEQLNSSIWCKVIQNGVTQIWSPVFTMFSRGNIKEKKRVLTTFPDICNNDVVDLYAGIGYFTFSYLTKGARTLFAFELNPWSVEGLKRGLKANGFNKSGNCHVFQESNEMCVQRLTEFLSQNPGFRLRIRHINLGLLPSSKQGWPLAIKLIYLQGASLEKVTMHIHENVHIDAIEDGSFEKNVIVELDAINESIALIRNRGIKLQFVRSKLERIKTFAPDIWHVCVDVDVIVST
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
144AcetylationFNHPIWQKAFQLKLF
CCCHHHHHHHHCCCC
35.8524489116

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of TYW2_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of TYW2_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of TYW2_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
TR112_YEASTTRM112physical
20826334
SGF29_YEASTSGF29genetic
27708008
RPN4_YEASTRPN4genetic
27708008
VAM7_YEASTVAM7genetic
27708008
RL8A_YEASTRPL8Agenetic
27708008
COX23_YEASTCOX23genetic
27708008
ATP10_YEASTATP10genetic
27708008
NU170_YEASTNUP170genetic
27708008
CSG2_YEASTCSG2genetic
27708008
GID4_YEASTVID24genetic
27708008
SEC66_YEASTSEC66genetic
27708008
DPH7_YEASTRRT2genetic
27708008
RV161_YEASTRVS161genetic
27708008
RIM1_YEASTRIM1genetic
27708008
TAH1_YEASTTAH1genetic
27708008
BUD31_YEASTBUD31genetic
27708008
IMG2_YEASTIMG2genetic
27708008
BRE1_YEASTBRE1genetic
27708008
ATG31_YEASTATG31genetic
27708008
TPS2_YEASTTPS2genetic
27708008
INO2_YEASTINO2genetic
27708008
PLP1_YEASTPLP1genetic
27708008
HSP78_YEASTHSP78genetic
27708008
IPK1_YEASTIPK1genetic
27708008
BCS1_YEASTBCS1genetic
27708008
RLA4_YEASTRPP2Bgenetic
27708008
SHE9_YEASTSHE9genetic
27708008
IES5_YEASTIES5genetic
27708008
GLRX4_YEASTGRX4genetic
27708008
XRN1_YEASTXRN1genetic
27708008
QCR9_YEASTQCR9genetic
27708008
RTA1_YEASTRTA1genetic
27708008
SSP1_YEASTSSP1genetic
27708008
PTH_YEASTPTH1genetic
27708008
SDHX_YEASTYJL045Wgenetic
27708008
SWE1_YEASTSWE1genetic
27708008
CYP7_YEASTCPR7genetic
27708008
DPOD3_YEASTPOL32genetic
27708008
PSR1_YEASTPSR1genetic
27708008
COX12_YEASTCOX12genetic
27708008
ECM19_YEASTECM19genetic
27708008
COX7_YEASTCOX7genetic
27708008
MAS5_YEASTYDJ1genetic
27708008
EOS1_YEASTEOS1genetic
27708008
SWS2_YEASTSWS2genetic
27708008
FAR11_YEASTFAR11genetic
27708008
COQ2_YEASTCOQ2genetic
27708008
BRE5_YEASTBRE5genetic
27708008
IZH2_YEASTIZH2genetic
27708008
COQ10_YEASTCOQ10genetic
27708008
ROD1_YEASTROD1genetic
27708008
CY1_YEASTCYT1genetic
27708008
KIN4_YEASTKIN4genetic
27708008
YAR1_YEASTYAR1genetic
27708008
VPS4_YEASTVPS4genetic
27708008

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of TYW2_YEAST

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Related Literatures of Post-Translational Modification

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