TCD1_YEAST - dbPTM
TCD1_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID TCD1_YEAST
UniProt AC P38756
Protein Name tRNA threonylcarbamoyladenosine dehydratase 1
Gene Name TCD1
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 429
Subcellular Localization Mitochondrion outer membrane
Multi-pass membrane protein .
Protein Description Catalyzes the ATP-dependent dehydration of threonylcarbamoyladenosine at position 37 (t(6)A37) to form cyclic t(6)A37 (ct(6)A37) in tRNAs that read codons beginning with adenine..
Protein Sequence MANNTWKLIATTALISVFSTQLAKSVWKEYKLSCAANKNKTVSRPRQYDDHLFREQLARNYAFLGEEGMRKIKEQYIVIVGAGEVGSWVCTMLIRSGCQKIMIIDPENISIDSLNTHCCAVLSDIGKPKVQCLKEHLSKIAPWSEIKARAKAWTKENSHDLIFADGESPTFIVDCLDNLESKVDLLEYAHHNKIDVISSMGVATKSDPTRVSINDISMTEFDPISRCVRRKLRKRGIATGISVVFSNEMLDPRRDDILSPIDCEHRAINAVRDEALRHLPELGTMPGIFGLSIATWILTKVSGYPMKENEVKNRLKFYDSILETFQKQMARLNENKERSSLLGLEEVGYIVEEMFRGKSPISGYSTKLALTKWEANKEISLTNVVLMTKEEQEIHEKRILLDGEKLTAVYSEEVLDFIERLFKEEEYYS
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
7Ubiquitination-MANNTWKLIATTAL
-CCCCHHHHHHHHHH
17644757
24UbiquitinationVFSTQLAKSVWKEYK
HHHHHHHHHHHHHHH
17644757
147AcetylationIAPWSEIKARAKAWT
HCCHHHHHHHHHHHC
24489116
259PhosphorylationPRRDDILSPIDCEHR
CCCCCCCCCCCCCHH
17330950
307UbiquitinationKVSGYPMKENEVKNR
HHCCCCCCHHHHHHH
23749301
359PhosphorylationEEMFRGKSPISGYST
HHHHCCCCCCCCCHH
26447709
362PhosphorylationFRGKSPISGYSTKLA
HCCCCCCCCCHHHHE
26447709
364PhosphorylationGKSPISGYSTKLALT
CCCCCCCCHHHHEEH
26447709
423UbiquitinationDFIERLFKEEEYYS-
HHHHHHHCHHHHCC-
23749301

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of TCD1_YEAST !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of TCD1_YEAST !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of TCD1_YEAST !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
ALO_YEASTALO1physical
18467557
GST1_YEASTGTT1physical
18467557
UIP4_YEASTUIP4physical
18467557
VPS52_YEASTVPS52genetic
19325107
GET2_YEASTGET2genetic
27708008
ABM1_YEASTABM1genetic
27708008
LST4_YEASTLST4genetic
27708008
SKG1_YEASTSKG1genetic
27708008
INO4_YEASTINO4genetic
27708008
SNT1_YEASTSNT1genetic
27708008
DOT1_YEASTDOT1genetic
27708008
VPS60_YEASTVPS60genetic
27708008
PSP1_YEASTPSP1genetic
27708008
ACA1_YEASTACA1genetic
27708008
CAJ1_YEASTCAJ1genetic
27708008
AK_YEASTHOM3genetic
27708008
SPI1_YEASTSPI1genetic
27708008
BEM2_YEASTBEM2genetic
27708008
SPT2_YEASTSPT2genetic
27708008
BUD27_YEASTBUD27genetic
27708008
MIC19_YEASTMIC19genetic
27708008
AROC_YEASTARO2genetic
27708008
CTU1_YEASTNCS6genetic
27708008
MOG1_YEASTMOG1genetic
27708008
YKJ1_YEASTYKL091Cgenetic
27708008
DCOR_YEASTSPE1genetic
27708008
SET3_YEASTSET3genetic
27708008
GMH1_YEASTGMH1genetic
27708008
CAF4_YEASTCAF4genetic
27708008
SRL3_YEASTSRL3genetic
27708008
PTR2_YEASTPTR2genetic
27708008
ENT4_YEASTENT4genetic
27708008
RL8B_YEASTRPL8Bgenetic
27708008
VRP1_YEASTVRP1genetic
27708008
ELP1_YEASTIKI3genetic
27708008
SUB1_YEASTSUB1genetic
27708008
MOT3_YEASTMOT3genetic
27708008
NGL2_YEASTNGL2genetic
27708008
ELP6_YEASTELP6genetic
27708008
CTU2_YEASTNCS2genetic
27708008
LEO1_YEASTLEO1genetic
27708008
ELP3_YEASTELP3genetic
27708008
ELP4_YEASTELP4genetic
27708008
CHMU_YEASTARO7genetic
27708008
KAP0_HUMANPRKAR1Aphysical
27107014

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of TCD1_YEAST

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Related Literatures of Post-Translational Modification

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