LDB17_YEAST - dbPTM
LDB17_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID LDB17_YEAST
UniProt AC Q12342
Protein Name Protein LDB17
Gene Name LDB17
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 491
Subcellular Localization Cytoplasm . Bud . Bud neck .
Protein Description May be involved in protein-linked oligosaccharide phosphorylation since the deletion reduces the negative charge of the cell surface..
Protein Sequence MILDPLSPNIENHTQDEIIEFWEKTESIANIPKENLDESHVNSSLVAYLKFATDSYKVFINTDRDLYRMSLILLESSLFEFKKEFCLSKLQSLLNIDLLEMNMKFIIVYILLCEAKKNVYSLEIMLKFQGFTVFYNTLYTQFAYLSKYGKERTVASKHQYNSNNSSTGTSLDSLDRSLTDIDLGIIDEMKQISTVLMDLLFQIMKYCKCVIANLQIVDDFFVYYMMESMRSDTMDDMFNNAEFKLLLALNEQYMMFAKEYDIENKVYKYLINGSVSRCFTELLLLKFNRASDPPLQIMMCKIIYLILTPRGDYSPMNFFYTNDLRVLIDVLIRELQNISEDEEVLRNTLLRVLIPLLKNTQLSKTHYRKDDLNKLLNYLSTLDNICVDSPALHEHQVTVALSRKCLQQIPWLETPSTPSDGGSSVSSNNTSRNSSIVALGTPDNQNILARKGHLYSNRELDVSAESLTKRKAKAPPPPPPPPPSRKCGTPK
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure		 ASA (%) Reference Orthologous
Protein Cluster
7Phosphorylation-MILDPLSPNIENHT
-CCCCCCCCCCCCCC		22.6821440633
434PhosphorylationSNNTSRNSSIVALGT
CCCCCCCCEEEEECC		21.9719779198
435PhosphorylationNNTSRNSSIVALGTP
CCCCCCCEEEEECCC		25.3225752575
441PhosphorylationSSIVALGTPDNQNIL
CEEEEECCCCCCCCH		28.4629688323
455PhosphorylationLARKGHLYSNRELDV
HHHCCCCCCCCCCCC		9.7519823750
456PhosphorylationARKGHLYSNRELDVS
HHCCCCCCCCCCCCC		35.4519823750
463PhosphorylationSNRELDVSAESLTKR
CCCCCCCCHHHHHCC		26.4522369663
466PhosphorylationELDVSAESLTKRKAK
CCCCCHHHHHCCCCC		40.8422369663
468PhosphorylationDVSAESLTKRKAKAP
CCCHHHHHCCCCCCC		37.7722890988
Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of LDB17_YEAST !!
Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of LDB17_YEAST !!
Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10) 		Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of LDB17_YEAST !!
Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
YKH0_YEASTYKL070Wphysical
10688190
SEC4_YEASTSEC4genetic
23897890
PROF_YEASTPFY1genetic
27708008
VPS29_YEASTVPS29genetic
27708008
VRP1_YEASTVRP1genetic
27708008
CND2_YEASTBRN1genetic
27708008
ARPC1_YEASTARC40genetic
27708008
CDC10_YEASTCDC10genetic
27708008
CDC37_YEASTCDC37genetic
27708008
BCP1_YEASTBCP1genetic
27708008
RSP5_YEASTRSP5genetic
27708008
CDC4_YEASTCDC4genetic
27708008
ACT_YEASTACT1genetic
27708008
MED6_YEASTMED6genetic
27708008
RPF1_YEASTRPF1genetic
27708008
CDC12_YEASTCDC12genetic
27708008
ATC7_YEASTNEO1genetic
27708008
KRE9_YEASTKRE9genetic
27708008
CDC11_YEASTCDC11genetic
27708008
BOS1_YEASTBOS1genetic
27708008
TAD3_YEASTTAD3genetic
27708008
SEC39_YEASTSEC39genetic
27708008
ROT1_YEASTROT1genetic
27708008
DED1_YEASTDED1genetic
27708008
KRE5_YEASTKRE5genetic
27708008
SEC62_YEASTSEC62genetic
27708008
PSB5_YEASTPRE2genetic
27708008
ATC3_YEASTDRS2genetic
27708008
SEF1_YEASTSEF1genetic
27708008
PER1_YEASTPER1genetic
27708008
RIM15_YEASTRIM15genetic
27708008
PDK2_YEASTPKP2genetic
27708008
ATC1_YEASTPMR1genetic
27708008
HUR1_YEASTHUR1genetic
27708008
VMA21_YEASTVMA21genetic
27708008
TBP7_YEASTYTA7genetic
27708008
SLT2_YEASTSLT2genetic
27708008
STB5_YEASTSTB5genetic
27708008
BCK1_YEASTBCK1genetic
27708008
HOC1_YEASTHOC1genetic
27708008
YKE44_YEASTYKL044Wgenetic
27708008
DCOR_YEASTSPE1genetic
27708008
ACE2_YEASTACE2genetic
27708008
SWI6_YEASTSWI6genetic
27708008
CHS5_YEASTCHS5genetic
27708008
SST2_YEASTSST2genetic
27708008
RS3A2_YEASTRPS1Bgenetic
27708008
PFD4_YEASTGIM3genetic
27708008
NEW1_YEASTNEW1genetic
27708008
CACO2_HUMANCALCOCO2physical
27107014
Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of LDB17_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-7; SER-435; SER-463 ANDSER-466, AND MASS SPECTROMETRY.
"Large-scale phosphorylation analysis of alpha-factor-arrestedSaccharomyces cerevisiae.";
Li X., Gerber S.A., Rudner A.D., Beausoleil S.A., Haas W., Villen J.,Elias J.E., Gygi S.P.;
J. Proteome Res. 6:1190-1197(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-463 AND SER-466, ANDMASS SPECTROMETRY.

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