CDN1B_HUMAN - dbPTM
CDN1B_HUMAN - PTM Information in dbPTM
Basic Information of Protein
UniProt ID CDN1B_HUMAN
UniProt AC P46527
Protein Name Cyclin-dependent kinase inhibitor 1B
Gene Name CDKN1B
Organism Homo sapiens (Human).
Sequence Length 198
Subcellular Localization Nucleus. Cytoplasm. Endosome. Nuclear and cytoplasmic in quiescent cells. AKT- or RSK-mediated phosphorylation on Thr-198, binds 14-3-3, translocates to the cytoplasm and promotes cell cycle progression. Mitogen-activated UHMK1 phosphorylation on Ser
Protein Description Important regulator of cell cycle progression. Inhibits the kinase activity of CDK2 bound to cyclin A, but has little inhibitory activity on CDK2 bound to SPDYA. [PubMed: 28666995 Involved in G1 arrest. Potent inhibitor of cyclin E- and cyclin A-CDK2 complexes. Forms a complex with cyclin type D-CDK4 complexes and is involved in the assembly, stability, and modulation of CCND1-CDK4 complex activation. Acts either as an inhibitor or an activator of cyclin type D-CDK4 complexes depending on its phosphorylation state and/or stoichometry.]
Protein Sequence MSNVRVSNGSPSLERMDARQAEHPKPSACRNLFGPVDHEELTRDLEKHCRDMEEASQRKWNFDFQNHKPLEGKYEWQEVEKGSLPEFYYRPPRPPKGACKVPAQESQDVSGSRPAAPLIGAPANSEDTHLVDPKTDPSDSQTGLAEQCAGIRKRPATDDSSTQNKRANRTEENVSDGSPNAGSVEQTPKKPGLRRRQT
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
2O-linked_Glycosylation------MSNVRVSNG
------CCCCCCCCC
43.99111190599
2Phosphorylation------MSNVRVSNG
------CCCCCCCCC
43.9923403867
7Phosphorylation-MSNVRVSNGSPSLE
-CCCCCCCCCCCCHH
25.5530266825
10PhosphorylationNVRVSNGSPSLERMD
CCCCCCCCCCHHHHH
18.6329255136
12PhosphorylationRVSNGSPSLERMDAR
CCCCCCCCHHHHHHH
44.5530266825
15MethylationNGSPSLERMDARQAE
CCCCCHHHHHHHHCC
33.3124151417
25UbiquitinationARQAEHPKPSACRNL
HHHCCCCCCHHHHHH
54.21-
68UbiquitinationNFDFQNHKPLEGKYE
CCCCCCCCCCCCCCE
59.87-
74PhosphorylationHKPLEGKYEWQEVEK
CCCCCCCCEEEEEHH
33.0019204084
81AcetylationYEWQEVEKGSLPEFY
CEEEEEHHCCCCCEE
60.007959773
81UbiquitinationYEWQEVEKGSLPEFY
CEEEEEHHCCCCCEE
60.00-
83PhosphorylationWQEVEKGSLPEFYYR
EEEEHHCCCCCEECC
52.3915034923
88PhosphorylationKGSLPEFYYRPPRPP
HCCCCCEECCCCCCC
9.2619204084
89PhosphorylationGSLPEFYYRPPRPPK
CCCCCEECCCCCCCC
23.2018454177
100AcetylationRPPKGACKVPAQESQ
CCCCCCCCCCCCCCC
51.2022547391
106PhosphorylationCKVPAQESQDVSGSR
CCCCCCCCCCCCCCC
21.4326437602
106O-linked_GlycosylationCKVPAQESQDVSGSR
CCCCCCCCCCCCCCC
21.43144407
110PhosphorylationAQESQDVSGSRPAAP
CCCCCCCCCCCCCCC
39.0628348404
110O-linked_GlycosylationAQESQDVSGSRPAAP
CCCCCCCCCCCCCCC
39.06111190603
112PhosphorylationESQDVSGSRPAAPLI
CCCCCCCCCCCCCCC
27.8228348404
134UbiquitinationDTHLVDPKTDPSDSQ
CCCCCCCCCCCCCCC
62.1810318797
135PhosphorylationTHLVDPKTDPSDSQT
CCCCCCCCCCCCCCC
59.5427251275
138PhosphorylationVDPKTDPSDSQTGLA
CCCCCCCCCCCCCHH
53.3427251275
140PhosphorylationPKTDPSDSQTGLAEQ
CCCCCCCCCCCHHHH
33.7023401153
142PhosphorylationTDPSDSQTGLAEQCA
CCCCCCCCCHHHHHH
37.8127251275
153UbiquitinationEQCAGIRKRPATDDS
HHHHCCCCCCCCCCC
61.8910318797
154MethylationQCAGIRKRPATDDSS
HHHCCCCCCCCCCCC
19.0830762713
154DimethylationQCAGIRKRPATDDSS
HHHCCCCCCCCCCCC
19.08-
157O-linked_GlycosylationGIRKRPATDDSSTQN
CCCCCCCCCCCCHHC
42.9210137
157PhosphorylationGIRKRPATDDSSTQN
CCCCCCCCCCCCHHC
42.9215280662
165UbiquitinationDDSSTQNKRANRTEE
CCCCHHCHHHCCCCC
42.9722053931
170PhosphorylationQNKRANRTEENVSDG
HCHHHCCCCCCCCCC
47.6723403867
175PhosphorylationNRTEENVSDGSPNAG
CCCCCCCCCCCCCCC
48.0825849741
178PhosphorylationEENVSDGSPNAGSVE
CCCCCCCCCCCCCCC
21.7023401153
183PhosphorylationDGSPNAGSVEQTPKK
CCCCCCCCCCCCCCC
21.7723403867
187PhosphorylationNAGSVEQTPKKPGLR
CCCCCCCCCCCCCCC
24.4610931950
198O-linked_GlycosylationPGLRRRQT-------
CCCCCCCC-------
38.4717177
198PhosphorylationPGLRRRQT-------
CCCCCCCC-------
38.4715280662

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources
10SPhosphorylationKinaseKISQ8TAS1
PSP
10SPhosphorylationKinaseRPS6KA3P18654
GPS
10SPhosphorylationKinaseRPS6KA1Q63531
GPS
10SPhosphorylationKinaseMAPK1P28482
GPS
10SPhosphorylationKinaseCAMK2AQ9UQM7
PSP
10SPhosphorylationKinaseHIPK2Q9H2X6
PSP
10SPhosphorylationKinaseCDK6Q00534
PSP
10SPhosphorylationKinaseCDK16Q00536
PSP
10SPhosphorylationKinaseAKT-FAMILY-GPS
10SPhosphorylationKinasePKB_GROUP-PhosphoELM
10SPhosphorylationKinaseAKT1P31749
PSP
74YPhosphorylationKinaseYES1P07947
GPS
74YPhosphorylationKinaseSRC64-PhosphoELM
74YPhosphorylationKinaseSRCP12931
Uniprot
83SPhosphorylationKinaseCSNK2B-GPS
83SPhosphorylationKinaseCSNK2A1P68400
GPS
88YPhosphorylationKinaseJAK2O60674
Uniprot
88YPhosphorylationKinaseSRC64-PhosphoELM
88YPhosphorylationKinaseLYNP07948
Uniprot
88YPhosphorylationKinaseLYNP25911
PSP
88YPhosphorylationKinaseABL1P00519
GPS
88YPhosphorylationKinaseABLP00520
PSP
88YPhosphorylationKinaseSRCP12931
Uniprot
88YPhosphorylationKinaseYES1P07947
GPS
88YPhosphorylationKinaseABL-FAMILY-GPS
89YPhosphorylationKinaseSRCP12931
PSP
89YPhosphorylationKinaseSRC64-PhosphoELM
89YPhosphorylationKinaseYES1P07947
GPS
89YPhosphorylationKinaseABL1P00519
GPS
140SPhosphorylationKinaseATMQ13315
PSP
140SPhosphorylationKinasePRKDCP78527
GPS
157TPhosphorylationKinaseAKT-FAMILY-GPS
157TPhosphorylationKinasePIM1P11309
Uniprot
157TPhosphorylationKinaseSGK1O00141
PSP
157TPhosphorylationKinaseAKT1P31749
Uniprot
157TPhosphorylationKinasePKB_GROUP-PhosphoELM
157TPhosphorylationKinaseCAMK1AQ14012
PSP
178SPhosphorylationKinaseMAPK1P28482
GPS
187TPhosphorylationKinaseAKT1P31749
Uniprot
187TPhosphorylationKinaseCDK1P06493
Uniprot
187TPhosphorylationKinaseCDK2P24941
Uniprot
187TPhosphorylationKinaseCDK2P97377
PSP
187TPhosphorylationKinaseCDK6Q00534
PSP
187TPhosphorylationKinaseMAPK3P27361
GPS
187TPhosphorylationKinaseABLP00519
PSP
187TPhosphorylationKinaseMAPK1P28482
GPS
198TPhosphorylationKinaseRSK_GROUP-PhosphoELM
198TPhosphorylationKinaseRPS6KA3P18654
GPS
198TPhosphorylationKinaseRSK-SUBFAMILY-GPS
198TPhosphorylationKinasePRKAA1Q13131
GPS
198TPhosphorylationKinaseAKT1P31749
Uniprot
198TPhosphorylationKinaseCAMK1AQ14012
PSP
198TPhosphorylationKinaseRPS6KA1Q15418
Uniprot
198TPhosphorylationKinaseSGK1O00141
PSP
198TPhosphorylationKinasePIM1P11309
Uniprot
198TPhosphorylationKinaseRPS6KA1Q63531
GPS
198TPhosphorylationKinaseKS6A3P51812
PhosphoELM
-KUbiquitinationE3 ubiquitin ligaseCDC34P49427
PMID:19123975
-KUbiquitinationE3 ubiquitin ligaseUBE3AQ05086
PMID:19591933
-KUbiquitinationE3 ubiquitin ligaseCOP1Q8NHY2
PMID:26254224
-KUbiquitinationE3 ubiquitin ligaseSKP2Q13309
PMID:10375532
-KUbiquitinationE3 ubiquitin ligaseRCHY1Q96PM5
PMID:18006823
-KUbiquitinationE3 ubiquitin ligaseCDC20Q12834
PMID:22199232
-KUbiquitinationE3 ubiquitin ligaseTRIM21P19474
PMID:10323868
-KUbiquitinationE3 ubiquitin ligaseRNF123Q5XPI4
PMID:15531880
-KUbiquitinationE3 ubiquitin ligaseSIAH2O43255
PMID:21734459
-KUbiquitinationE3 ubiquitin ligaseSAGP10523
PMID:23136067
-KUbiquitinationE3 ubiquitin ligaseWWP1Q9H0M0
PMID:21795702

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference
10SPhosphorylation

10831586
187TPhosphorylation

10323868
187TPhosphorylation

10323868
187Tubiquitylation

10323868
198TPhosphorylation

12042314

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of CDN1B_HUMAN !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
NUP50_HUMANNUP50physical
10891500
TRAF2_HUMANTRAF2physical
16189514
SPDYA_HUMANSPDYAphysical
12972555
UCHL1_HUMANUCHL1physical
12082530
CDK6_HUMANCDK6physical
11360184
CCND3_HUMANCCND3physical
11360184
CDK4_HUMANCDK4physical
11360184
CCND1_HUMANCCND1physical
11360184
CCND3_HUMANCCND3physical
10342870
XPO1_HUMANXPO1physical
11889117
SKP2_HUMANSKP2physical
12042314
AKT1_HUMANAKT1physical
12042314
1433T_HUMANYWHAQphysical
12042314
GRB2_HUMANGRB2physical
11278754
XPO1_HUMANXPO1physical
12529437
CCNE1_HUMANCCNE1physical
12529437
CDK2_HUMANCDK2physical
12529437
CUL4A_HUMANCUL4Aphysical
19056892
CCNA1_HUMANCCNA1physical
16774918
CSN5_HUMANCOPS5physical
16951171
SKP2_HUMANSKP2physical
15735731
UBAC1_HUMANUBAC1physical
15531880
RN123_HUMANRNF123physical
15531880
SKP2_HUMANSKP2physical
15469821
CCND3_HUMANCCND3physical
10597239
DDB1_HUMANDDB1physical
21237244
SKP2_HUMANSKP2physical
21237244
UBE3A_HUMANUBE3Aphysical
19591933
PIN1_HUMANPIN1physical
19584057
CKS1_HUMANCKS1Bphysical
19584057
PIN1_MOUSEPin1physical
19584057
IMA3_HUMANKPNA4physical
15057270
IMA5_HUMANKPNA1physical
15057270
1433E_HUMANYWHAEphysical
15057270
KAT2B_HUMANKAT2Bphysical
22547391
H15_HUMANHIST1H1Bphysical
17671428
CDK2_HUMANCDK2physical
12800980
CCNA2_HUMANCCNA2physical
9724724
CDK2_HUMANCDK2physical
9724724
CCNE1_HUMANCCNE1physical
8891332
JAK2_HUMANJAK2physical
21423214
CDK4_HUMANCDK4physical
8978686
CDK2_HUMANCDK2physical
8978686
CCND1_HUMANCCND1physical
9311993
CCNA2_HUMANCCNA2physical
9311993
CCNE1_HUMANCCNE1physical
9311993
CDK2_HUMANCDK2physical
9311993
CDK4_HUMANCDK4physical
9311993
CUL4A_HUMANCUL4Aphysical
16467204
SKP2_HUMANSKP2physical
20160482
SKP2_HUMANSKP2physical
15355997
CDK2_HUMANCDK2physical
15355997
TSC1_HUMANTSC1physical
15355997
TSC2_HUMANTSC2physical
15355997
SKP2_HUMANSKP2physical
10559916
SKP1_HUMANSKP1physical
10559916
CUL1_HUMANCUL1physical
10559916
ZN363_HUMANRCHY1physical
21236467
CDK2_HUMANCDK2physical
11940657
H11_HUMANHIST1H1Aphysical
11940657
CCND1_HUMANCCND1physical
11940657
CDK4_HUMANCDK4physical
11940657
CCNE1_HUMANCCNE1physical
11940657
CSN5_HUMANCOPS5physical
15480426
CSN5_HUMANCOPS5physical
18285702
CDK2_HUMANCDK2physical
18285702
CDK4_HUMANCDK4physical
18285702
CCND3_HUMANCCND3physical
16782892
CDK4_HUMANCDK4physical
16782892
CDK6_HUMANCDK6physical
16782892
CDK2_HUMANCDK2physical
16782892
MK08_HUMANMAPK8physical
12963725
MK10_HUMANMAPK10physical
12963725
CCNE1_HUMANCCNE1physical
17254967
CDK2_HUMANCDK2physical
17254967
SRC_HUMANSRCphysical
17254967
SKP2_HUMANSKP2physical
18239684
CDK2_HUMANCDK2physical
9660939
IMA7_HUMANKPNA6physical
22770219
CCNE2_HUMANCCNE2physical
9840943
CDK5_HUMANCDK5physical
15890360
CDK2_HUMANCDK2physical
15890360
KS6A1_HUMANRPS6KA1physical
19470470
RHOA_HUMANRHOAphysical
19470470
CDK4_HUMANCDK4physical
16326706
CDK2_HUMANCDK2physical
16326706
CDK2_HUMANCDK2physical
17053782
CDK4_HUMANCDK4physical
17053782
CCND3_HUMANCCND3physical
23718855
LYN_HUMANLYNphysical
17254966
CDK2_HUMANCDK2physical
17254966
CCNA2_HUMANCCNA2physical
17254966
1433T_HUMANYWHAQphysical
17470459
TSC2_HUMANTSC2physical
17470459
IRF1_HUMANIRF1physical
21988832
PSB1_HUMANPSMB1physical
23725357
CSN5_HUMANCOPS5physical
18202760
TXNIP_HUMANTXNIPphysical
18202760
CSN5_HUMANCOPS5physical
24671224
SKP2_HUMANSKP2physical
21503567
RFWD2_HUMANRFWD2physical
26254224
SKP2_HUMANSKP2physical
26450989
CDK2_HUMANCDK2physical
26450989
MYC_HUMANMYCphysical
26701207
HSP7C_HUMANHSPA8physical
26775844
XPO1_HUMANXPO1physical
27175940
CCNE1_HUMANCCNE1physical
27175940
CDK2_HUMANCDK2physical
27175940
CDK6_HUMANCDK6physical
21439954
CDK4_HUMANCDK4physical
21439954
CDK2_HUMANCDK2physical
21439954
RHOA_HUMANRHOAphysical
23333463
VHL_HUMANVHLgenetic
28319113
IGF1R_HUMANIGF1Rgenetic
28319113
SIR6_HUMANSIRT6physical
27794562
GNL3_HUMANGNL3physical
27998760
CSN5_HUMANCOPS5physical
28919423
AKT1_HUMANAKT1physical
28919423

Drug and Disease Associations
Kegg Disease
There are no disease associations of PTM sites.
OMIM Disease
610755Multiple endocrine neoplasia 4 (MEN4)
Kegg Drug
There are no disease associations of PTM sites.
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of CDN1B_HUMAN

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"ATM and ATR substrate analysis reveals extensive protein networksresponsive to DNA damage.";
Matsuoka S., Ballif B.A., Smogorzewska A., McDonald E.R. III,Hurov K.E., Luo J., Bakalarski C.E., Zhao Z., Solimini N.,Lerenthal Y., Shiloh Y., Gygi S.P., Elledge S.J.;
Science 316:1160-1166(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-140, AND MASSSPECTROMETRY.
"Large-scale characterization of HeLa cell nuclear phosphoproteins.";
Beausoleil S.A., Jedrychowski M., Schwartz D., Elias J.E., Villen J.,Li J., Cohn M.A., Cantley L.C., Gygi S.P.;
Proc. Natl. Acad. Sci. U.S.A. 101:12130-12135(2004).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-10, AND MASSSPECTROMETRY.
"Phosphorylation of p27Kip1 at threonine 198 by p90 ribosomal proteinS6 kinases promotes its binding to 14-3-3 and cytoplasmiclocalization.";
Fujita N., Sato S., Tsuruo T.;
J. Biol. Chem. 278:49254-49260(2003).
Cited for: PHOSPHORYLATION AT SER-10 AND THR-198, INTERACTION WITH YWHAE; YWHAH;SFN; YWHAQ; RPS6KA1 AND RPS6KA3, SUBCELLULAR LOCATION, AND MUTAGENESISOF THR-157 AND THR-198.
"Akt-dependent phosphorylation of p27Kip1 promotes binding to 14-3-3and cytoplasmic localization.";
Fujita N., Sato S., Katayama K., Tsuruo T.;
J. Biol. Chem. 277:28706-28713(2002).
Cited for: PHOSPHORYLATION AT SER-10; THR-187 AND THR-198, INTERACTION WITH AKT1AND YWHAQ, SUBCELLULAR LOCATION, AND MUTAGENESIS OF SER-10; THR-157;THR-187 AND THR-198.
"A growth factor-dependent nuclear kinase phosphorylates p27(Kip1) andregulates cell cycle progression.";
Boehm M., Yoshimoto T., Crook M.F., Nallamshetty S., True A.,Nabel G.J., Nabel E.G.;
EMBO J. 21:3390-3401(2002).
Cited for: INTERACTION WITH UHMK1, PHOSPHORYLATION AT SER-10, SUBCELLULARLOCATION, AND MUTAGENESIS OF SER-10 AND THR-187.
"Phosphorylation at serine 10, a major phosphorylation site ofp27(Kip1), increases its protein stability.";
Ishida N., Kitagawa M., Hatakeyama S., Nakayama K.;
J. Biol. Chem. 275:25146-25154(2000).
Cited for: PHOSPHORYLATION AT SER-10, AND FUNCTION.
"Structural basis of the Cks1-dependent recognition of p27(Kip1) bythe SCF(Skp2) ubiquitin ligase.";
Hao B., Zheng N., Schulman B.A., Wu G., Miller J.J., Pagano M.,Pavletich N.P.;
Mol. Cell 20:9-19(2005).
Cited for: X-RAY CRYSTALLOGRAPHY (2.3 ANGSTROMS) OF 181-190 IN COMPLEX WITH SKP1;SKP2 AND CKS1B, PHOSPHORYLATION AT THR-187, MUTAGENESIS OF GLU-185 ANDTHR-187, AND UBIQUITINATION.
"Pim kinases promote cell cycle progression by phosphorylating anddown-regulating p27Kip1 at the transcriptional and posttranscriptionallevels.";
Morishita D., Katayama R., Sekimizu K., Tsuruo T., Fujita N.;
Cancer Res. 68:5076-5085(2008).
Cited for: INTERACTION WITH PIM1, AND PHOSPHORYLATION AT THR-157 AND THR-198.
"Akt-dependent T198 phosphorylation of cyclin-dependent kinaseinhibitor p27kip1 in breast cancer.";
Motti M.L., De Marco C., Califano D., Fusco A., Viglietto G.;
Cell Cycle 3:1074-1080(2004).
Cited for: PHOSPHORYLATION AT THR-198, SUBCELLULAR LOCATION, AND MUTAGENESIS OFSER-10; THR-157; THR-187 AND THR-198.
"PKB/Akt mediates cell-cycle progression by phosphorylation ofp27(Kip1) at threonine 157 and modulation of its cellularlocalization.";
Shin I., Yakes F.M., Rojo F., Shin N.-Y., Bakin A.V., Baselga J.,Arteaga C.L.;
Nat. Med. 8:1145-1152(2002).
Cited for: PHOSPHORYLATION AT THR-157, INTERACTION WITH AKT1, SUBCELLULARLOCATION, FUNCTION, AND MUTAGENESIS OF THR-157; SER-161 AND THR-162.
"Cytoplasmic relocalization and inhibition of the cyclin-dependentkinase inhibitor p27(Kip1) by PKB/Akt-mediated phosphorylation inbreast cancer.";
Viglietto G., Motti M.L., Bruni P., Melillo R.M., D'Alessio A.,Califano D., Vinci F., Chiappetta G., Tsichlis P., Bellacosa A.,Fusco A., Santoro M.;
Nat. Med. 8:1136-1144(2002).
Cited for: PHOSPHORYLATION AT THR-157, SUBCELLULAR LOCATION, ASSOCIATION WITHBREAST CANCER, AND MUTAGENESIS OF THR-157.
"Cdk-inhibitory activity and stability of p27Kip1 are directlyregulated by oncogenic tyrosine kinases.";
Grimmler M., Wang Y., Mund T., Cilensek Z., Keidel E.-M.,Waddell M.B., Jaekel H., Kullmann M., Kriwacki R.W., Hengst L.;
Cell 128:269-280(2007).
Cited for: STRUCTURE BY NMR OF 22-104, PHOSPHORYLATION AT TYR-88, FUNCTION,INDUCTION, INTERACTION WITH LYN, MASS SPECTROMETRY, AND MUTAGENESIS OFTYR-88 AND TYR-89.
"Tyrosine phosphorylation modulates binding preference to cyclin-dependent kinases and subcellular localization of p27Kip1 in the acutepromyelocytic leukemia cell line NB4.";
Kardinal C., Dangers M., Kardinal A., Koch A., Brandt D.T., Tamura T.,Welte K.;
Blood 107:1133-1140(2006).
Cited for: PHOSPHORYLATION AT TYR-88 AND TYR-89, DEPHOSPHORYLATION, INTERACTIONWITH GRB2; CDK2 AND CDK4, SUBCELLULAR LOCATION, AND MUTAGENESIS OFTYR-74; TYR-88 AND TYR-89.

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