SWI3C_ARATH - PTM Information in dbPTM

Basic Information of Protein

• UniProt ID: SWI3C_ARATH
• UniProt AC: Q9XI07
• Protein Name: SWI/SNF complex subunit SWI3C
• Gene Name: SWI3C
• Organism: Arabidopsis thaliana (Mouse-ear cress).
• Sequence Length: 807
• Subcellular Localization: Nucleus .
• Protein Description: Component of a multiprotein complex equivalent of the SWI/SNF complex, an ATP-dependent chromatin-remodeling complex, which is required for the positive and negative regulation of gene expression of a large number of genes. It changes chromatin structure by altering DNA-histone contacts within a nucleosome, leading eventually to a change in nucleosome position, thus facilitating or repressing binding of gene-specific transcription factors..
• Protein Sequence: MPASEDRRGKWKRKKRGGLSAARKPKQEEEDMEEEDEENNNNNNEEMDDVENADELQQNGGATPDPGLGIGEVVEDSGSRISDFPAVVKRVVIRPHASVMAVVAAERAGLIGETRGQGSLPALENISFGQLQALSTVPADSLDLERSDGSSSAYVISPPPIMDGEGVVKRFGDLVHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLTISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNVPSAALTSIDSLIKFDKPNCRHKGGEVYSSLPSLDGDSPDLDIRIREHLCDSHCNHCSRPLPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVEVSGVTNTENPTNGYDHKGTDSNGDLPGYSEQGSDTEIKLPFVKSPNPVMALVAFLASAVGPRVAASCAHESLSVLSEDDRMKSEGMQGKEASLLDGENQQQDGAHKTSSQNGAEAQTPLPQDKVMAAFRAGLSAAATKAKLFADHEEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQRFSAERARMLSARFGSPGGISPQTNNLQGMSLSTGGNNINSLMHQQHQQQQASATSQPSIIPGFSNNPQVQAQMHFMARQQQQQQQQQQQQQQAFSFGPRLPLNAIQTNAGSTASPNVMFGNNQLNNPAAAGAASINQPSFSHPMVRSSTGSGSGSGLGLN

Overview of Protein Modification Sites with Functional and Structural Information

Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations	Modification	Substrate Peptides & Secondary Structure	ASA (%)	Reference
320	Phosphorylation	HKGGEVYSSLPSLDG CCCCCEECCCCCCCC	30.49	30407730
321	Phosphorylation	KGGEVYSSLPSLDGD CCCCEECCCCCCCCC	26.98	30407730
324	Phosphorylation	EVYSSLPSLDGDSPD CEECCCCCCCCCCCC	44.37	30407730
329	Phosphorylation	LPSLDGDSPDLDIRI CCCCCCCCCCCCHHH	26.33	30407730
474	Phosphorylation	NGYDHKGTDSNGDLP CCCCCCCCCCCCCCC	40.85	25561503
476	Phosphorylation	YDHKGTDSNGDLPGY CCCCCCCCCCCCCCC	42.42	25561503
798	Phosphorylation	MVRSSTGSGSGSGLG CEECCCCCCCCCCCC	29.85	25561503
800	Phosphorylation	RSSTGSGSGSGLGLN ECCCCCCCCCCCCCC	31.33	25561503
802	Phosphorylation	STGSGSGSGLGLN-- CCCCCCCCCCCCC--	32.32	25561503

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)

Oops, there are no upstream regulatory protein records of SWI3C_ARATH !!

Functions of PTM Sites

Oops, there are no descriptions of PTM sites of SWI3C_ARATH !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Oops, there are no SNP-PTM records of SWI3C_ARATH !!

Protein-Protein Interaction

Interacting Protein	Gene Name	Interaction Type	PPI Reference
SWI3A_ARATH	SWI3A	physical	16055636
RGL2_ARATH	RGL2	physical	23893173
RGL3_ARATH	RGL3	physical	23893173
RGA_ARATH	RGA1	physical	23893173
CONS_ARATH	CO	physical	23449474
COL2_ARATH	COL2	physical	23449474
COL5_ARATH	COL5	physical	23449474
COL11_ARATH	AT4G15250	physical	23449474
AI5L4_ARATH	ABF1	physical	23449474
POF21_ARATH	AT2G31370	physical	23449474
TGA7_ARATH	AT1G77920	physical	23449474
TGA3_ARATH	TGA3	physical	23449474
TGA4_ARATH	TGA4	physical	23449474
TGA5_ARATH	OBF5	physical	23449474
DRE2F_ARATH	AT3G57600	physical	23449474
ERF53_ARATH	AT2G20880	physical	23449474
RAP21_ARATH	RAP2.1	physical	23449474
RAP22_ARATH	RAP2.2	physical	23449474
ERF56_ARATH	AT2G22200	physical	23449474
SHN2_ARATH	SHN3	physical	23449474
DRE1D_ARATH	CBF4	physical	23449474
EF102_ARATH	ERF5	physical	23449474
ERF77_ARATH	ERF10	physical	23449474
CRF6_ARATH	CRF6	physical	23449474
ERF94_ARATH	ORA59	physical	23449474
ERF84_ARATH	AT1G80580	physical	23449474
ERF25_ARATH	AT5G52020	physical	23449474
TOE2_ARATH	TOE2	physical	23449474
MYB12_ARATH	MYB12	physical	23449474
MYB46_ARATH	MYB46	physical	23449474
MY122_ARATH	MYB122	physical	23449474
FB236_ARATH	AT4G17780	physical	23449474
MYB86_ARATH	MYB86	physical	23449474
GTE11_ARATH	BET10	physical	23449474
Y3272_ARATH	AT3G27220	physical	23449474
WRK61_ARATH	WRKY61	physical	23449474
BH085_ARATH	RSL2	physical	23449474
BH054_ARATH	RSL4	physical	23449474
BH139_ARATH	AT5G43175	physical	23449474
BH086_ARATH	RSL1	physical	23449474
UNE12_ARATH	UNE12	physical	23449474
BH007_ARATH	AT1G03040	physical	23449474
HEC1_ARATH	HEC1	physical	23449474
BH080_ARATH	AT1G35460	physical	23449474
BH122_ARATH	AT1G51140	physical	23449474
PIF3_ARATH	PIF3	physical	23449474
BH130_ARATH	AT2G42280	physical	23449474
SPT_ARATH	SPT	physical	23449474
BH049_ARATH	AT1G68920	physical	23449474
BH062_ARATH	AT3G07340	physical	23449474
BH079_ARATH	AT5G62610	physical	23449474
BH010_ARATH	AT2G31220	physical	23449474
BH112_ARATH	AT1G61660	physical	23449474
BH089_ARATH	AT1G06170	physical	23449474
BH020_ARATH	NAI1	physical	23449474
BH061_ARATH	AT5G10570	physical	23449474
BH019_ARATH	AT2G22760	physical	23449474
TT8_ARATH	TT8	physical	23449474
BH095_ARATH	RGE1	physical	23449474
BH094_ARATH	AT1G22490	physical	23449474
BH096_ARATH	AT1G72210	physical	23449474
ATB53_ARATH	HB53	physical	23449474
ATB21_ARATH	HB21	physical	23449474
KNAT3_ARATH	KNAT3	physical	23449474
AGL92_ARATH	AGL92	physical	23449474
IDD15_ARATH	SGR5	physical	23449474
NFYA5_ARATH	NF-YA5	physical	23449474
NFYB8_ARATH	NF-YB8	physical	23449474
NFYC4_ARATH	NF-YC4	physical	23449474
ARR11_ARATH	ARR11	physical	23449474
ARR10_ARATH	RR10	physical	23449474
PCL1_ARATH	PCL1	physical	23449474
PHL1_ARATH	AT5G29000	physical	23449474
HSFA3_ARATH	HSFA3	physical	23449474
HFA6A_ARATH	HSFA6A	physical	23449474
SCL1_ARATH	SCL1	physical	23449474
SCL3_ARATH	SCL3	physical	23449474
SCL7_ARATH	AT3G50650	physical	23449474
SCL22_ARATH	HAM2	physical	23449474
SCL15_ARATH	AT4G36710	physical	23449474
TGT3B_ARATH	AT2G38250	physical	23449474
FAF1_ARATH	AT4G02810	physical	23449474
TCP3_ARATH	TCP3	physical	23449474
TCP8_ARATH	AT1G58100	physical	23449474
TCP22_ARATH	AT1G72010	physical	23449474
TCP13_ARATH	PTF1	physical	23449474
TCP4_ARATH	TCP4	physical	23449474
TCP20_ARATH	TCP20	physical	23449474
TCP16_ARATH	TCP16	physical	23449474
TCP7_ARATH	AT5G23280	physical	23449474
TCP19_ARATH	AT5G51910	physical	23449474
TCP5_ARATH	TCP5	physical	23449474
TCP1_ARATH	TCP1	physical	23449474
C3H29_ARATH	CZF1	physical	23449474
C3H33_ARATH	ZFN1	physical	23449474
E2FA_ARATH	E2F3	physical	23449474
DPA_ARATH	DPA	physical	23449474
E2FD_ARATH	DEL2	physical	23449474
RAVL2_ARATH	AT1G50680	physical	23449474
RAVL3_ARATH	AT1G51120	physical	23449474
VAL1_ARATH	HSI2	physical	23449474
ABI3_ARATH	ABI3	physical	23449474
ARFC_ARATH	ETT	physical	23449474
ARFR_ARATH	ARF18	physical	23449474
LBD1_ARATH	LBD1	physical	23449474
LBD40_ARATH	LBD40	physical	23449474
LBD10_ARATH	LBD10	physical	23449474
LBD22_ARATH	LBD22	physical	23449474
LBD38_ARATH	LBD38	physical	23449474
LBD29_ARATH	LBD29	physical	23449474
LBD35_ARATH	LBD35	physical	23449474
BRM_ARATH	BRM	physical	23449474

Drug and Disease Associations

• Kegg Drug
• DrugBank
• There are no disease associations of PTM sites.