UniProt ID | XRCC1_HUMAN | |
---|---|---|
UniProt AC | P18887 | |
Protein Name | DNA repair protein XRCC1 | |
Gene Name | XRCC1 | |
Organism | Homo sapiens (Human). | |
Sequence Length | 633 | |
Subcellular Localization | Nucleus . Moves from the nucleoli to the global nuclear chromatin upon DNA damage. | |
Protein Description | Involved in DNA single-strand break repair by mediating the assembly of DNA break repair protein complexes. Probably during DNA repair, negatively regulates ADP-ribose levels by modulating ADP-ribosyltransferase PARP1 activity.. | |
Protein Sequence | MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDIGNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRMFGPDKLVRAAAEKRWDRVKIVCSQPYSKDSPFGLSFVRFHSPPDKDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPEELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSRRYLMAGPGSSSEEDEASHSGGSGDEAPKLPQKQPQTKTKPTQAAGPSSPQKPPTPEETKAASPVLQEDIDIEGVQSEGQDNGAEDSGDTEDELRRVAEQKEHRLPPGQEENGEDPYAGSTDENTDSEEHQEPPDLPVPELPDFFQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDNMSDRVQFVITAQEWDPSFEEALMDNPSLAFVRPRWIYSCNEKQKLLPHQLYGVVPQA | |
Overview of Protein Modification Sites with Functional and Structural Information | ||
* ASA = Accessible Surface Area
Locations | Modification | Substrate Peptides & Secondary Structure |
ASA (%) | Reference | Orthologous Protein Cluster |
---|---|---|---|---|---|
11 | Phosphorylation | IRLRHVVSCSSQDST EEEEEEEECCCCCCH | 13.75 | 27251275 | |
13 | Phosphorylation | LRHVVSCSSQDSTHC EEEEEECCCCCCHHH | 24.43 | 27251275 | |
14 | Phosphorylation | RHVVSCSSQDSTHCA EEEEECCCCCCHHHH | 42.19 | 20873877 | |
17 | Phosphorylation | VSCSSQDSTHCAENL EECCCCCCHHHHHHH | 16.65 | 27251275 | |
18 | Phosphorylation | SCSSQDSTHCAENLL ECCCCCCHHHHHHHH | 29.30 | 20873877 | |
26 | Acetylation | HCAENLLKADTYRKW HHHHHHHHHHHHHHH | 47.59 | 26051181 | |
42 | Phosphorylation | AAKAGEKTISVVLQL HHHCCCCEEEEEEEE | 17.74 | 22210691 | |
44 | Phosphorylation | KAGEKTISVVLQLEK HCCCCEEEEEEEECC | 16.05 | 22210691 | |
115 | Acetylation | VRMFGPDKLVRAAAE CEEECHHHHHHHHHH | 52.60 | 25953088 | |
129 | Ubiquitination | EKRWDRVKIVCSQPY HHHHCEEEEEECCCC | 30.25 | - | |
138 | Ubiquitination | VCSQPYSKDSPFGLS EECCCCCCCCCCCCE | 57.28 | - | |
140 | Phosphorylation | SQPYSKDSPFGLSFV CCCCCCCCCCCCEEE | 26.35 | 21815630 | |
145 | Phosphorylation | KDSPFGLSFVRFHSP CCCCCCCEEEEECCC | 23.29 | 28857561 | |
151 | Phosphorylation | LSFVRFHSPPDKDEA CEEEEECCCCCCCCC | 35.10 | 25159151 | |
155 | Acetylation | RFHSPPDKDEAEAPS EECCCCCCCCCCCCC | 64.34 | 26051181 | |
162 | Phosphorylation | KDEAEAPSQKVTVTK CCCCCCCCCEEEEEE | 50.08 | 23312004 | |
166 | Phosphorylation | EAPSQKVTVTKLGQF CCCCCEEEEEECEEE | 29.50 | 26714015 | |
169 | Acetylation | SQKVTVTKLGQFRVK CCEEEEEECEEEECC | 46.41 | 23954790 | |
169 | Ubiquitination | SQKVTVTKLGQFRVK CCEEEEEECEEEECC | 46.41 | 21890473 | |
176 | Sumoylation | KLGQFRVKEEDESAN ECEEEECCCCCCCCC | 51.64 | - | |
176 | Sumoylation | KLGQFRVKEEDESAN ECEEEECCCCCCCCC | 51.64 | 25114211 | |
181 | Phosphorylation | RVKEEDESANSLRPG ECCCCCCCCCCCCCC | 45.10 | 28555341 | |
184 | Phosphorylation | EEDESANSLRPGALF CCCCCCCCCCCCEEE | 26.02 | 26074081 | |
193 | Phosphorylation | RPGALFFSRINKTSP CCCEEEEECCCCCCC | 25.56 | 26074081 | |
198 | Phosphorylation | FFSRINKTSPVTASD EEECCCCCCCCCCCC | 33.50 | 25159151 | |
199 | Phosphorylation | FSRINKTSPVTASDP EECCCCCCCCCCCCC | 20.98 | 25159151 | |
202 | Phosphorylation | INKTSPVTASDPAGP CCCCCCCCCCCCCCC | 24.67 | 30266825 | |
204 | Phosphorylation | KTSPVTASDPAGPSY CCCCCCCCCCCCCCH | 34.46 | 30266825 | |
210 | Phosphorylation | ASDPAGPSYAAATLQ CCCCCCCCHHHHHHH | 26.87 | 30266825 | |
211 | Phosphorylation | SDPAGPSYAAATLQA CCCCCCCHHHHHHHH | 11.91 | 30266825 | |
215 | Phosphorylation | GPSYAAATLQASSAA CCCHHHHHHHHHHHH | 18.06 | 30266825 | |
219 | Phosphorylation | AAATLQASSAASSAS HHHHHHHHHHHHCCC | 13.93 | 21955146 | |
220 | Phosphorylation | AATLQASSAASSASP HHHHHHHHHHHCCCH | 30.76 | 28176443 | |
223 | Phosphorylation | LQASSAASSASPVSR HHHHHHHHCCCHHHH | 26.59 | 21955146 | |
224 | Phosphorylation | QASSAASSASPVSRA HHHHHHHCCCHHHHH | 28.21 | 25159151 | |
226 | Phosphorylation | SSAASSASPVSRAIG HHHHHCCCHHHHHHC | 27.99 | 25159151 | |
229 | Phosphorylation | ASSASPVSRAIGSTS HHCCCHHHHHHCCCC | 21.27 | 30278072 | |
234 | Phosphorylation | PVSRAIGSTSKPQES HHHHHHCCCCCCCCC | 24.32 | 23927012 | |
234 | O-linked_Glycosylation | PVSRAIGSTSKPQES HHHHHHCCCCCCCCC | 24.32 | OGP | |
235 | Phosphorylation | VSRAIGSTSKPQESP HHHHHCCCCCCCCCC | 35.24 | 30278072 | |
236 | Phosphorylation | SRAIGSTSKPQESPK HHHHCCCCCCCCCCC | 44.00 | 23401153 | |
236 | O-linked_Glycosylation | SRAIGSTSKPQESPK HHHHCCCCCCCCCCC | 44.00 | OGP | |
237 | Acetylation | RAIGSTSKPQESPKG HHHCCCCCCCCCCCC | 51.30 | 26051181 | |
241 | Phosphorylation | STSKPQESPKGKRKL CCCCCCCCCCCCCCC | 27.02 | 29255136 | |
241 | O-linked_Glycosylation | STSKPQESPKGKRKL CCCCCCCCCCCCCCC | 27.02 | OGP | |
247 | Sumoylation | ESPKGKRKLDLNQEE CCCCCCCCCCCCHHH | 50.25 | - | |
247 | Sumoylation | ESPKGKRKLDLNQEE CCCCCCCCCCCCHHH | 50.25 | - | |
256 | Acetylation | DLNQEEKKTPSKPPA CCCHHHCCCCCCCHH | 69.79 | 25953088 | |
256 | Sumoylation | DLNQEEKKTPSKPPA CCCHHHCCCCCCCHH | 69.79 | - | |
256 | Sumoylation | DLNQEEKKTPSKPPA CCCHHHCCCCCCCHH | 69.79 | - | |
257 | Phosphorylation | LNQEEKKTPSKPPAQ CCHHHCCCCCCCHHH | 43.81 | 25159151 | |
259 | Phosphorylation | QEEKKTPSKPPAQLS HHHCCCCCCCHHHCC | 64.13 | 25159151 | |
260 | Acetylation | EEKKTPSKPPAQLSP HHCCCCCCCHHHCCC | 57.11 | 88077 | |
266 | Phosphorylation | SKPPAQLSPSVPKRP CCCHHHCCCCCCCCC | 11.75 | 23927012 | |
268 | Phosphorylation | PPAQLSPSVPKRPKL CHHHCCCCCCCCCCC | 47.91 | 25159151 | |
271 | Acetylation | QLSPSVPKRPKLPAP HCCCCCCCCCCCCCC | 78.25 | 88081 | |
279 | Phosphorylation | RPKLPAPTRTPATAP CCCCCCCCCCCCCCC | 49.64 | 22617229 | |
281 | Phosphorylation | KLPAPTRTPATAPVP CCCCCCCCCCCCCCC | 21.54 | 25159151 | |
284 | Phosphorylation | APTRTPATAPVPARA CCCCCCCCCCCCCCC | 32.47 | 24732914 | |
296 | Phosphorylation | ARAQGAVTGKPRGEG CCCCCCCCCCCCCCC | 38.67 | 22912867 | |
296 | O-linked_Glycosylation | ARAQGAVTGKPRGEG CCCCCCCCCCCCCCC | 38.67 | 68722349 | |
298 | Acetylation | AQGAVTGKPRGEGTE CCCCCCCCCCCCCCC | 23.36 | 23954790 | |
310 | Methylation | GTEPRRPRAGPEELG CCCCCCCCCCHHHHH | 50.82 | 115920125 | |
341 | Ubiquitination | FRSELRDKALELGAK CHHHHHHHHHHHCCC | 48.73 | - | |
348 | Ubiquitination | KALELGAKYRPDWTR HHHHHCCCCCCCCCC | 39.74 | - | |
348 | Acetylation | KALELGAKYRPDWTR HHHHHCCCCCCCCCC | 39.74 | 25953088 | |
357 | Phosphorylation | RPDWTRDSTHLICAF CCCCCCCCCEEEEEE | 17.90 | 20068231 | |
358 | Phosphorylation | PDWTRDSTHLICAFA CCCCCCCCEEEEEEC | 25.62 | 20873877 | |
367 | Phosphorylation | LICAFANTPKYSQVL EEEEECCCCCHHHHC | 20.09 | 25159151 | |
369 | Ubiquitination | CAFANTPKYSQVLGL EEECCCCCHHHHCCC | 56.34 | - | |
370 | Phosphorylation | AFANTPKYSQVLGLG EECCCCCHHHHCCCC | 12.92 | - | |
371 | Phosphorylation | FANTPKYSQVLGLGG ECCCCCHHHHCCCCC | 21.68 | 16397295 | |
383 | Ubiquitination | LGGRIVRKEWVLDCH CCCEEEEEEHHHHHH | 45.06 | - | |
383 | Acetylation | LGGRIVRKEWVLDCH CCCEEEEEEHHHHHH | 45.06 | 26051181 | |
398 | Phosphorylation | RMRRRLPSRRYLMAG HHHHHCCCCCEEECC | 33.70 | 24719451 | |
401 | Phosphorylation | RRLPSRRYLMAGPGS HHCCCCCEEECCCCC | 10.34 | 20068231 | |
408 | Phosphorylation | YLMAGPGSSSEEDEA EEECCCCCCCHHHHH | 33.55 | 22115753 | |
409 | Phosphorylation | LMAGPGSSSEEDEAS EECCCCCCCHHHHHH | 47.92 | 22115753 | |
410 | Phosphorylation | MAGPGSSSEEDEASH ECCCCCCCHHHHHHH | 46.86 | 22115753 | |
416 | Phosphorylation | SSEEDEASHSGGSGD CCHHHHHHHCCCCCC | 19.01 | 22115753 | |
418 | Phosphorylation | EEDEASHSGGSGDEA HHHHHHHCCCCCCCC | 42.21 | 22115753 | |
421 | Phosphorylation | EASHSGGSGDEAPKL HHHHCCCCCCCCCCC | 46.74 | 22115753 | |
431 | Ubiquitination | EAPKLPQKQPQTKTK CCCCCCCCCCCCCCC | 63.10 | - | |
431 | Acetylation | EAPKLPQKQPQTKTK CCCCCCCCCCCCCCC | 63.10 | 26051181 | |
435 | Phosphorylation | LPQKQPQTKTKPTQA CCCCCCCCCCCCCCC | 47.57 | 21406692 | |
437 | Phosphorylation | QKQPQTKTKPTQAAG CCCCCCCCCCCCCCC | 45.72 | 29209046 | |
440 | Phosphorylation | PQTKTKPTQAAGPSS CCCCCCCCCCCCCCC | 32.18 | 23927012 | |
440 | O-linked_Glycosylation | PQTKTKPTQAAGPSS CCCCCCCCCCCCCCC | 32.18 | 19664995 | |
446 | Phosphorylation | PTQAAGPSSPQKPPT CCCCCCCCCCCCCCC | 54.45 | 25159151 | |
446 | O-linked_Glycosylation | PTQAAGPSSPQKPPT CCCCCCCCCCCCCCC | 54.45 | 19664995 | |
447 | Phosphorylation | TQAAGPSSPQKPPTP CCCCCCCCCCCCCCH | 34.19 | 20201521 | |
447 | O-linked_Glycosylation | TQAAGPSSPQKPPTP CCCCCCCCCCCCCCH | 34.19 | 19664995 | |
453 | Phosphorylation | SSPQKPPTPEETKAA CCCCCCCCHHHHHCC | 52.43 | 20201521 | |
453 | O-linked_Glycosylation | SSPQKPPTPEETKAA CCCCCCCCHHHHHCC | 52.43 | 19664995 | |
457 | Phosphorylation | KPPTPEETKAASPVL CCCCHHHHHCCCCCC | 25.07 | 23927012 | |
461 | Phosphorylation | PEETKAASPVLQEDI HHHHHCCCCCCHHCC | 22.02 | 30278072 | |
475 | Phosphorylation | IDIEGVQSEGQDNGA CCCCCCCCCCCCCCC | 41.09 | 30278072 | |
485 | Phosphorylation | QDNGAEDSGDTEDEL CCCCCCCCCCCHHHH | 30.03 | 25159151 | |
488 | Phosphorylation | GAEDSGDTEDELRRV CCCCCCCCHHHHHHH | 49.19 | 25159151 | |
515 | Phosphorylation | EENGEDPYAGSTDEN CCCCCCCCCCCCCCC | 35.60 | 20873877 | |
518 | Phosphorylation | GEDPYAGSTDENTDS CCCCCCCCCCCCCCC | 25.23 | 23909892 | |
519 | Phosphorylation | EDPYAGSTDENTDSE CCCCCCCCCCCCCCH | 46.55 | 23909892 | |
523 | Phosphorylation | AGSTDENTDSEEHQE CCCCCCCCCCHHCCC | 38.56 | 25218447 | |
525 | Phosphorylation | STDENTDSEEHQEPP CCCCCCCCHHCCCCC | 42.73 | 20873877 | |
578 | Phosphorylation | GELEDNMSDRVQFVI CCCCCCCCCCEEEEE | 28.64 | - | |
618 | Ubiquitination | WIYSCNEKQKLLPHQ EEEECCHHHHCCHHH | 38.45 | - | |
618 | Acetylation | WIYSCNEKQKLLPHQ EEEECCHHHHCCHHH | 38.45 | 26051181 | |
620 | Ubiquitination | YSCNEKQKLLPHQLY EECCHHHHCCHHHHC | 64.16 | - | |
620 | Acetylation | YSCNEKQKLLPHQLY EECCHHHHCCHHHHC | 64.16 | 26051181 | |
627 | Phosphorylation | KLLPHQLYGVVPQA- HCCHHHHCCCCCCC- | 10.99 | 28152594 |
Modified Location | Modified Residue | Modification | Type of Upstream Proteins | Gene Name of Upstream Proteins | UniProt AC of Upstream Proteins | Sources |
---|---|---|---|---|---|---|
184 | S | Phosphorylation | Kinase | CHEK2 | O96017 | GPS |
210 | S | Phosphorylation | Kinase | CHEK2 | O96017 | GPS |
284 | T | Phosphorylation | Kinase | CHEK2 | O96017 | GPS |
371 | S | Phosphorylation | Kinase | DNAPK | P78527 | PSP |
408 | S | Phosphorylation | Kinase | CK2-FAMILY | - | GPS |
408 | S | Phosphorylation | Kinase | CSNK2A1 | P68400 | GPS |
409 | S | Phosphorylation | Kinase | CK2-FAMILY | - | GPS |
409 | S | Phosphorylation | Kinase | CSNK2A1 | P68400 | GPS |
410 | S | Phosphorylation | Kinase | CSNK2A1 | P68400 | GPS |
410 | S | Phosphorylation | Kinase | CK2-FAMILY | - | GPS |
416 | S | Phosphorylation | Kinase | CSNK2A1 | P68400 | GPS |
418 | S | Phosphorylation | Kinase | CSNK2A1 | P68400 | GPS |
421 | S | Phosphorylation | Kinase | CSNK2A1 | P68400 | GPS |
421 | S | Phosphorylation | Kinase | CK2-FAMILY | - | GPS |
475 | S | Phosphorylation | Kinase | CSNK2A1 | P68400 | GPS |
475 | S | Phosphorylation | Kinase | CK2-FAMILY | - | GPS |
485 | S | Phosphorylation | Kinase | CK2-FAMILY | - | GPS |
485 | S | Phosphorylation | Kinase | CSNK2A2 | P19784 | GPS |
485 | S | Phosphorylation | Kinase | CSNK2A1 | P68400 | GPS |
488 | T | Phosphorylation | Kinase | CSNK2A2 | P19784 | GPS |
488 | T | Phosphorylation | Kinase | CK2-FAMILY | - | GPS |
488 | T | Phosphorylation | Kinase | CSNK2A1 | P68400 | GPS |
515 | Y | Phosphorylation | Kinase | CSNK2A1 | P68400 | GPS |
518 | S | Phosphorylation | Kinase | CSNK2A1 | P68400 | GPS |
518 | S | Phosphorylation | Kinase | CSNK2A2 | P19784 | GPS |
518 | S | Phosphorylation | Kinase | CK2-FAMILY | - | GPS |
519 | T | Phosphorylation | Kinase | CSNK2A2 | P19784 | GPS |
519 | T | Phosphorylation | Kinase | CSNK2A1 | P68400 | GPS |
519 | T | Phosphorylation | Kinase | CK2-FAMILY | - | GPS |
523 | T | Phosphorylation | Kinase | CSNK2A2 | P19784 | GPS |
523 | T | Phosphorylation | Kinase | CK2-FAMILY | - | GPS |
523 | T | Phosphorylation | Kinase | CSNK2A1 | P68400 | GPS |
525 | S | Phosphorylation | Kinase | CK2-FAMILY | - | GPS |
525 | S | Phosphorylation | Kinase | CSNK2A1 | P68400 | GPS |
578 | S | Phosphorylation | Kinase | CSNK2A1 | P68400 | GPS |
- | K | Ubiquitination | E3 ubiquitin ligase | RNF146 | Q9NTX7 | PMID:21825151 |
Modified Location | Modified Residue | Modification | Function | Reference |
---|---|---|---|---|
371 | S | Phosphorylation |
| 16397295 |
* Distance = the distance between SAP position and PTM sites.
Modified Location | Modification | Variant Position (Distance <= 10) |
Residue Change | SAP | Related Disease | Reference |
---|---|---|---|---|---|---|
Oops, there are no SNP-PTM records of XRCC1_HUMAN !! |
Kegg Disease | ||||||
---|---|---|---|---|---|---|
There are no disease associations of PTM sites. | ||||||
OMIM Disease | ||||||
There are no disease associations of PTM sites. | ||||||
Kegg Drug | ||||||
There are no disease associations of PTM sites. | ||||||
DrugBank | ||||||
There are no disease associations of PTM sites. |
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Phosphorylation | |
Reference | PubMed |
"Specific recognition of a multiply phosphorylated motif in the DNArepair scaffold XRCC1 by the FHA domain of human PNK."; Ali A.A., Jukes R.M., Pearl L.H., Oliver A.W.; Nucleic Acids Res. 37:1701-1712(2009). Cited for: X-RAY CRYSTALLOGRAPHY (1.85 ANGSTROMS) OF 515-522 IN COMPLEX WITHPNKP, AND PHOSPHORYLATION AT SER-518; THR-519 AND THR-523. | |
"Quantitative phosphoproteomic analysis of T cell receptor signalingreveals system-wide modulation of protein-protein interactions."; Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K.,Rodionov V., Han D.K.; Sci. Signal. 2:RA46-RA46(2009). Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-198; SER-199; SER-226;SER-241; THR-453; SER-461; SER-485 AND THR-488, AND MASS SPECTROMETRY. | |
"Lys-N and trypsin cover complementary parts of the phosphoproteome ina refined SCX-based approach."; Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J.,Mohammed S.; Anal. Chem. 81:4493-4501(2009). Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-211; SER-226; SER-446;SER-447; THR-453 AND THR-457, AND MASS SPECTROMETRY. | |
"A quantitative atlas of mitotic phosphorylation."; Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E.,Elledge S.J., Gygi S.P.; Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008). Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-199; SER-226; SER-241;THR-257; SER-259; SER-266; SER-408; SER-409; SER-410; SER-418;SER-421; SER-447 AND THR-453, AND MASS SPECTROMETRY. | |
"Evaluation of the low-specificity protease elastase for large-scalephosphoproteome analysis."; Wang B., Malik R., Nigg E.A., Korner R.; Anal. Chem. 80:9526-9533(2008). Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-241, AND MASSSPECTROMETRY. | |
"Global proteomic profiling of phosphopeptides using electron transferdissociation tandem mass spectrometry."; Molina H., Horn D.M., Tang N., Mathivanan S., Pandey A.; Proc. Natl. Acad. Sci. U.S.A. 104:2199-2204(2007). Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-266; SER-447 ANDTHR-453, AND MASS SPECTROMETRY. | |
"XRCC1 is phosphorylated by DNA-dependent protein kinase in responseto DNA damage."; Levy N., Martz A., Bresson A., Spenlehauer C., de Murcia G.,Menissier-de Murcia J.; Nucleic Acids Res. 34:32-41(2006). Cited for: SUBUNIT, AND PHOSPHORYLATION AT SER-371. | |
"Global, in vivo, and site-specific phosphorylation dynamics insignaling networks."; Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P.,Mann M.; Cell 127:635-648(2006). Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-408; SER-409; SER-410;SER-416; SER-418 AND SER-421, AND MASS SPECTROMETRY. |