TIM_MOUSE - dbPTM
TIM_MOUSE - PTM Information in dbPTM
Basic Information of Protein
UniProt ID TIM_MOUSE
UniProt AC Q9R1X4
Protein Name Protein timeless homolog
Gene Name Timeless {ECO:0000312|MGI:MGI:1321393}
Organism Mus musculus (Mouse).
Sequence Length 1197
Subcellular Localization Nucleus .
Protein Description Plays an important role in the control of DNA replication, maintenance of replication fork stability, maintenance of genome stability throughout normal DNA replication and in the regulation of the circadian clock. Involved in the determination of period length and in the DNA damage-dependent phase advancing of the circadian clock. Negatively regulates CLOCK|NPAS2-ARTNL/BMAL1|ARTNL2/BMAL2-induced transactivation of PER1 possibly via translocation of PER1 into the nucleus. Forms a complex with TIPIN and this complex regulates DNA replication processes under both normal and stress conditions, stabilizes replication forks and influences both CHEK1 phosphorylation and the intra-S phase checkpoint in response to genotoxic stress. Timeless promotes TIPIN nuclear localization. Involved in cell survival after DNA damage or replication stress. May be specifically required for the ATR-CHEK1 pathway in the replication checkpoint induced by hydroxyurea or ultraviolet light. May also play an important role in epithelial cell morphogenesis and formation of branching tubules..
Protein Sequence MDLYMMNCELLATCSALGYLEGGTYHKEPDCLESVKDLIRYLRHEDETRDVRQQLGAAQILQSDLLPILTQHRQDKPLFDAVIRLMVNLTQPALLCFGSVPKDSSVRHHFLQVLTYLQAYKEAFASEKAFGVLSETLYELLQLGWEDRQEEDNLLIERILLLVRNILHVPANLEQEKSIDDDASIHDRLLWAIHLSGMDDLLLFLSSSSAEQQWSLHVLEIISLMFRDQTPEQLAGVGQGRLAQERSTDVAELEVLRQREMAEKRARALQRGNRHSRFGGSYIVQGLKSIGEKDVVFHKGLHNLQNYSSDLGKQPRRVPKRRQAAQELSVHRRSVLNVRLFLRDFCSEFLENCYNPLMGAVKDHLLRERAQQHDETYYMWAMAFFMAFNRAATFRPGLVSETLSIRTFHFVEQNLTNYYEMMLTDRKEAASWARRMHLALKAYQELLATVNEMDMCPDEAVRESSRIIKNNIFYMMEYRELFLALFRKFDERYHPRSFLRDLVETTHLFLKMLERFCRSRGNLMVQNKRKKRKKKKKVQDQGVAFSQSPGELEAMWPALAEQLLQCAQDPELSVDPVVPFDAASEVPVEEQRVEAMVRIQDCLTAGQAPQALALLRSAREVWPEGNAFGSPVISPGEEMQLLKQILSTPLPRQQEPEEGDAEEEEEEEEEEELQVVQVSEKEFNFLEYLKRFASSTIVRAYVLLLRSYRQNSAHTNHCIAKMLHRLAHGLGMEALLFQLSLFCLFNRLLSDPAAAAYKELVTFAKYIIGKFFALAAVNQKAFVELLFWKNTAVVREMTQGYGSLDSGSSSHRAPLWSPEEEAQLQELYLAHKDVEGQDVVETILAHLKVVPRTRKQVIHHLVRMGLADSVKEFQKRKGTQIVLWTEDQELELQRLFEEFRDSDDVLGQIMKNITAKRSRARVVDKLLALGLVSERRQLYKKRRKKLAPSCMQNGEKSPRDPWQEDPEEEDEHLPEDESEDEESEEGLPSGQGQGSSSLSAENLGESLRQEGLSAPLLWLQSSLIRAANDREEDGCSQAIPLVPLTEENEEAMENEQFQHLLRKLGIRPPSSGQETFWRIPAKLSSTQLRRVAASLSQQENEEEREEEPEPGVPGEQGPSEEHRTEALRALLSARKRKAGLGPTEEEATGEEEWNSAPKKRQLLDSDEEEDDEGRRQAVSGTPRVHRKKRFQIEDEDD
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
228 (in isoform 4)Phosphorylation-45.5029895711
281PhosphorylationRHSRFGGSYIVQGLK
CCCCCCCCHHHHCCH
16.44-
288AcetylationSYIVQGLKSIGEKDV
CHHHHCCHHCCCCCE
47.0222826441
299AcetylationEKDVVFHKGLHNLQN
CCCEEECHHHHHHHH
52.2622826441
750PhosphorylationCLFNRLLSDPAAAAY
HHHHHHCCCHHHHHH
46.2524759943
798PhosphorylationTAVVREMTQGYGSLD
HHHHHHHHCCCCCCC
17.6821183079
940AcetylationSERRQLYKKRRKKLA
HHHHHHHHHHHHHHH
48.696566487
941AcetylationERRQLYKKRRKKLAP
HHHHHHHHHHHHHHH
43.836566535
949 (in isoform 3)Phosphorylation-19.3329895711
949 (in isoform 2)Phosphorylation-19.3329895711
957PhosphorylationCMQNGEKSPRDPWQE
HHHCCCCCCCCCCCC
22.3620139300
978PhosphorylationEHLPEDESEDEESEE
CCCCCCCCCCCCCCC
63.7722802335
983PhosphorylationDESEDEESEEGLPSG
CCCCCCCCCCCCCCC
38.6122802335
1070PhosphorylationKLGIRPPSSGQETFW
HCCCCCCCCCCCCEE
50.1923140645
1071PhosphorylationLGIRPPSSGQETFWR
CCCCCCCCCCCCEEE
50.7122817900
1075PhosphorylationPPSSGQETFWRIPAK
CCCCCCCCEEECCCC
22.1723140645
1084PhosphorylationWRIPAKLSSTQLRRV
EECCCCCCHHHHHHH
30.5423140645
1085PhosphorylationRIPAKLSSTQLRRVA
ECCCCCCHHHHHHHH
30.5223140645
1086PhosphorylationIPAKLSSTQLRRVAA
CCCCCCHHHHHHHHH
28.3923140645
1132PhosphorylationEALRALLSARKRKAG
HHHHHHHHHHHHHCC
27.2027149854
1165PhosphorylationKKRQLLDSDEEEDDE
HHHHCCCCCCCCCHH
47.0627087446
1165 (in isoform 6)Phosphorylation-47.0624453211
1178 (in isoform 6)Phosphorylation-4.0325338131
1179PhosphorylationEGRRQAVSGTPRVHR
HHHHHHHCCCCCCCC
39.7129514104

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of TIM_MOUSE !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of TIM_MOUSE !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of TIM_MOUSE !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
PER1_MOUSEPer1physical
9856465
PER2_MOUSEPer2physical
9856465
TIM_MOUSETimelessphysical
20211142
TIM_HUMANTIMELESSphysical
20360068
TIPIN_HUMANTIPINphysical
20360068
CRY1_HUMANCRY1physical
20360068
RFA2_HUMANRPA2physical
20360068
RFA1_MOUSERpa1physical
17141802
CLSPN_MOUSEClspnphysical
17141802
TIPIN_MOUSETipinphysical
17141802
TIM_MOUSETimelessphysical
12875843
PARP1_HUMANPARP1physical
26496610
SP110_HUMANSP110physical
26496610
MCM2_HUMANMCM2physical
26496610
MCM3_HUMANMCM3physical
26496610
MCM6_HUMANMCM6physical
26496610
MCM7_HUMANMCM7physical
26496610
SPTN1_HUMANSPTAN1physical
26496610
TAP2_HUMANTAP2physical
26496610
CLIP2_HUMANCLIP2physical
26496610
RBM10_HUMANRBM10physical
26496610
CHM2B_HUMANCHMP2Bphysical
26496610
HSPB8_HUMANHSPB8physical
26496610
S43A3_HUMANSLC43A3physical
26496610
TRPM7_HUMANTRPM7physical
26496610
TIPIN_HUMANTIPINphysical
26496610
MCM10_HUMANMCM10physical
26496610
E41L5_HUMANEPB41L5physical
26496610
CLSPN_HUMANCLSPNphysical
26496610
TPC13_HUMANTRAPPC13physical
26496610
SLD5_HUMANGINS4physical
26496610
GHDC_HUMANGHDCphysical
26496610
USMG5_HUMANUSMG5physical
26496610

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of TIM_MOUSE

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Related Literatures of Post-Translational Modification

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