UniProt ID | DNM3B_HUMAN | |
---|---|---|
UniProt AC | Q9UBC3 | |
Protein Name | DNA (cytosine-5)-methyltransferase 3B | |
Gene Name | DNMT3B | |
Organism | Homo sapiens (Human). | |
Sequence Length | 853 | |
Subcellular Localization | Nucleus . | |
Protein Description | Required for genome-wide de novo methylation and is essential for the establishment of DNA methylation patterns during development. DNA methylation is coordinated with methylation of histones. May preferentially methylates nucleosomal DNA within the nucleosome core region. May function as transcriptional co-repressor by associating with CBX4 and independently of DNA methylation. Seems to be involved in gene silencing (By similarity). In association with DNMT1 and via the recruitment of CTCFL/BORIS, involved in activation of BAG1 gene expression by modulating dimethylation of promoter histone H3 at H3K4 and H3K9. Isoforms 4 and 5 are probably not functional due to the deletion of two conserved methyltransferase motifs. Function as transcriptional corepressor by associating with ZHX1. Required for DUX4 silencing in somatic cells. [PubMed: 27153398] | |
Protein Sequence | MKGDTRHLNGEEDAGGREDSILVNGACSDQSSDSPPILEAIRTPEIRGRRSSSRLSKREVSSLLSYTQDLTGDGDGEDGDGSDTPVMPKLFRETRTRSESPAVRTRNNNSVSSRERHRPSPRSTRGRQGRNHVDESPVEFPATRSLRRRATASAGTPWPSPPSSYLTIDLTDDTEDTHGTPQSSSTPYARLAQDSQQGGMESPQVEADSGDGDSSEYQDGKEFGIGDLVWGKIKGFSWWPAMVVSWKATSKRQAMSGMRWVQWFGDGKFSEVSADKLVALGLFSQHFNLATFNKLVSYRKAMYHALEKARVRAGKTFPSSPGDSLEDQLKPMLEWAHGGFKPTGIEGLKPNNTQPVVNKSKVRRAGSRKLESRKYENKTRRRTADDSATSDYCPAPKRLKTNCYNNGKDRGDEDQSREQMASDVANNKSSLEDGCLSCGRKNPVSFHPLFEGGLCQTCRDRFLELFYMYDDDGYQSYCTVCCEGRELLLCSNTSCCRCFCVECLEVLVGTGTAAEAKLQEPWSCYMCLPQRCHGVLRRRKDWNVRLQAFFTSDTGLEYEAPKLYPAIPAARRRPIRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAVGTVKHEGNIKYVNDVRNITKKNIEEWGPFDLVIGGSPCNDLSNVNPARKGLYEGTGRLFFEFYHLLNYSRPKEGDDRPFFWMFENVVAMKVGDKRDISRFLECNPVMIDAIKVSAAHRARYFWGNLPGMNRPVIASKNDKLELQDCLEYNRIAKLKKVQTITTKSNSIKQGKNQLFPVVMNGKEDVLWCTELERIFGFPVHYTDVSNMGRGARQKLLGRSWSVPVIRHLFAPLKDYFACE | |
Overview of Protein Modification Sites with Functional and Structural Information | ||
* ASA = Accessible Surface Area
Locations | Modification | Substrate Peptides & Secondary Structure |
ASA (%) | Reference | Orthologous Protein Cluster |
---|---|---|---|---|---|
4 (in isoform 6) | Phosphorylation | - | 34.74 | 28355574 | |
9 (in isoform 6) | Phosphorylation | - | 50.10 | 28355574 | |
12 (in isoform 6) | Phosphorylation | - | 55.34 | 28355574 | |
17 (in isoform 6) | Phosphorylation | - | 43.56 | 26552605 | |
20 | Phosphorylation | DAGGREDSILVNGAC CCCCCCCCEEECCCC | 17.05 | 21406692 | |
28 | Phosphorylation | ILVNGACSDQSSDSP EEECCCCCCCCCCCC | 37.84 | 21406692 | |
31 | Phosphorylation | NGACSDQSSDSPPIL CCCCCCCCCCCCCHH | 40.89 | 21406692 | |
32 | Phosphorylation | GACSDQSSDSPPILE CCCCCCCCCCCCHHH | 36.15 | 21406692 | |
34 | Phosphorylation | CSDQSSDSPPILEAI CCCCCCCCCCHHHHH | 34.23 | 21406692 | |
43 | Phosphorylation | PILEAIRTPEIRGRR CHHHHHCCHHHCCCC | 21.11 | 24719451 | |
43 (in isoform 8) | Phosphorylation | - | 21.11 | 24719451 | |
51 | Phosphorylation | PEIRGRRSSSRLSKR HHHCCCCCCCCCCHH | 31.16 | - | |
52 | Phosphorylation | EIRGRRSSSRLSKRE HHCCCCCCCCCCHHH | 20.05 | - | |
53 | Phosphorylation | IRGRRSSSRLSKREV HCCCCCCCCCCHHHH | 38.19 | 21406692 | |
56 | Phosphorylation | RRSSSRLSKREVSSL CCCCCCCCHHHHHHH | 28.67 | 21406692 | |
61 | Phosphorylation | RLSKREVSSLLSYTQ CCCHHHHHHHHHHHH | 15.54 | 21406692 | |
62 | Phosphorylation | LSKREVSSLLSYTQD CCHHHHHHHHHHHHC | 38.21 | 23532336 | |
65 | Phosphorylation | REVSSLLSYTQDLTG HHHHHHHHHHHCCCC | 31.28 | 21406692 | |
66 | Phosphorylation | EVSSLLSYTQDLTGD HHHHHHHHHHCCCCC | 14.37 | 23532336 | |
67 | Phosphorylation | VSSLLSYTQDLTGDG HHHHHHHHHCCCCCC | 16.54 | 24173317 | |
71 | Phosphorylation | LSYTQDLTGDGDGED HHHHHCCCCCCCCCC | 41.33 | 21406692 | |
82 | Phosphorylation | DGEDGDGSDTPVMPK CCCCCCCCCCCCHHH | 42.95 | 19664995 | |
84 | Phosphorylation | EDGDGSDTPVMPKLF CCCCCCCCCCHHHHH | 21.34 | 21406692 | |
89 | Sumoylation | SDTPVMPKLFRETRT CCCCCHHHHHHHCCC | 42.01 | 28112733 | |
94 | Phosphorylation | MPKLFRETRTRSESP HHHHHHHCCCCCCCC | 32.84 | 21406692 | |
96 | Phosphorylation | KLFRETRTRSESPAV HHHHHCCCCCCCCCC | 46.06 | 21406692 | |
96 (in isoform 8) | Phosphorylation | - | 46.06 | 27732954 | |
98 | Phosphorylation | FRETRTRSESPAVRT HHHCCCCCCCCCCCC | 41.64 | 30576142 | |
98 (in isoform 8) | Phosphorylation | - | 41.64 | 27732954 | |
100 | Phosphorylation | ETRTRSESPAVRTRN HCCCCCCCCCCCCCC | 21.29 | 26055452 | |
100 (in isoform 8) | Phosphorylation | - | 21.29 | 24719451 | |
103 (in isoform 8) | Phosphorylation | - | 7.93 | 24719451 | |
105 | Phosphorylation | SESPAVRTRNNNSVS CCCCCCCCCCCCCCC | 31.02 | 29449344 | |
110 | Phosphorylation | VRTRNNNSVSSRERH CCCCCCCCCCCCCCC | 26.04 | 21406692 | |
112 | Phosphorylation | TRNNNSVSSRERHRP CCCCCCCCCCCCCCC | 24.41 | 21406692 | |
113 | Phosphorylation | RNNNSVSSRERHRPS CCCCCCCCCCCCCCC | 35.68 | 21406692 | |
120 | Phosphorylation | SRERHRPSPRSTRGR CCCCCCCCCCCCCCC | 32.66 | 17081983 | |
136 | Phosphorylation | GRNHVDESPVEFPAT CCCCCCCCCCCCCCC | 29.77 | 23401153 | |
143 | Phosphorylation | SPVEFPATRSLRRRA CCCCCCCCHHHHHHH | 22.49 | 24732914 | |
145 | Phosphorylation | VEFPATRSLRRRATA CCCCCCHHHHHHHHC | 23.13 | 26434776 | |
151 | Phosphorylation | RSLRRRATASAGTPW HHHHHHHHCCCCCCC | 21.23 | 21406692 | |
153 | Phosphorylation | LRRRATASAGTPWPS HHHHHHCCCCCCCCC | 23.91 | 21406692 | |
156 | Phosphorylation | RATASAGTPWPSPPS HHHCCCCCCCCCCCC | 23.15 | 21406692 | |
160 | Phosphorylation | SAGTPWPSPPSSYLT CCCCCCCCCCCCEEE | 45.64 | 21406692 | |
163 | Phosphorylation | TPWPSPPSSYLTIDL CCCCCCCCCEEEEEC | 34.69 | 21406692 | |
164 | Phosphorylation | PWPSPPSSYLTIDLT CCCCCCCCEEEEECC | 29.90 | 21406692 | |
165 | Phosphorylation | WPSPPSSYLTIDLTD CCCCCCCEEEEECCC | 16.53 | 21406692 | |
167 | Phosphorylation | SPPSSYLTIDLTDDT CCCCCEEEEECCCCC | 12.29 | 21406692 | |
171 | Phosphorylation | SYLTIDLTDDTEDTH CEEEEECCCCCCCCC | 28.25 | 21406692 | |
174 | Phosphorylation | TIDLTDDTEDTHGTP EEECCCCCCCCCCCC | 38.27 | 21406692 | |
177 | Phosphorylation | LTDDTEDTHGTPQSS CCCCCCCCCCCCCCC | 18.90 | 21406692 | |
180 | Phosphorylation | DTEDTHGTPQSSSTP CCCCCCCCCCCCCCC | 15.56 | 21406692 | |
183 | Phosphorylation | DTHGTPQSSSTPYAR CCCCCCCCCCCCCCH | 27.71 | 21406692 | |
184 | Phosphorylation | THGTPQSSSTPYARL CCCCCCCCCCCCCHH | 32.74 | 21406692 | |
185 | Phosphorylation | HGTPQSSSTPYARLA CCCCCCCCCCCCHHC | 38.35 | 21406692 | |
186 | Phosphorylation | GTPQSSSTPYARLAQ CCCCCCCCCCCHHCH | 23.44 | 21406692 | |
195 | Phosphorylation | YARLAQDSQQGGMES CCHHCHHHHCCCCCC | 16.60 | 21406692 | |
202 | Phosphorylation | SQQGGMESPQVEADS HHCCCCCCCCEECCC | 16.25 | 19664995 | |
209 | Phosphorylation | SPQVEADSGDGDSSE CCCEECCCCCCCCHH | 45.92 | 19664995 | |
214 | Phosphorylation | ADSGDGDSSEYQDGK CCCCCCCCHHCCCCC | 30.51 | 19664995 | |
215 | Phosphorylation | DSGDGDSSEYQDGKE CCCCCCCHHCCCCCC | 45.09 | 28450419 | |
217 | Phosphorylation | GDGDSSEYQDGKEFG CCCCCHHCCCCCCCC | 17.53 | 30576142 | |
270 | Phosphorylation | WFGDGKFSEVSADKL HHCCCCCCCCCHHHH | 40.34 | 27251275 | |
287 (in isoform 7) | Phosphorylation | - | 6.59 | 25159151 | |
291 (in isoform 7) | Phosphorylation | - | 30.79 | 25159151 | |
301 | Ubiquitination | KLVSYRKAMYHALEK HHHHHHHHHHHHHHH | 8.51 | 29967540 | |
303 | Phosphorylation | VSYRKAMYHALEKAR HHHHHHHHHHHHHHH | 6.71 | - | |
320 | Phosphorylation | AGKTFPSSPGDSLED CCCCCCCCCCCCHHH | 32.89 | 25159151 | |
321 (in isoform 8) | Phosphorylation | - | 55.75 | 25159151 | |
324 | Phosphorylation | FPSSPGDSLEDQLKP CCCCCCCCHHHHHHH | 39.30 | 24173317 | |
325 (in isoform 8) | Phosphorylation | - | 11.35 | 25159151 | |
332 | Ubiquitination | LEDQLKPMLEWAHGG HHHHHHHHHHHHHCC | 5.18 | 21963094 | |
335 | Ubiquitination | QLKPMLEWAHGGFKP HHHHHHHHHHCCCCC | 6.92 | 29967540 | |
353 | Phosphorylation | EGLKPNNTQPVVNKS CCCCCCCCCCCCCHH | 40.67 | 20068231 | |
363 (in isoform 2) | Phosphorylation | - | 26.85 | 25159151 | |
363 (in isoform 3) | Phosphorylation | - | 26.85 | 25159151 | |
363 (in isoform 4) | Phosphorylation | - | 26.85 | 25159151 | |
363 (in isoform 5) | Phosphorylation | - | 26.85 | 25159151 | |
366 | Ubiquitination | KSKVRRAGSRKLESR HHHHHHCCCHHHHHH | 26.60 | 21963094 | |
367 | Phosphorylation | SKVRRAGSRKLESRK HHHHHCCCHHHHHHH | 25.84 | 19664995 | |
367 (in isoform 2) | Phosphorylation | - | 25.84 | 25159151 | |
367 (in isoform 3) | Phosphorylation | - | 25.84 | 25159151 | |
367 (in isoform 4) | Phosphorylation | - | 25.84 | 25159151 | |
367 (in isoform 5) | Phosphorylation | - | 25.84 | 25159151 | |
375 (in isoform 6) | Phosphorylation | - | 24.51 | 25159151 | |
377 | Ubiquitination | LESRKYENKTRRRTA HHHHHCCCCCCCCCC | 48.16 | 29967540 | |
378 | Ubiquitination | ESRKYENKTRRRTAD HHHHCCCCCCCCCCC | 31.31 | 21963094 | |
379 (in isoform 6) | Phosphorylation | - | 40.78 | 25159151 | |
383 | Phosphorylation | ENKTRRRTADDSATS CCCCCCCCCCCCCCC | 32.40 | 19664994 | |
387 | Phosphorylation | RRRTADDSATSDYCP CCCCCCCCCCCCCCC | 33.71 | 21712546 | |
389 | Phosphorylation | RTADDSATSDYCPAP CCCCCCCCCCCCCCC | 26.53 | 26552605 | |
389 | Ubiquitination | RTADDSATSDYCPAP CCCCCCCCCCCCCCC | 26.53 | 29967540 | |
390 | Phosphorylation | TADDSATSDYCPAPK CCCCCCCCCCCCCCC | 26.71 | 29396449 | |
392 | Phosphorylation | DDSATSDYCPAPKRL CCCCCCCCCCCCCCC | 10.49 | 28985074 | |
397 | Ubiquitination | SDYCPAPKRLKTNCY CCCCCCCCCCCCCCC | 72.90 | 29967540 | |
401 | Phosphorylation | PAPKRLKTNCYNNGK CCCCCCCCCCCCCCC | 34.80 | - | |
404 | Phosphorylation | KRLKTNCYNNGKDRG CCCCCCCCCCCCCCC | 17.46 | - | |
408 | Ubiquitination | TNCYNNGKDRGDEDQ CCCCCCCCCCCCHHH | 46.50 | 21963094 | |
410 | Citrullination | CYNNGKDRGDEDQSR CCCCCCCCCCHHHHH | 58.93 | - | |
410 | Citrullination | CYNNGKDRGDEDQSR CCCCCCCCCCHHHHH | 58.93 | - | |
416 | Phosphorylation | DRGDEDQSREQMASD CCCCHHHHHHHHHHH | 50.54 | - | |
420 | Ubiquitination | EDQSREQMASDVANN HHHHHHHHHHHHHHC | 3.10 | 21963094 | |
428 | Ubiquitination | ASDVANNKSSLEDGC HHHHHHCCHHHHCCC | 41.03 | 21963094 | |
466 | Ubiquitination | RDRFLELFYMYDDDG HHHHHHEEEEECCCC | 2.11 | 22817900 | |
500 | Ubiquitination | TSCCRCFCVECLEVL CCCCCCHHHHHHHHH | 2.63 | 22817900 | |
501 | Ubiquitination | SCCRCFCVECLEVLV CCCCCHHHHHHHHHH | 2.66 | 29967540 | |
512 | Ubiquitination | EVLVGTGTAAEAKLQ HHHHCCCCHHHHHCC | 23.64 | 22817900 | |
521 | Ubiquitination | AEAKLQEPWSCYMCL HHHHCCCCCEEEEEC | 18.47 | 23000965 | |
527 | Ubiquitination | EPWSCYMCLPQRCHG CCCEEEEECCHHCHH | 1.71 | 23000965 | |
535 | Ubiquitination | LPQRCHGVLRRRKDW CCHHCHHHHHHCCCC | 1.35 | 29967540 | |
542 | Ubiquitination | VLRRRKDWNVRLQAF HHHHCCCCCEEEEEE | 14.30 | 22817900 | |
542 (in isoform 2) | Ubiquitination | - | 14.30 | 21906983 | |
542 (in isoform 3) | Ubiquitination | - | 14.30 | 21906983 | |
542 (in isoform 4) | Ubiquitination | - | 14.30 | 21906983 | |
542 (in isoform 5) | Ubiquitination | - | 14.30 | 21906983 | |
554 | Ubiquitination | QAFFTSDTGLEYEAP EEEEECCCCCCEECC | 43.35 | 22817900 | |
554 (in isoform 6) | Ubiquitination | - | 43.35 | 21906983 | |
555 | Ubiquitination | AFFTSDTGLEYEAPK EEEECCCCCCEECCC | 22.85 | 23000965 | |
561 | Ubiquitination | TGLEYEAPKLYPAIP CCCCEECCCHHCCCH | 18.42 | 23000965 | |
562 | Ubiquitination | GLEYEAPKLYPAIPA CCCEECCCHHCCCHH | 68.64 | 22817900 | |
562 (in isoform 1) | Ubiquitination | - | 68.64 | 21906983 | |
567 | Ubiquitination | APKLYPAIPAARRRP CCCHHCCCHHHHCCC | 1.74 | 23000965 | |
573 | Ubiquitination | AIPAARRRPIRVLSL CCHHHHCCCEEEEEC | 25.99 | 23000965 | |
577 | Ubiquitination | ARRRPIRVLSLFDGI HHCCCEEEEECCCCC | 4.39 | 29967540 | |
588 | Phosphorylation | FDGIATGYLVLKELG CCCCHHHHHHHHHHC | 6.84 | - | |
589 | Ubiquitination | DGIATGYLVLKELGI CCCHHHHHHHHHHCC | 3.73 | 29967540 | |
597 | Ubiquitination | VLKELGIKVGKYVAS HHHHHCCCHHHHHHH | 43.04 | 23000965 | |
603 | Ubiquitination | IKVGKYVASEVCEES CCHHHHHHHHHHHCC | 9.26 | 23000965 | |
603 (in isoform 2) | Ubiquitination | - | 9.26 | 21906983 | |
603 (in isoform 3) | Ubiquitination | - | 9.26 | 21906983 | |
603 (in isoform 4) | Ubiquitination | - | 9.26 | 21906983 | |
603 (in isoform 5) | Ubiquitination | - | 9.26 | 21906983 | |
609 | Ubiquitination | VASEVCEESIAVGTV HHHHHHHCCEEEEEE | 42.17 | 23000965 | |
615 | Ubiquitination | EESIAVGTVKHEGNI HCCEEEEEEEEECCE | 21.56 | 23000965 | |
615 (in isoform 6) | Ubiquitination | - | 21.56 | 21906983 | |
617 | Sumoylation | SIAVGTVKHEGNIKY CEEEEEEEEECCEEE | 35.46 | 28112733 | |
617 | Ubiquitination | SIAVGTVKHEGNIKY CEEEEEEEEECCEEE | 35.46 | 23000965 | |
623 | Ubiquitination | VKHEGNIKYVNDVRN EEEECCEEEEEECCH | 47.33 | 23000965 | |
623 (in isoform 1) | Ubiquitination | - | 47.33 | 21906983 | |
662 | Ubiquitination | SNVNPARKGLYEGTG CCCCCCCCCCCCCCC | 56.21 | - | |
676 | Phosphorylation | GRLFFEFYHLLNYSR CHHHHHHHHHHHCCC | 5.60 | 30108239 | |
681 | Phosphorylation | EFYHLLNYSRPKEGD HHHHHHHCCCCCCCC | 13.16 | 30108239 | |
682 | Phosphorylation | FYHLLNYSRPKEGDD HHHHHHCCCCCCCCC | 40.82 | 30108239 | |
710 (in isoform 8) | Phosphorylation | - | 3.55 | 24719451 | |
711 | Phosphorylation | VGDKRDISRFLECNP CCCHHHHHHHHCCCC | 22.67 | - | |
757 | Ubiquitination | KNDKLELQDCLEYNR CCCCCCHHHHHHHHH | 29.96 | 22817900 | |
757 (in isoform 2) | Ubiquitination | - | 29.96 | 21906983 | |
762 | Ubiquitination | ELQDCLEYNRIAKLK CHHHHHHHHHHHHHE | 9.22 | 22817900 | |
769 | Ubiquitination | YNRIAKLKKVQTITT HHHHHHHEECEEEEC | 50.63 | 22817900 | |
769 (in isoform 6) | Ubiquitination | - | 50.63 | 21906983 | |
773 | Phosphorylation | AKLKKVQTITTKSNS HHHEECEEEECCCCH | 24.23 | 21406692 | |
774 | Ubiquitination | KLKKVQTITTKSNSI HHEECEEEECCCCHH | 2.29 | 22817900 | |
775 | Phosphorylation | LKKVQTITTKSNSIK HEECEEEECCCCHHH | 31.40 | 21406692 | |
776 | Phosphorylation | KKVQTITTKSNSIKQ EECEEEECCCCHHHC | 28.73 | 21406692 | |
777 | Ubiquitination | KVQTITTKSNSIKQG ECEEEECCCCHHHCC | 38.70 | 22817900 | |
777 (in isoform 1) | Ubiquitination | - | 38.70 | 21906983 | |
780 | Phosphorylation | TITTKSNSIKQGKNQ EEECCCCHHHCCCCC | 37.95 | 24719451 | |
782 | Ubiquitination | TTKSNSIKQGKNQLF ECCCCHHHCCCCCEE | 53.47 | 22817900 | |
815 | Phosphorylation | IFGFPVHYTDVSNMG HHCCCCEECCHHHCC | 12.60 | 21406692 | |
816 | Phosphorylation | FGFPVHYTDVSNMGR HCCCCEECCHHHCCH | 18.29 | 21406692 | |
819 | Phosphorylation | PVHYTDVSNMGRGAR CCEECCHHHCCHHHH | 24.74 | 21406692 | |
823 | Methylation | TDVSNMGRGARQKLL CCHHHCCHHHHHHHH | 25.48 | - | |
826 | Methylation | SNMGRGARQKLLGRS HHCCHHHHHHHHCCC | 36.67 | - | |
835 | Phosphorylation | KLLGRSWSVPVIRHL HHHCCCCCHHHHHHH | 20.14 | 27251275 | |
847 | Ubiquitination | RHLFAPLKDYFACE- HHHHHHHHHHCCCC- | 49.69 | - |
Modified Location | Modified Residue | Modification | Type of Upstream Proteins | Gene Name of Upstream Proteins | UniProt AC of Upstream Proteins | Sources |
---|---|---|---|---|---|---|
Oops, there are no upstream regulatory protein records of DNM3B_HUMAN !! |
Modified Location | Modified Residue | Modification | Function | Reference | ||
---|---|---|---|---|---|---|
Oops, there are no descriptions of PTM sites of DNM3B_HUMAN !! |
* Distance = the distance between SAP position and PTM sites.
Modified Location | Modification | Variant Position (Distance <= 10) |
Residue Change | SAP | Related Disease | Reference |
---|---|---|---|---|---|---|
Oops, there are no SNP-PTM records of DNM3B_HUMAN !! |
Kegg Disease | ||||||
---|---|---|---|---|---|---|
There are no disease associations of PTM sites. | ||||||
OMIM Disease | ||||||
242860 | Immunodeficiency-centromeric instability-facial anomalies syndrome 1 (ICF1) | |||||
Kegg Drug | ||||||
There are no disease associations of PTM sites. | ||||||
DrugBank | ||||||
There are no disease associations of PTM sites. |
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