HMF1_YEAST - dbPTM
HMF1_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID HMF1_YEAST
UniProt AC P40037
Protein Name Protein HMF1
Gene Name HMF1
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 129
Subcellular Localization Cytoplasm. Nucleus. Mitochondrion intermembrane space .
Protein Description
Protein Sequence MVTTLTPVICESAPAAAASYSHAMKVNNLIFLSGQIPVTPDNKLVEGSIADKAEQVIQNIKNVLEASNSSLDRVVKVNIFLADINHFAEFNSVYAKYFNTHKPARSCVAVAALPLGVDMEMEAIAAERD
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure		 ASA (%) Reference Orthologous
Protein Cluster
3Phosphorylation-----MVTTLTPVIC
-----CCCCCCCEEE		18.1328889911
4Phosphorylation----MVTTLTPVICE
----CCCCCCCEEEC		19.7528889911
6Phosphorylation--MVTTLTPVICESA
--CCCCCCCEEECCC		17.2621082442
12PhosphorylationLTPVICESAPAAAAS
CCCEEECCCHHHHHH		34.8330377154
19PhosphorylationSAPAAAASYSHAMKV
CCHHHHHHCCHHHHC		23.5730377154
20PhosphorylationAPAAAASYSHAMKVN
CHHHHHHCCHHHHCC		10.3528132839
21PhosphorylationPAAAASYSHAMKVNN
HHHHHHCCHHHHCCC		11.4130377154
52UbiquitinationVEGSIADKAEQVIQN
CCCCHHHHHHHHHHH		44.8123749301
52AcetylationVEGSIADKAEQVIQN
CCCCHHHHHHHHHHH		44.8124489116
61UbiquitinationEQVIQNIKNVLEASN
HHHHHHHHHHHHHCC		48.8624961812
61AcetylationEQVIQNIKNVLEASN
HHHHHHHHHHHHHCC		48.8624489116
102UbiquitinationAKYFNTHKPARSCVA
HHHHCCCCCHHHEEE		38.0323749301
102AcetylationAKYFNTHKPARSCVA
HHHHCCCCCHHHEEE		38.0322865919
Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of HMF1_YEAST !!
Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of HMF1_YEAST !!
Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10) 		Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of HMF1_YEAST !!
Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
RPA34_YEASTRPA34physical
18467557
RU2A_YEASTLEA1genetic
27708008
KPYK1_YEASTCDC19genetic
27708008
CALM_YEASTCMD1genetic
27708008
MAK5_YEASTMAK5genetic
27708008
DBF4_YEASTDBF4genetic
27708008
LCB2_YEASTLCB2genetic
27708008
CDC37_YEASTCDC37genetic
27708008
TFB1_YEASTTFB1genetic
27708008
PSF2_YEASTPSF2genetic
27708008
CDC11_YEASTCDC11genetic
27708008
MED14_YEASTRGR1genetic
27708008
NEP1_YEASTEMG1genetic
27708008
SMC6_YEASTSMC6genetic
27708008
BET5_YEASTBET5genetic
27708008
UTP15_YEASTUTP15genetic
27708008
CBF3B_YEASTCEP3genetic
27708008
AIM3_YEASTAIM3genetic
27708008
RS6A_YEASTRPS6Bgenetic
27708008
RS6B_YEASTRPS6Bgenetic
27708008
STE50_YEASTSTE50genetic
27708008
MTU1_YEASTSLM3genetic
27708008
YD056_YEASTYDR056Cgenetic
27708008
FMP16_YEASTFMP16genetic
27708008
SAC7_YEASTSAC7genetic
27708008
SNF6_YEASTSNF6genetic
27708008
ACA2_YEASTCST6genetic
27708008
YIQ5_YEASTYIL165Cgenetic
27708008
DHOM_YEASTHOM6genetic
27708008
SRL3_YEASTSRL3genetic
27708008
Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of HMF1_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-3, AND MASSSPECTROMETRY.

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