YL419_YEAST - dbPTM
YL419_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID YL419_YEAST
UniProt AC Q06698
Protein Name Putative ATP-dependent RNA helicase YLR419W
Gene Name YLR419W
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 1435
Subcellular Localization Cytoplasm .
Protein Description Probable ATP-binding RNA helicase..
Protein Sequence MAKKTKNNSKSSTPVNDVPTTAGKKKAKGKKGQEPEPEDDKRAKQQSNRAKVTSTASWTGKLPHTILHETCQKRKWNKVEYDMKKIGDKGFIAIAVLSFTDPKTKETLTARMNDPTYDKASGKGLVIPQETPIEARHMASTIALYRIAYNTNLHMMLPPNHRKTWYALDDFRKDNLKTDEKRINKLFDLDPFKTMVEDRKLKAQREKEQVAQNNQAQKEQVARTILSSHGGISSSGKDRQERKVASHKNSHNPSLVRFPKKVWENSIFVDLDESSRQLIETSLKEKIDWQAKKISHKNETIAENREDLKAKLLTLQFRPKHVEEAMLYKDPLSFLLFNLPEDDLPPFFHKKKGDTKNKVEITNLPLSTRMIVERLTEIGVSSDEALLALQQNDMNENEAAGFLTREILPTLNSNTNEPVSETESIECWNQELESLESIYEGCVMDAKEDSHYTLNLIEKLKIKLKVYRTKNYPASLPGIVVSTFDKNYKLPDYIKKQILTRLLHYLQEGNLIGDMLVYHIYEWLKENISKIIDNPGPLIPDSDSKGAINKRNISNGKRSINNSSSRKFTKTTISEDTLSVLREEYTKRIKSSEYKSMQLVREQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQKEKGDFGKTKIVCTQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGVLVRLLQNARTMLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLFKKFFPGLATCHIEGRTFPITDYFLEDILSDLDFKIKREKALSYDDDSVDERNNDDQYLKPRADSKFFTSGQINYDLLCQVVEYVHKRLKAANDNGSIIVFLPGVGEINKCCNLLANKSNEADFMVLPLHSALTPEDQKRVFKKYHGKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIKDVKAFLSTALDAPPLPALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLVSILGIGVLPFIGGFENREKIKKLLCKYESRGDLFAVLEIVRDYFKIKDSSIKRKYLRDNLLSYNKINEIKSSTAQYYSILKDVGFLPMDYKVGSISDLNRNERNFDILRAILTGAFYPHIARVQLPDVKYLSTSSGAVEKDPEAKMIKYWIRSEEYQDKLEEYKTKISQETQKVDLEDLPLPATRAFIHPSSVLFSTNSVNLEDAKLLSEVDGPISRQSKIPTVVKYPFVLFTTSQVTNKLYLRDLTPTTTLSLLLFGGAISYDIGGTIHSPGIVVDNWLPIRTWCKNGVLIKELRTQLDEAIRKKLESPDYAKKSQIDNSGADKTLKIVEKIIASEQ
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure		 ASA (%) Reference Orthologous
Protein Cluster
5Phosphorylation---MAKKTKNNSKSS
---CCCCCCCCCCCC		37.9919779198
9PhosphorylationAKKTKNNSKSSTPVN
CCCCCCCCCCCCCCC		43.2221082442
11PhosphorylationKTKNNSKSSTPVNDV
CCCCCCCCCCCCCCC		38.9922369663
12PhosphorylationTKNNSKSSTPVNDVP
CCCCCCCCCCCCCCC		40.2320377248
13PhosphorylationKNNSKSSTPVNDVPT
CCCCCCCCCCCCCCC		38.0422369663
20PhosphorylationTPVNDVPTTAGKKKA
CCCCCCCCCCCHHCC		29.1828889911
21PhosphorylationPVNDVPTTAGKKKAK
CCCCCCCCCCHHCCC		27.6119779198
55PhosphorylationNRAKVTSTASWTGKL
HCCCCCCCHHCCCCC		18.4928889911
57PhosphorylationAKVTSTASWTGKLPH
CCCCCCHHCCCCCCH		25.8428889911
59PhosphorylationVTSTASWTGKLPHTI
CCCCHHCCCCCCHHH		23.1928889911
70PhosphorylationPHTILHETCQKRKWN
CHHHHHHHHHHCCCC		14.9721551504
119UbiquitinationMNDPTYDKASGKGLV
CCCCCCCCCCCCCEE		33.7623749301
362PhosphorylationTKNKVEITNLPLSTR
CCCCEEEECCCCCHH		19.7328132839
559PhosphorylationNISNGKRSINNSSSR
CCCCCCCCCCCCCCC		32.9028889911
563PhosphorylationGKRSINNSSSRKFTK
CCCCCCCCCCCCCEE		25.7928132839
564PhosphorylationKRSINNSSSRKFTKT
CCCCCCCCCCCCEEC		35.9628132839
565PhosphorylationRSINNSSSRKFTKTT
CCCCCCCCCCCEECE		39.0328889911
585PhosphorylationLSVLREEYTKRIKSS
HHHHHHHHHHHHHCC		16.8928889911
591PhosphorylationEYTKRIKSSEYKSMQ
HHHHHHHCCHHHHHH		26.4828889911
592PhosphorylationYTKRIKSSEYKSMQL
HHHHHHCCHHHHHHH		39.6928889911
688PhosphorylationTCGEEVGYVIRGVNK
CCCCCCCEEEECCCC		9.6228889911
811PhosphorylationIKREKALSYDDDSVD
HCHHHCCCCCCCCCC		31.2329136822
812PhosphorylationKREKALSYDDDSVDE
CHHHCCCCCCCCCCC		25.0029136822
816PhosphorylationALSYDDDSVDERNND
CCCCCCCCCCCCCCC		38.1621551504
984PhosphorylationRVREGLSYKLFSKNL
HHHCHHHHHCCCCCC		19.4327017623
1227PhosphorylationVQLPDVKYLSTSSGA
CCCCCCCEEECCCCC		13.0128889911
1230PhosphorylationPDVKYLSTSSGAVEK
CCCCEEECCCCCCCC		25.0728889911
1306PhosphorylationLEDAKLLSEVDGPIS
HHHHHHHHHCCCCCC		46.1125521595
1316PhosphorylationDGPISRQSKIPTVVK
CCCCCCCCCCCCEEE		31.2921126336
1320PhosphorylationSRQSKIPTVVKYPFV
CCCCCCCCEEECCEE		41.2125533186
1335PhosphorylationLFTTSQVTNKLYLRD
EEEHHHCCCCEECCC		20.9925533186
1339PhosphorylationSQVTNKLYLRDLTPT
HHCCCCEECCCCCCC		10.9925533186
Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of YL419_YEAST !!
Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of YL419_YEAST !!
Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10) 		Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of YL419_YEAST !!
Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
IPK1_YEASTIPK1genetic
21987634
CTK1_YEASTCTK1genetic
21987634
APC11_YEASTAPC11genetic
27708008
ATG8_YEASTATG8genetic
27708008
MTU1_YEASTSLM3genetic
27708008
S2538_YEASTYDL119Cgenetic
27708008
MNN10_YEASTMNN10genetic
27708008
ATC1_YEASTPMR1genetic
27708008
ATG1_YEASTATG1genetic
27708008
QCR9_YEASTQCR9genetic
27708008
PHB2_YEASTPHB2genetic
27708008
IRE1_YEASTIRE1genetic
27708008
ACA2_YEASTCST6genetic
27708008
FLX1_YEASTFLX1genetic
27708008
MGA2_YEASTMGA2genetic
27708008
PHO86_YEASTPHO86genetic
27708008
RL14A_YEASTRPL14Agenetic
27708008
MDM35_YEASTMDM35genetic
27708008
PAM17_YEASTPAM17genetic
27708008
RT109_YEASTRTT109genetic
27708008
BPT1_YEASTBPT1genetic
27708008
COX12_YEASTCOX12genetic
27708008
LIPB_YEASTLIP2genetic
27708008
PFD4_YEASTGIM3genetic
27708008
COQ2_YEASTCOQ2genetic
27708008
SIN3_YEASTSIN3genetic
27708008
TOP1_YEASTTOP1genetic
27708008
COQ10_YEASTCOQ10genetic
27708008
CY1_YEASTCYT1genetic
27708008
MNE1_YEASTMNE1genetic
27708008
RU2A_YEASTLEA1genetic
27708008
YP247_YEASTYPL247Cgenetic
27708008
MRL1_YEASTMRL1genetic
27708008
Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of YL419_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-13 AND SER-816, AND MASSSPECTROMETRY.

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