YM8V_YEAST - dbPTM
YM8V_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID YM8V_YEAST
UniProt AC Q03559
Protein Name Uncharacterized protein YMR295C
Gene Name YMR295C
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 197
Subcellular Localization
Protein Description
Protein Sequence MMHFRKKSSISNTSDHDGANRASDVKISEDDKARLKMRTASVADPILDAVQEAQPFEQAADTFHDNMNRQSYFSNEEGHVLCDVFGQPITQADISNPTRARDERPLDTIRSFEYAVSGDPVWAQQLETPTYGFRVRPDFPVFGAAVTYDANGMPQQVGGASSQMYGEQAVYQPQQHVQTEEKQKKKKKGLFGRMKKK
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure		 ASA (%) Reference Orthologous
Protein Cluster
7Ubiquitination-MMHFRKKSSISNTS
-CCCCCCCCCCCCCC		45.2223749301
8PhosphorylationMMHFRKKSSISNTSD
CCCCCCCCCCCCCCC		35.6222369663
9PhosphorylationMHFRKKSSISNTSDH
CCCCCCCCCCCCCCC		38.6322369663
11PhosphorylationFRKKSSISNTSDHDG
CCCCCCCCCCCCCCC		35.6822369663
13PhosphorylationKKSSISNTSDHDGAN
CCCCCCCCCCCCCCC		28.8322369663
14PhosphorylationKSSISNTSDHDGANR
CCCCCCCCCCCCCCC		36.8822369663
23PhosphorylationHDGANRASDVKISED
CCCCCCHHCCCCCHH		39.4322369663
26UbiquitinationANRASDVKISEDDKA
CCCHHCCCCCHHHHH		45.5723749301
28PhosphorylationRASDVKISEDDKARL
CHHCCCCCHHHHHHH		29.2921440633
32AcetylationVKISEDDKARLKMRT
CCCCHHHHHHHHHHH		47.9624489116
32UbiquitinationVKISEDDKARLKMRT
CCCCHHHHHHHHHHH		47.9623749301
36UbiquitinationEDDKARLKMRTASVA
HHHHHHHHHHHHHHH		22.3022817900
39PhosphorylationKARLKMRTASVADPI
HHHHHHHHHHHHHHH		21.5622369663
41PhosphorylationRLKMRTASVADPILD
HHHHHHHHHHHHHHH		19.7522369663
62PhosphorylationPFEQAADTFHDNMNR
CHHHHHHHHHHHCCH		20.3828132839
71PhosphorylationHDNMNRQSYFSNEEG
HHHCCHHHHHCCCCC		25.5522369663
72PhosphorylationDNMNRQSYFSNEEGH
HHCCHHHHHCCCCCC		11.5922369663
74PhosphorylationMNRQSYFSNEEGHVL
CCHHHHHCCCCCCEE		34.7922369663
90PhosphorylationDVFGQPITQADISNP
ECCCCCCCCCCCCCC		25.1222369663
95PhosphorylationPITQADISNPTRARD
CCCCCCCCCCCCCCC		36.9922369663
98PhosphorylationQADISNPTRARDERP
CCCCCCCCCCCCCCC		41.0122369663
161PhosphorylationPQQVGGASSQMYGEQ
CCCCCCCHHHHHHHH		25.1128889911
162PhosphorylationQQVGGASSQMYGEQA
CCCCCCHHHHHHHHH		20.5921082442
165PhosphorylationGGASSQMYGEQAVYQ
CCCHHHHHHHHHHHC		15.1821082442
182UbiquitinationQHVQTEEKQKKKKKG
HHCCCHHHHHHHHCC		62.2722106047
Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of YM8V_YEAST !!
Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of YM8V_YEAST !!
Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10) 		Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of YM8V_YEAST !!
Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
TFB1_YEASTTFB1genetic
27708008
RPN7_YEASTRPN7genetic
27708008
YG1X_YEASTYGR050Cgenetic
27708008
CTK1_YEASTCTK1genetic
27708008
CKS1_YEASTCKS1genetic
27708008
UAP1_YEASTQRI1genetic
27708008
GPI19_YEASTGPI19genetic
27708008
ACT_YEASTACT1genetic
27708008
STT3_YEASTSTT3genetic
27708008
SYV_YEASTVAS1genetic
27708008
SEC24_YEASTSEC24genetic
27708008
TIM16_YEASTPAM16genetic
27708008
CDC11_YEASTCDC11genetic
27708008
PRP19_YEASTPRP19genetic
27708008
MED14_YEASTRGR1genetic
27708008
ERG27_YEASTERG27genetic
27708008
NEP1_YEASTEMG1genetic
27708008
CDC91_YEASTGAB1genetic
27708008
LST8_YEASTLST8genetic
27708008
SMC5_YEASTSMC5genetic
27708008
SEC63_YEASTSEC63genetic
27708008
GPI2_YEASTGPI2genetic
27708008
SHG1_YEASTSHG1genetic
27708008
SLX5_YEASTSLX5genetic
27708008
RM01_YEASTMRPL1genetic
27708008
TFS2_YEASTDST1genetic
27708008
SDS3_YEASTSDS3genetic
27708008
BFA1_YEASTBFA1genetic
27708008
ILM1_YEASTILM1genetic
27708008
YJ90_YEASTYJR120Wgenetic
27708008
SRL3_YEASTSRL3genetic
27708008
UPS2_YEASTUPS2genetic
27708008
ELO3_YEASTELO3genetic
27708008
RL6B_YEASTRPL6Bgenetic
27708008
ATP18_YEASTATP18genetic
27708008
PET8_YEASTPET8genetic
27708008
PHO23_YEASTPHO23genetic
27708008
SIN3_YEASTSIN3genetic
27708008
DGK1_YEASTDGK1genetic
27708008
NEW1_YEASTNEW1genetic
27708008
ATPN_YEASTATP20genetic
27708008
SRO7_YEASTSRO7genetic
27708008
Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of YM8V_YEAST

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"A multidimensional chromatography technology for in-depthphosphoproteome analysis.";
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
Mol. Cell. Proteomics 7:1389-1396(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-11; THR-13 AND SER-14,AND MASS SPECTROMETRY.
"Proteome-wide identification of in vivo targets of DNA damagecheckpoint kinases.";
Smolka M.B., Albuquerque C.P., Chen S.H., Zhou H.;
Proc. Natl. Acad. Sci. U.S.A. 104:10364-10369(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-14 AND SER-74, AND MASSSPECTROMETRY.
"Analysis of phosphorylation sites on proteins from Saccharomycescerevisiae by electron transfer dissociation (ETD) massspectrometry.";
Chi A., Huttenhower C., Geer L.Y., Coon J.J., Syka J.E.P., Bai D.L.,Shabanowitz J., Burke D.J., Troyanskaya O.G., Hunt D.F.;
Proc. Natl. Acad. Sci. U.S.A. 104:2193-2198(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-8; SER-9; SER-11;THR-13; SER-14 AND SER-23, AND MASS SPECTROMETRY.
"Quantitative phosphoproteomics applied to the yeast pheromonesignaling pathway.";
Gruhler A., Olsen J.V., Mohammed S., Mortensen P., Faergeman N.J.,Mann M., Jensen O.N.;
Mol. Cell. Proteomics 4:310-327(2005).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-74, AND MASSSPECTROMETRY.
"Phosphoproteome analysis by mass spectrometry and its application toSaccharomyces cerevisiae.";
Ficarro S.B., McCleland M.L., Stukenberg P.T., Burke D.J., Ross M.M.,Shabanowitz J., Hunt D.F., White F.M.;
Nat. Biotechnol. 20:301-305(2002).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-11 AND SER-14, AND MASSSPECTROMETRY.
Ubiquitylation
ReferencePubMed
"A proteomics approach to understanding protein ubiquitination.";
Peng J., Schwartz D., Elias J.E., Thoreen C.C., Cheng D.,Marsischky G., Roelofs J., Finley D., Gygi S.P.;
Nat. Biotechnol. 21:921-926(2003).
Cited for: UBIQUITINATION [LARGE SCALE ANALYSIS] AT LYS-26 AND LYS-32, AND MASSSPECTROMETRY.

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