DPB_ARATH - dbPTM
DPB_ARATH - PTM Information in dbPTM
Basic Information of Protein
UniProt ID DPB_ARATH
UniProt AC Q9FNY2
Protein Name Transcription factor-like protein DPB
Gene Name DPB
Organism Arabidopsis thaliana (Mouse-ear cress).
Sequence Length 385
Subcellular Localization Nucleus . Cytoplasm .
Protein Description Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. The complex DPB/E2FC restricts cell division and lateral root initiation and may function as a negative regulator of E2F-regulated genes. The interaction with SKP2A is controlled by auxin..
Protein Sequence MTTTGSNSNHNHHESNNNNNNPSTRSWGTAVSGQSVSTSGSMGSPSSRSEQTITVVTSTSDTTFQRLNNLDIQGDDAGSQGASGVKKKKRGQRAAGPDKTGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFALPNNDGTSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWRGLPRTSLSDIEELKNERLSLRNRIEKKTAYSQELEEQYVGLQNLIQRNEHLYSSGNAPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNFVLKTMKFCDQPPQQPNGRNNSQLVCHNFTPENPNKGPSTGPTPQLDMYETHLQSQQHQQHSQLQIIPMPETNNVTSSADTAPVKSPSLPGIMNSSMKPEN
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure		 ASA (%) Reference Orthologous
Protein Cluster
44PhosphorylationSTSGSMGSPSSRSEQ
CCCCCCCCCCCCCCC		16.9927531888
79PhosphorylationIQGDDAGSQGASGVK
CCCCCCCCCCCHHCC		27.4530291188
83PhosphorylationDAGSQGASGVKKKKR
CCCCCCCHHCCCCCC		51.4430407730
370PhosphorylationADTAPVKSPSLPGIM
CCCCCCCCCCCCCCC		21.6928011693
372PhosphorylationTAPVKSPSLPGIMNS
CCCCCCCCCCCCCCC		55.0428011693
Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of DPB_ARATH !!
Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of DPB_ARATH !!
Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10) 		Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of DPB_ARATH !!
Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
E2FA_ARATHE2F3physical
11867638
E2FC_ARATHATE2F2physical
16920782
SKP2A_ARATHSKP2Aphysical
16920782
CCA22_ARATHCYC3Bphysical
20407024
CDKA1_ARATHCDC2physical
20407024
CDKF1_ARATHCAK1ATphysical
20407024
CKS1_ARATHCKS1physical
20407024
CCB23_ARATHCYCB2;3physical
20407024
MCMBP_ARATHETG1physical
20407024
E2FB_ARATHE2F1physical
20407024
E2FC_ARATHATE2F2physical
20407024
E2FB_ARATHE2F1physical
20706207
RBR1_ARATHRBR1physical
20706207
AB2E_ARATHRLI2physical
20706207
PSMD6_ARATHAT4G24820physical
20706207
NRPBB_ARATHNRPB11physical
20706207
MTNA_ARATHAT2G05830physical
20706207
EIF3H_ARATHTIF3H1physical
20706207
GUN9_ARATHCEL3physical
20706207
AB1E_ARATHRLI1physical
20706207
SKP2A_ARATHSKP2Aphysical
21139066
E2FA_ARATHE2F3physical
11108847
E2FB_ARATHE2F1physical
11108847
E2FC_ARATHATE2F2physical
11891240
Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of DPB_ARATH

loading...

Related Literatures of Post-Translational Modification

TOP
© 2024 Institute of Bioinformatics and Systems Biology, NYCU | Designed by : BiOmics Laboratory