dbPTM

TRM13_SCHPO - PTM Information in dbPTM

Basic Information of Protein

Overview of Protein Modification Sites with Functional and Structural Information
UniProt ID	TRM13_SCHPO
UniProt AC	Q9UTH1
Protein Name	tRNA:m(4)X modification enzyme TRM13
Gene Name	trm13
Organism	Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
Sequence Length	368
Subcellular Localization	Cytoplasm . Nucleus, nucleolus .
Protein Description	tRNA methylase which 2'-O-methylates cytidine(4) in tRNA(Pro) and tRNA(Gly)(GCC), and adenosine(4) in tRNA(His)..
Protein Sequence	MARIKKIFTQEELKQIPCPYDHKHTIVRHRLEYHLKRCNARPVERTDPYYKKDINISTSTDASESSSFEIVDLSKEELSKWICLFNRISDSLPTPQKKVLFHPAMNARLEEGTKKKHAIQQASLLGHMEKLHYFDNQGSIYYEFGAGRAELSRYVQHCSQQENVYILIDRDSNRTKHDSRILKDSIKNNWPEPKIIRCKIDIKDLKLDFFASEFRNSGKPVFAYSKHLCGAATDLTLNCLKSSPPNALVIALCCHHHCRWRTLSTFAREQLSHWGISNPQEFQILRQMTGWAVNSLREHMHASGGADSHISGLSHEERVKIGLKCKHIINYMRKLECEKMGYESSLVYYVGEETTLENVALIAYKRIN

Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations	Modification	Substrate Peptides & Secondary Structure	ASA (%)	Reference	Orthologous Protein Cluster
Oops, there are no PTM records of TRM13_SCHPO !!

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)

Modified Location	Modified Residue	Modification	Type of Upstream Proteins	Gene Name of Upstream Proteins	UniProt AC of Upstream Proteins	Sources
Oops, there are no upstream regulatory protein records of TRM13_SCHPO !!

Functions of PTM Sites

Modified Location	Modified Residue	Modification	Function	Reference
Oops, there are no descriptions of PTM sites of TRM13_SCHPO !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location	Modification	Variant Position (Distance <= 10)	Residue Change	SAP	Related Disease	Reference
Oops, there are no SNP-PTM records of TRM13_SCHPO !!

Protein-Protein Interaction

Interacting Protein	Gene Name	Interaction Type	PPI Reference
CHP1_SCHPO	chp1	genetic	18818364
FFT3_SCHPO	fft3	genetic	18818364
ASE1_SCHPO	ase1	genetic	18818364
ABP1_SCHPO	cbp1	genetic	18818364
PLMT_SCHPO	cho1	genetic	18818364
DHSD_SCHPO	sdh4	genetic	18818364
DCR1_SCHPO	dcr1	genetic	18818364
AMO1_SCHPO	amo1	genetic	18818364
VPS71_SCHPO	vps71	genetic	18818364
TPP1_SCHPO	tpp1	genetic	22681890
SFT1_SCHPO	sft1	genetic	22681890
TCO89_SCHPO	tco89	genetic	22681890
AGM2_SCHPO	SPAC1296.01c	genetic	22681890
HENMT_SCHPO	SPBC336.05c	genetic	22681890
SPD1_SCHPO	spd1	genetic	22681890
YAC5_SCHPO	cph1	genetic	22681890
YF48_SCHPO	SPAC3H5.08c	genetic	22681890
YI32_SCHPO	SPAC1399.02	genetic	22681890
YE04_SCHPO	SPAC17H9.04c	genetic	22681890
ULP2_SCHPO	ulp2	genetic	22681890
YE08_SCHPO	SPAC17H9.08	genetic	22681890
E2AK2_SCHPO	hri2	genetic	22681890
GCN1_SCHPO	SPAC18G6.05c	genetic	22681890
HMT2_SCHPO	hmt2	genetic	22681890
GBB_SCHPO	git5	genetic	22681890
HIBCH_SCHPO	snr1	genetic	22681890
YE98_SCHPO	erp2	genetic	22681890
YIDH_SCHPO	SPAC227.17c	genetic	22681890
RM01_SCHPO	SPAC1610.02c	genetic	22681890
GLD1_SCHPO	gld1	genetic	22681890
IWR1_SCHPO	iwr1	genetic	22681890
TFS2_SCHPO	tfs1	genetic	22681890
MAK1_SCHPO	mak1	genetic	22681890
ASE1_SCHPO	ase1	genetic	22681890
COG6_SCHPO	cog6	physical	26771498

Drug and Disease Associations

Kegg Drug
DrugBank
There are no disease associations of PTM sites.

Regulatory Network of TRM13_SCHPO

Related Literatures of Post-Translational Modification