RPB3_SCHPO - dbPTM
RPB3_SCHPO - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RPB3_SCHPO
UniProt AC P37382
Protein Name DNA-directed RNA polymerase II subunit RPB3
Gene Name rpb3
Organism Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
Sequence Length 297
Subcellular Localization Nucleus.
Protein Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB3 is part of the core element with the central large cleft and the clamp element that moves to open and close the cleft (By similarity)..
Protein Sequence MDSETHITIRNISKNSVDFVLTNTSLAVANSLRRVVLAEIPTVAIDLVEINVNTSVMPDEFLAHRLGMIPLDSSNIDEPPPVGLEYTRNCDCDQYCPKCSVELFLNAKCTGEGTMEIYARDLVVSSNSSLGHPILADPKSRGPLICKLRKEQEISLRCIAKKGIAKEHAKWSPTSAVAFEYDPWNKLQHTDYWFENDADAEWPKSKNADWEEPPREGEPFNFQEEPRRFYMDVESVGSIPPNEIMVQGLRILQEKLAVLVRDLDEEQPTQLSANELNMEENAEMNWSPYQNGEENTW
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster

Oops, there are no PTM records of RPB3_SCHPO !!

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of RPB3_SCHPO !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RPB3_SCHPO !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RPB3_SCHPO !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
RPB11_SCHPOrpb11genetic
10503538
RPB11_SCHPOrpb11physical
9642054
RPAB5_SCHPOrpb10physical
9642054
RPB1_SCHPOrpb1physical
11839823
RPB2_SCHPOrpb2physical
11839823
RPB4_SCHPOrpb4physical
11839823
RPAB1_SCHPOrpb5physical
11839823
RPAB2_SCHPOrpb6physical
11839823
RPB7_SCHPOrpb7physical
11839823
RPAB3_SCHPOrpb8physical
11839823
RPB9_SCHPOrpb9physical
11839823
RPAB5_SCHPOrpb10physical
11839823
RPB11_SCHPOrpb11physical
11839823
RPAB4_SCHPOrpc10physical
11839823
FCP1_SCHPOfcp1physical
11839823
T2FB_SCHPOtfg2physical
11839823
RPB2_SCHPOrpb2physical
9738888
RPB1_SCHPOrpb1physical
10648788
RPB2_SCHPOrpb2physical
10648788
RPB4_SCHPOrpb4physical
10648788
RPAB1_SCHPOrpb5physical
10648788
RPAB2_SCHPOrpb6physical
10648788
RPB7_SCHPOrpb7physical
10648788
RPAB3_SCHPOrpb8physical
10648788
RPB9_SCHPOrpb9physical
10648788
RPAB5_SCHPOrpb10physical
10648788
RPB11_SCHPOrpb11physical
10648788
RPAB4_SCHPOrpc10physical
10648788
RPB2_SCHPOrpb2physical
10503538
RPAB1_SCHPOrpb5physical
10503538
RPAB2_SCHPOrpb6physical
10503538
RPB11_SCHPOrpb11physical
10503538
RPAB1_SCHPOrpb5physical
9548938
RPAB2_SCHPOrpb6physical
9548938
RPAB5_SCHPOrpb10physical
9548938
RPB11_SCHPOrpb11physical
9548938
RPAB4_SCHPOrpc10physical
9548938
RPAB3_SCHPOrpb8physical
9548938
RPB2_SCHPOrpb2physical
12552808
RPB1_SCHPOrpb1physical
9325316
RPB2_SCHPOrpb2physical
9325316
RPAB1_SCHPOrpb5physical
9325316
RPAB2_SCHPOrpb6physical
9325316
RPB7_SCHPOrpb7physical
9325316
RPAB3_SCHPOrpb8physical
9325316
RPB11_SCHPOrpb11physical
9325316
RPAB5_SCHPOrpb10physical
9325316
RPAB4_SCHPOrpc10physical
9325316
G3P1_SCHPOtdh1physical
15620689
FCP1_SCHPOfcp1physical
15620689
T2FB_SCHPOtfg2physical
15620689
TAF14_SCHPOtfg3physical
15620689
RPB1_SCHPOrpb1physical
11168400
RPB4_SCHPOrpb4physical
11168400
RPAB4_SCHPOrpc10physical
11168400
RPAB3_SCHPOrpb8physical
11168400
RPB9_SCHPOrpb9physical
11168400
RPB7_SCHPOrpb7physical
11168400
RPB11_SCHPOrpb11physical
11168400
RPB2_SCHPOrpb2physical
11168400
RPAB1_SCHPOrpb5physical
11168400
RPAB5_SCHPOrpb10physical
11168400

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RPB3_SCHPO

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Related Literatures of Post-Translational Modification

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