RAF1_MOUSE - dbPTM
RAF1_MOUSE - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RAF1_MOUSE
UniProt AC Q99N57
Protein Name RAF proto-oncogene serine/threonine-protein kinase
Gene Name Raf1
Organism Mus musculus (Mouse).
Sequence Length 648
Subcellular Localization Cytoplasm. Cell membrane. Mitochondrion. Nucleus . Colocalizes with RGS14 and BRAF in both the cytoplasm and membranes. Phosphorylation at Ser-259 impairs its membrane accumulation. Recruited to the cell membrane by the active Ras protein. Phosphoryl
Protein Description Serine/threonine-protein kinase that acts as a regulatory link between the membrane-associated Ras GTPases and the MAPK/ERK cascade, and this critical regulatory link functions as a switch determining cell fate decisions including proliferation, differentiation, apoptosis, survival and oncogenic transformation. RAF1 activation initiates a mitogen-activated protein kinase (MAPK) cascade that comprises a sequential phosphorylation of the dual-specific MAPK kinases (MAP2K1/MEK1 and MAP2K2/MEK2) and the extracellular signal-regulated kinases (MAPK3/ERK1 and MAPK1/ERK2). The phosphorylated form of RAF1 (on residues Ser-338 and Ser-339, by PAK1) phosphorylates BAD/Bcl2-antagonist of cell death at 'Ser-75'. Phosphorylates adenylyl cyclases: ADCY2, ADCY5 and ADCY6, resulting in their activation. Phosphorylates PPP1R12A resulting in inhibition of the phosphatase activity. Phosphorylates TNNT2/cardiac muscle troponin T. Can promote NF-kB activation and inhibit signal transducers involved in motility (ROCK2), apoptosis (MAP3K5/ASK1 and STK3/MST2), proliferation and angiogenesis (RB1). Can protect cells from apoptosis also by translocating to the mitochondria where it binds BCL2 and displaces BAD/Bcl2-antagonist of cell death. Plays a role in the oncogenic transformation of epithelial cells via repression of the TJ protein, occludin (OCLN) by inducing the up-regulation of a transcriptional repressor SNAI2/SLUG, which induces down-regulation of OCLN. Restricts caspase activation in response to selected stimuli, notably Fas stimulation, pathogen-mediated macrophage apoptosis, and erythroid differentiation (By similarity). Regulates Rho signaling and migration, and is required for normal wound healing..
Protein Sequence MEHIQGAWKTISNGFGLKDAVFDGSSCISPTIVQQFGYQRRASDDGKLTDSSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLQEHKGKKARLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLLFPNSTVGDSGVPAPPSFPMRRMRESVSRMPASSQHRYSTPHAFTFNTSSPSSEGSLSQRQRSTSTPNVHMVSTTLHVDSRMIEDAIRSHSESASPSALSSSPNNLSPTGWSQPKTPVPAQRERAPGSGTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQLQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDDNPFSFQSDVYSYGIVLYELMAGELPYAHINNRDQIIFMVGRGYASPDLSRLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINACTLTTSPRLPVF
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
12PhosphorylationQGAWKTISNGFGLKD
CCHHHHHHCCCCCCC
35.8129514104
25PhosphorylationKDAVFDGSSCISPTI
CCCEECCCCCCCHHH
24.7125619855
26PhosphorylationDAVFDGSSCISPTIV
CCEECCCCCCCHHHH
22.4725619855
29PhosphorylationFDGSSCISPTIVQQF
ECCCCCCCHHHHHHH
21.9627087446
31PhosphorylationGSSCISPTIVQQFGY
CCCCCCHHHHHHHCC
27.3025619855
38PhosphorylationTIVQQFGYQRRASDD
HHHHHHCCCCCCCCC
10.5123375375
43PhosphorylationFGYQRRASDDGKLTD
HCCCCCCCCCCCCCC
34.1311782426
49PhosphorylationASDDGKLTDSSKTSN
CCCCCCCCCCCCCCC
37.0028833060
51PhosphorylationDDGKLTDSSKTSNTI
CCCCCCCCCCCCCEE
28.6228833060
52PhosphorylationDGKLTDSSKTSNTIR
CCCCCCCCCCCCEEE
42.6428833060
57PhosphorylationDSSKTSNTIRVFLPN
CCCCCCCEEEEECCC
15.2121454597
65UbiquitinationIRVFLPNKQRTVVNV
EEEECCCCCCEEEEC
38.94-
68PhosphorylationFLPNKQRTVVNVRNG
ECCCCCCEEEECCCC
26.7229514104
220PhosphorylationPMRRMRESVSRMPAS
CHHHHHHHHHCCCCC
18.2825338131
227PhosphorylationSVSRMPASSQHRYST
HHHCCCCCCCCCCCC
25.3526643407
228PhosphorylationVSRMPASSQHRYSTP
HHCCCCCCCCCCCCC
31.9226643407
232PhosphorylationPASSQHRYSTPHAFT
CCCCCCCCCCCCEEE
18.1228833060
233PhosphorylationASSQHRYSTPHAFTF
CCCCCCCCCCCEEEE
35.1011997508
234PhosphorylationSSQHRYSTPHAFTFN
CCCCCCCCCCEEEEE
15.3421082442
239PhosphorylationYSTPHAFTFNTSSPS
CCCCCEEEEECCCCC
19.4328833060
242PhosphorylationPHAFTFNTSSPSSEG
CCEEEEECCCCCCCC
26.7928833060
243PhosphorylationHAFTFNTSSPSSEGS
CEEEEECCCCCCCCC
41.1628833060
244PhosphorylationAFTFNTSSPSSEGSL
EEEEECCCCCCCCCC
27.1128833060
246PhosphorylationTFNTSSPSSEGSLSQ
EEECCCCCCCCCCCH
42.8628833060
247PhosphorylationFNTSSPSSEGSLSQR
EECCCCCCCCCCCHH
49.7328833060
250PhosphorylationSSPSSEGSLSQRQRS
CCCCCCCCCCHHHHC
22.3128833060
252PhosphorylationPSSEGSLSQRQRSTS
CCCCCCCCHHHHCCC
25.6423984901
257PhosphorylationSLSQRQRSTSTPNVH
CCCHHHHCCCCCCEE
20.5527742792
258PhosphorylationLSQRQRSTSTPNVHM
CCHHHHCCCCCCEEE
38.5227742792
259PhosphorylationSQRQRSTSTPNVHMV
CHHHHCCCCCCEEEE
43.0111782426
260PhosphorylationQRQRSTSTPNVHMVS
HHHHCCCCCCEEEEE
20.9727742792
267PhosphorylationTPNVHMVSTTLHVDS
CCCEEEEEEEEECCH
14.2228833060
268PhosphorylationPNVHMVSTTLHVDSR
CCEEEEEEEEECCHH
23.2028833060
269PhosphorylationNVHMVSTTLHVDSRM
CEEEEEEEEECCHHH
13.8328833060
274PhosphorylationSTTLHVDSRMIEDAI
EEEEECCHHHHHHHH
23.7428833060
283PhosphorylationMIEDAIRSHSESASP
HHHHHHHHCCCCCCH
25.8327087446
285 (in isoform 2)Phosphorylation-34.2023737553
285PhosphorylationEDAIRSHSESASPSA
HHHHHHCCCCCCHHH
34.2026643407
287PhosphorylationAIRSHSESASPSALS
HHHHCCCCCCHHHHC
36.7426643407
289PhosphorylationRSHSESASPSALSSS
HHCCCCCCHHHHCCC
28.7727087446
291PhosphorylationHSESASPSALSSSPN
CCCCCCHHHHCCCCC
39.0727087446
294PhosphorylationSASPSALSSSPNNLS
CCCHHHHCCCCCCCC
28.6127087446
295PhosphorylationASPSALSSSPNNLSP
CCHHHHCCCCCCCCC
51.1427087446
296PhosphorylationSPSALSSSPNNLSPT
CHHHHCCCCCCCCCC
28.4227087446
301PhosphorylationSSSPNNLSPTGWSQP
CCCCCCCCCCCCCCC
23.6527087446
303PhosphorylationSPNNLSPTGWSQPKT
CCCCCCCCCCCCCCC
48.1625168779
306PhosphorylationNLSPTGWSQPKTPVP
CCCCCCCCCCCCCCC
37.6422942356
309 (in isoform 2)Phosphorylation-58.8025266776
310PhosphorylationTGWSQPKTPVPAQRE
CCCCCCCCCCCCCCC
35.8823684622
338PhosphorylationRPRGQRDSSYYWEIE
CCCCCCCCCEEEEEE
23.5611782426
339PhosphorylationPRGQRDSSYYWEIEA
CCCCCCCCEEEEEEE
26.91-
340PhosphorylationRGQRDSSYYWEIEAS
CCCCCCCEEEEEEEE
19.2911296227
341PhosphorylationGQRDSSYYWEIEASE
CCCCCCEEEEEEEEE
9.8611296227
357PhosphorylationMLSTRIGSGSFGTVY
EEEEEECCCCCCCEE
28.9726745281
359PhosphorylationSTRIGSGSFGTVYKG
EEEECCCCCCCEECC
23.3828066266
362PhosphorylationIGSGSFGTVYKGKWH
ECCCCCCCEECCEEE
20.7428066266
471PhosphorylationIIHRDMKSNNIFLHE
CCCCCCCCCCEEEEC
28.59-
491PhosphorylationIGDFGLATVKSRWSG
ECCEEEEEECCCCCC
33.24-
494PhosphorylationFGLATVKSRWSGSQQ
EEEEEECCCCCCCCC
34.3526643407
497PhosphorylationATVKSRWSGSQQVEQ
EEECCCCCCCCCEEC
27.7026643407
499PhosphorylationVKSRWSGSQQVEQPT
ECCCCCCCCCEECCC
16.3625266776
506PhosphorylationSQQVEQPTGSVLWMA
CCCEECCCCCEEEEC
41.6120531401
508PhosphorylationQVEQPTGSVLWMAPE
CEECCCCCEEEECCE
19.2626643407
563MethylationQIIFMVGRGYASPDL
EEEEEECCCCCCCHH
24.44-
563Symmetric dimethylarginineQIIFMVGRGYASPDL
EEEEEECCCCCCCHH
24.44-
604PhosphorylationPLFPQILSSIELLQH
CCHHHHHHHHHHHHC
30.7926643407
605PhosphorylationLFPQILSSIELLQHS
CHHHHHHHHHHHHCC
19.3526643407
612PhosphorylationSIELLQHSLPKINRS
HHHHHHCCCCCCCCC
33.1529514104
619PhosphorylationSLPKINRSASEPSLH
CCCCCCCCCCCCCHH
31.4927742792
621PhosphorylationPKINRSASEPSLHRA
CCCCCCCCCCCHHHH
51.8126824392
624PhosphorylationNRSASEPSLHRAAHT
CCCCCCCCHHHHHCC
32.5320469934
631PhosphorylationSLHRAAHTEDINACT
CHHHHHCCCCCCCCC
30.5425619855
638PhosphorylationTEDINACTLTTSPRL
CCCCCCCCCCCCCCC
25.4025619855
640PhosphorylationDINACTLTTSPRLPV
CCCCCCCCCCCCCCC
13.6925619855
641PhosphorylationINACTLTTSPRLPVF
CCCCCCCCCCCCCCC
39.5925521595
642PhosphorylationNACTLTTSPRLPVF-
CCCCCCCCCCCCCC-
11.6426824392

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources
29SPhosphorylationKinaseMAPK1P63085
Uniprot
43SPhosphorylationKinasePKA-FAMILY-GPS
43SPhosphorylationKinasePKA-Uniprot
43SPhosphorylationKinaseMAPK1P63085
Uniprot
233SPhosphorylationKinasePRKACAP05132
GPS
233SPhosphorylationKinasePKA-FAMILY-GPS
233SPhosphorylationKinasePKA-Uniprot
259SPhosphorylationKinasePKA-Uniprot
259SPhosphorylationKinaseAKT1P31750
Uniprot
259SPhosphorylationKinasePKC-Uniprot
269TPhosphorylationKinasePKA-Uniprot
289SPhosphorylationKinaseMAPK1P63085
Uniprot
296SPhosphorylationKinaseMAPK1P63085
Uniprot
301SPhosphorylationKinaseMAPK1P63085
Uniprot
338SPhosphorylationKinaseMEK1Q02750
PSP
338SPhosphorylationKinasePAK1Q13153
PSP
338SPhosphorylationKinasePAK1O88643
Uniprot
338SPhosphorylationKinasePAK2Q8CIN4
Uniprot
338SPhosphorylationKinasePAK3Q61036
Uniprot
338SPhosphorylationKinasePAK5Q8C015
Uniprot
339SPhosphorylationKinasePAK2Q8CIN4
Uniprot
339SPhosphorylationKinasePAK3Q61036
Uniprot
339SPhosphorylationKinasePAK1O88643
Uniprot
340YPhosphorylationKinaseSRCP05480
Uniprot
341YPhosphorylationKinaseSRCP05480
Uniprot
341YPhosphorylationKinaseLYNP25911
PSP
497SPhosphorylationKinasePKC-Uniprot
499SPhosphorylationKinasePRKCAP20444
GPS
499SPhosphorylationKinasePKC-Uniprot
621SPhosphorylationKinaseRAF1Q99N57
PSP
642SPhosphorylationKinaseMAPK1P63085
Uniprot
-KUbiquitinationE3 ubiquitin ligaseStub1Q9WUD1
PMID:22199232

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference
29SPhosphorylation

15664191
43SPhosphorylation

15664191
259SPhosphorylation

15664191
259SPhosphorylation

15664191
269TPhosphorylation

-
289SMethylation

15664191
289SPhosphorylation

15664191
289SPhosphorylation

15664191
296SPhosphorylation

15664191
296SPhosphorylation

15664191
296SPhosphorylation

15664191
296SMethylation

15664191
296SMethylation

15664191
301SMethylation

15664191
301SMethylation

15664191
301SPhosphorylation

15664191
301SPhosphorylation

15664191
301SPhosphorylation

15664191
338SMethylation

15664191
338SPhosphorylation

15664191
338SPhosphorylation

15664191
338SPhosphorylation

15664191
338SPhosphorylation

15664191
338SPhosphorylation

15664191
338SMethylation

15664191
339SPhosphorylation

-
491TPhosphorylation

-
494SPhosphorylation

-
563RMethylation

-
621SMethylation

15664191
621SMethylation

15664191
621SPhosphorylation

15664191
621SPhosphorylation

15664191
621SPhosphorylation

15664191
642SPhosphorylation

15664191

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RAF1_MOUSE !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
RASH_MOUSEHrasphysical
16803888
MP2K1_MOUSEMap2k1physical
20956560
NEK10_MOUSENek10physical
20956560
BRAF_MOUSEBrafphysical
18332145
KSR1_MOUSEKsr1physical
18332145
BRAP_MOUSEBrapphysical
18332145
RFXK_MOUSERfxankphysical
10329666
RASH_MOUSEHrasphysical
16405865
ROCK2_MOUSERock2physical
16365167
RASH_MOUSEHrasphysical
17984326
VKIND_MOUSEKndc1physical
17984326
RABX5_MOUSERabgef1physical
15235600
RASH_MOUSEHrasphysical
15235600
RASH_MOUSEHrasphysical
24470255
PAXI_MOUSEPxnphysical
14636584
MP2K1_MOUSEMap2k1physical
14636584
MP2K1_MOUSEMap2k1physical
11435472
RASH_MOUSEHrasphysical
11435472
PEBP1_MOUSEPebp1physical
23055494
MP2K1_MOUSEMap2k1physical
23055494
RASH_MOUSEHrasphysical
28053233

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RAF1_MOUSE

loading...

Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"Solid tumor proteome and phosphoproteome analysis by high resolutionmass spectrometry.";
Zanivan S., Gnad F., Wickstroem S.A., Geiger T., Macek B., Cox J.,Faessler R., Mann M.;
J. Proteome Res. 7:5314-5326(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-621, AND MASSSPECTROMETRY.
"Regulation of Raf-1 by direct feedback phosphorylation.";
Dougherty M.K., Muller J., Ritt D.A., Zhou M., Zhou X.Z.,Copeland T.D., Conrads T.P., Veenstra T.D., Lu K.P., Morrison D.K.;
Mol. Cell 17:215-224(2005).
Cited for: PHOSPHORYLATION AT SER-29; SER-43; SER-259; SER-289; SER-296; SER-301;SER-338; SER-621 AND SER-642, ENZYME REGULATION, AND INTERACTION WITHPIN1; PPP2CA AND PPP2R1B.

TOP