| UniProt ID | RAF1_MOUSE | |
|---|---|---|
| UniProt AC | Q99N57 | |
| Protein Name | RAF proto-oncogene serine/threonine-protein kinase | |
| Gene Name | Raf1 | |
| Organism | Mus musculus (Mouse). | |
| Sequence Length | 648 | |
| Subcellular Localization | Cytoplasm. Cell membrane. Mitochondrion. Nucleus . Colocalizes with RGS14 and BRAF in both the cytoplasm and membranes. Phosphorylation at Ser-259 impairs its membrane accumulation. Recruited to the cell membrane by the active Ras protein. Phosphoryl | |
| Protein Description | Serine/threonine-protein kinase that acts as a regulatory link between the membrane-associated Ras GTPases and the MAPK/ERK cascade, and this critical regulatory link functions as a switch determining cell fate decisions including proliferation, differentiation, apoptosis, survival and oncogenic transformation. RAF1 activation initiates a mitogen-activated protein kinase (MAPK) cascade that comprises a sequential phosphorylation of the dual-specific MAPK kinases (MAP2K1/MEK1 and MAP2K2/MEK2) and the extracellular signal-regulated kinases (MAPK3/ERK1 and MAPK1/ERK2). The phosphorylated form of RAF1 (on residues Ser-338 and Ser-339, by PAK1) phosphorylates BAD/Bcl2-antagonist of cell death at 'Ser-75'. Phosphorylates adenylyl cyclases: ADCY2, ADCY5 and ADCY6, resulting in their activation. Phosphorylates PPP1R12A resulting in inhibition of the phosphatase activity. Phosphorylates TNNT2/cardiac muscle troponin T. Can promote NF-kB activation and inhibit signal transducers involved in motility (ROCK2), apoptosis (MAP3K5/ASK1 and STK3/MST2), proliferation and angiogenesis (RB1). Can protect cells from apoptosis also by translocating to the mitochondria where it binds BCL2 and displaces BAD/Bcl2-antagonist of cell death. Plays a role in the oncogenic transformation of epithelial cells via repression of the TJ protein, occludin (OCLN) by inducing the up-regulation of a transcriptional repressor SNAI2/SLUG, which induces down-regulation of OCLN. Restricts caspase activation in response to selected stimuli, notably Fas stimulation, pathogen-mediated macrophage apoptosis, and erythroid differentiation (By similarity). Regulates Rho signaling and migration, and is required for normal wound healing.. | |
| Protein Sequence | MEHIQGAWKTISNGFGLKDAVFDGSSCISPTIVQQFGYQRRASDDGKLTDSSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLQEHKGKKARLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLLFPNSTVGDSGVPAPPSFPMRRMRESVSRMPASSQHRYSTPHAFTFNTSSPSSEGSLSQRQRSTSTPNVHMVSTTLHVDSRMIEDAIRSHSESASPSALSSSPNNLSPTGWSQPKTPVPAQRERAPGSGTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQLQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDDNPFSFQSDVYSYGIVLYELMAGELPYAHINNRDQIIFMVGRGYASPDLSRLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINACTLTTSPRLPVF | |
| Overview of Protein Modification Sites with Functional and Structural Information | ||
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* ASA = Accessible Surface Area
| Locations | Modification | Substrate Peptides & Secondary Structure |
ASA (%) | Reference | Orthologous Protein Cluster |
|---|---|---|---|---|---|
| 12 | Phosphorylation | QGAWKTISNGFGLKD CCHHHHHHCCCCCCC | 35.81 | 29514104 | |
| 25 | Phosphorylation | KDAVFDGSSCISPTI CCCEECCCCCCCHHH | 24.71 | 25619855 | |
| 26 | Phosphorylation | DAVFDGSSCISPTIV CCEECCCCCCCHHHH | 22.47 | 25619855 | |
| 29 | Phosphorylation | FDGSSCISPTIVQQF ECCCCCCCHHHHHHH | 21.96 | 27087446 | |
| 31 | Phosphorylation | GSSCISPTIVQQFGY CCCCCCHHHHHHHCC | 27.30 | 25619855 | |
| 38 | Phosphorylation | TIVQQFGYQRRASDD HHHHHHCCCCCCCCC | 10.51 | 23375375 | |
| 43 | Phosphorylation | FGYQRRASDDGKLTD HCCCCCCCCCCCCCC | 34.13 | 11782426 | |
| 49 | Phosphorylation | ASDDGKLTDSSKTSN CCCCCCCCCCCCCCC | 37.00 | 28833060 | |
| 51 | Phosphorylation | DDGKLTDSSKTSNTI CCCCCCCCCCCCCEE | 28.62 | 28833060 | |
| 52 | Phosphorylation | DGKLTDSSKTSNTIR CCCCCCCCCCCCEEE | 42.64 | 28833060 | |
| 57 | Phosphorylation | DSSKTSNTIRVFLPN CCCCCCCEEEEECCC | 15.21 | 21454597 | |
| 65 | Ubiquitination | IRVFLPNKQRTVVNV EEEECCCCCCEEEEC | 38.94 | - | |
| 68 | Phosphorylation | FLPNKQRTVVNVRNG ECCCCCCEEEECCCC | 26.72 | 29514104 | |
| 220 | Phosphorylation | PMRRMRESVSRMPAS CHHHHHHHHHCCCCC | 18.28 | 25338131 | |
| 227 | Phosphorylation | SVSRMPASSQHRYST HHHCCCCCCCCCCCC | 25.35 | 26643407 | |
| 228 | Phosphorylation | VSRMPASSQHRYSTP HHCCCCCCCCCCCCC | 31.92 | 26643407 | |
| 232 | Phosphorylation | PASSQHRYSTPHAFT CCCCCCCCCCCCEEE | 18.12 | 28833060 | |
| 233 | Phosphorylation | ASSQHRYSTPHAFTF CCCCCCCCCCCEEEE | 35.10 | 11997508 | |
| 234 | Phosphorylation | SSQHRYSTPHAFTFN CCCCCCCCCCEEEEE | 15.34 | 21082442 | |
| 239 | Phosphorylation | YSTPHAFTFNTSSPS CCCCCEEEEECCCCC | 19.43 | 28833060 | |
| 242 | Phosphorylation | PHAFTFNTSSPSSEG CCEEEEECCCCCCCC | 26.79 | 28833060 | |
| 243 | Phosphorylation | HAFTFNTSSPSSEGS CEEEEECCCCCCCCC | 41.16 | 28833060 | |
| 244 | Phosphorylation | AFTFNTSSPSSEGSL EEEEECCCCCCCCCC | 27.11 | 28833060 | |
| 246 | Phosphorylation | TFNTSSPSSEGSLSQ EEECCCCCCCCCCCH | 42.86 | 28833060 | |
| 247 | Phosphorylation | FNTSSPSSEGSLSQR EECCCCCCCCCCCHH | 49.73 | 28833060 | |
| 250 | Phosphorylation | SSPSSEGSLSQRQRS CCCCCCCCCCHHHHC | 22.31 | 28833060 | |
| 252 | Phosphorylation | PSSEGSLSQRQRSTS CCCCCCCCHHHHCCC | 25.64 | 23984901 | |
| 257 | Phosphorylation | SLSQRQRSTSTPNVH CCCHHHHCCCCCCEE | 20.55 | 27742792 | |
| 258 | Phosphorylation | LSQRQRSTSTPNVHM CCHHHHCCCCCCEEE | 38.52 | 27742792 | |
| 259 | Phosphorylation | SQRQRSTSTPNVHMV CHHHHCCCCCCEEEE | 43.01 | 11782426 | |
| 260 | Phosphorylation | QRQRSTSTPNVHMVS HHHHCCCCCCEEEEE | 20.97 | 27742792 | |
| 267 | Phosphorylation | TPNVHMVSTTLHVDS CCCEEEEEEEEECCH | 14.22 | 28833060 | |
| 268 | Phosphorylation | PNVHMVSTTLHVDSR CCEEEEEEEEECCHH | 23.20 | 28833060 | |
| 269 | Phosphorylation | NVHMVSTTLHVDSRM CEEEEEEEEECCHHH | 13.83 | 28833060 | |
| 274 | Phosphorylation | STTLHVDSRMIEDAI EEEEECCHHHHHHHH | 23.74 | 28833060 | |
| 283 | Phosphorylation | MIEDAIRSHSESASP HHHHHHHHCCCCCCH | 25.83 | 27087446 | |
| 285 (in isoform 2) | Phosphorylation | - | 34.20 | 23737553 | |
| 285 | Phosphorylation | EDAIRSHSESASPSA HHHHHHCCCCCCHHH | 34.20 | 26643407 | |
| 287 | Phosphorylation | AIRSHSESASPSALS HHHHCCCCCCHHHHC | 36.74 | 26643407 | |
| 289 | Phosphorylation | RSHSESASPSALSSS HHCCCCCCHHHHCCC | 28.77 | 27087446 | |
| 291 | Phosphorylation | HSESASPSALSSSPN CCCCCCHHHHCCCCC | 39.07 | 27087446 | |
| 294 | Phosphorylation | SASPSALSSSPNNLS CCCHHHHCCCCCCCC | 28.61 | 27087446 | |
| 295 | Phosphorylation | ASPSALSSSPNNLSP CCHHHHCCCCCCCCC | 51.14 | 27087446 | |
| 296 | Phosphorylation | SPSALSSSPNNLSPT CHHHHCCCCCCCCCC | 28.42 | 27087446 | |
| 301 | Phosphorylation | SSSPNNLSPTGWSQP CCCCCCCCCCCCCCC | 23.65 | 27087446 | |
| 303 | Phosphorylation | SPNNLSPTGWSQPKT CCCCCCCCCCCCCCC | 48.16 | 25168779 | |
| 306 | Phosphorylation | NLSPTGWSQPKTPVP CCCCCCCCCCCCCCC | 37.64 | 22942356 | |
| 309 (in isoform 2) | Phosphorylation | - | 58.80 | 25266776 | |
| 310 | Phosphorylation | TGWSQPKTPVPAQRE CCCCCCCCCCCCCCC | 35.88 | 23684622 | |
| 338 | Phosphorylation | RPRGQRDSSYYWEIE CCCCCCCCCEEEEEE | 23.56 | 11782426 | |
| 339 | Phosphorylation | PRGQRDSSYYWEIEA CCCCCCCCEEEEEEE | 26.91 | - | |
| 340 | Phosphorylation | RGQRDSSYYWEIEAS CCCCCCCEEEEEEEE | 19.29 | 11296227 | |
| 341 | Phosphorylation | GQRDSSYYWEIEASE CCCCCCEEEEEEEEE | 9.86 | 11296227 | |
| 357 | Phosphorylation | MLSTRIGSGSFGTVY EEEEEECCCCCCCEE | 28.97 | 26745281 | |
| 359 | Phosphorylation | STRIGSGSFGTVYKG EEEECCCCCCCEECC | 23.38 | 28066266 | |
| 362 | Phosphorylation | IGSGSFGTVYKGKWH ECCCCCCCEECCEEE | 20.74 | 28066266 | |
| 471 | Phosphorylation | IIHRDMKSNNIFLHE CCCCCCCCCCEEEEC | 28.59 | - | |
| 491 | Phosphorylation | IGDFGLATVKSRWSG ECCEEEEEECCCCCC | 33.24 | - | |
| 494 | Phosphorylation | FGLATVKSRWSGSQQ EEEEEECCCCCCCCC | 34.35 | 26643407 | |
| 497 | Phosphorylation | ATVKSRWSGSQQVEQ EEECCCCCCCCCEEC | 27.70 | 26643407 | |
| 499 | Phosphorylation | VKSRWSGSQQVEQPT ECCCCCCCCCEECCC | 16.36 | 25266776 | |
| 506 | Phosphorylation | SQQVEQPTGSVLWMA CCCEECCCCCEEEEC | 41.61 | 20531401 | |
| 508 | Phosphorylation | QVEQPTGSVLWMAPE CEECCCCCEEEECCE | 19.26 | 26643407 | |
| 563 | Methylation | QIIFMVGRGYASPDL EEEEEECCCCCCCHH | 24.44 | - | |
| 563 | Symmetric dimethylarginine | QIIFMVGRGYASPDL EEEEEECCCCCCCHH | 24.44 | - | |
| 604 | Phosphorylation | PLFPQILSSIELLQH CCHHHHHHHHHHHHC | 30.79 | 26643407 | |
| 605 | Phosphorylation | LFPQILSSIELLQHS CHHHHHHHHHHHHCC | 19.35 | 26643407 | |
| 612 | Phosphorylation | SIELLQHSLPKINRS HHHHHHCCCCCCCCC | 33.15 | 29514104 | |
| 619 | Phosphorylation | SLPKINRSASEPSLH CCCCCCCCCCCCCHH | 31.49 | 27742792 | |
| 621 | Phosphorylation | PKINRSASEPSLHRA CCCCCCCCCCCHHHH | 51.81 | 26824392 | |
| 624 | Phosphorylation | NRSASEPSLHRAAHT CCCCCCCCHHHHHCC | 32.53 | 20469934 | |
| 631 | Phosphorylation | SLHRAAHTEDINACT CHHHHHCCCCCCCCC | 30.54 | 25619855 | |
| 638 | Phosphorylation | TEDINACTLTTSPRL CCCCCCCCCCCCCCC | 25.40 | 25619855 | |
| 640 | Phosphorylation | DINACTLTTSPRLPV CCCCCCCCCCCCCCC | 13.69 | 25619855 | |
| 641 | Phosphorylation | INACTLTTSPRLPVF CCCCCCCCCCCCCCC | 39.59 | 25521595 | |
| 642 | Phosphorylation | NACTLTTSPRLPVF- CCCCCCCCCCCCCC- | 11.64 | 26824392 |
| Modified Location | Modified Residue | Modification | Type of Upstream Proteins | Gene Name of Upstream Proteins | UniProt AC of Upstream Proteins | Sources |
|---|---|---|---|---|---|---|
| 29 | S | Phosphorylation | Kinase | MAPK1 | P63085 | Uniprot |
| 43 | S | Phosphorylation | Kinase | PKA-FAMILY | - | GPS |
| 43 | S | Phosphorylation | Kinase | PKA | - | Uniprot |
| 43 | S | Phosphorylation | Kinase | MAPK1 | P63085 | Uniprot |
| 233 | S | Phosphorylation | Kinase | PRKACA | P05132 | GPS |
| 233 | S | Phosphorylation | Kinase | PKA-FAMILY | - | GPS |
| 233 | S | Phosphorylation | Kinase | PKA | - | Uniprot |
| 259 | S | Phosphorylation | Kinase | PKA | - | Uniprot |
| 259 | S | Phosphorylation | Kinase | AKT1 | P31750 | Uniprot |
| 259 | S | Phosphorylation | Kinase | PKC | - | Uniprot |
| 269 | T | Phosphorylation | Kinase | PKA | - | Uniprot |
| 289 | S | Phosphorylation | Kinase | MAPK1 | P63085 | Uniprot |
| 296 | S | Phosphorylation | Kinase | MAPK1 | P63085 | Uniprot |
| 301 | S | Phosphorylation | Kinase | MAPK1 | P63085 | Uniprot |
| 338 | S | Phosphorylation | Kinase | MEK1 | Q02750 | PSP |
| 338 | S | Phosphorylation | Kinase | PAK1 | Q13153 | PSP |
| 338 | S | Phosphorylation | Kinase | PAK1 | O88643 | Uniprot |
| 338 | S | Phosphorylation | Kinase | PAK2 | Q8CIN4 | Uniprot |
| 338 | S | Phosphorylation | Kinase | PAK3 | Q61036 | Uniprot |
| 338 | S | Phosphorylation | Kinase | PAK5 | Q8C015 | Uniprot |
| 339 | S | Phosphorylation | Kinase | PAK2 | Q8CIN4 | Uniprot |
| 339 | S | Phosphorylation | Kinase | PAK3 | Q61036 | Uniprot |
| 339 | S | Phosphorylation | Kinase | PAK1 | O88643 | Uniprot |
| 340 | Y | Phosphorylation | Kinase | SRC | P05480 | Uniprot |
| 341 | Y | Phosphorylation | Kinase | SRC | P05480 | Uniprot |
| 341 | Y | Phosphorylation | Kinase | LYN | P25911 | PSP |
| 497 | S | Phosphorylation | Kinase | PKC | - | Uniprot |
| 499 | S | Phosphorylation | Kinase | PRKCA | P20444 | GPS |
| 499 | S | Phosphorylation | Kinase | PKC | - | Uniprot |
| 621 | S | Phosphorylation | Kinase | RAF1 | Q99N57 | PSP |
| 642 | S | Phosphorylation | Kinase | MAPK1 | P63085 | Uniprot |
| - | K | Ubiquitination | E3 ubiquitin ligase | Stub1 | Q9WUD1 | PMID:22199232 |
| Modified Location | Modified Residue | Modification | Function | Reference |
|---|---|---|---|---|
| 29 | S | Phosphorylation |
| 15664191 |
| 43 | S | Phosphorylation |
| 15664191 |
| 259 | S | Phosphorylation |
| 15664191 |
| 259 | S | Phosphorylation |
| 15664191 |
| 269 | T | Phosphorylation |
| - |
| 289 | S | Methylation |
| 15664191 |
| 289 | S | Phosphorylation |
| 15664191 |
| 289 | S | Phosphorylation |
| 15664191 |
| 296 | S | Phosphorylation |
| 15664191 |
| 296 | S | Phosphorylation |
| 15664191 |
| 296 | S | Phosphorylation |
| 15664191 |
| 296 | S | Methylation |
| 15664191 |
| 296 | S | Methylation |
| 15664191 |
| 301 | S | Methylation |
| 15664191 |
| 301 | S | Methylation |
| 15664191 |
| 301 | S | Phosphorylation |
| 15664191 |
| 301 | S | Phosphorylation |
| 15664191 |
| 301 | S | Phosphorylation |
| 15664191 |
| 338 | S | Methylation |
| 15664191 |
| 338 | S | Phosphorylation |
| 15664191 |
| 338 | S | Phosphorylation |
| 15664191 |
| 338 | S | Phosphorylation |
| 15664191 |
| 338 | S | Phosphorylation |
| 15664191 |
| 338 | S | Phosphorylation |
| 15664191 |
| 338 | S | Methylation |
| 15664191 |
| 339 | S | Phosphorylation |
| - |
| 491 | T | Phosphorylation |
| - |
| 494 | S | Phosphorylation |
| - |
| 563 | R | Methylation |
| - |
| 621 | S | Methylation |
| 15664191 |
| 621 | S | Methylation |
| 15664191 |
| 621 | S | Phosphorylation |
| 15664191 |
| 621 | S | Phosphorylation |
| 15664191 |
| 621 | S | Phosphorylation |
| 15664191 |
| 642 | S | Phosphorylation |
| 15664191 |
* Distance = the distance between SAP position and PTM sites.
| Modified Location | Modification | Variant Position (Distance <= 10) |
Residue Change | SAP | Related Disease | Reference |
|---|---|---|---|---|---|---|
Oops, there are no SNP-PTM records of RAF1_MOUSE !! | ||||||
| Interacting Protein | Gene Name | Interaction Type | PPI Reference | Domain-Domain Interactions |
|---|---|---|---|---|
| RASH_MOUSE | Hras | physical | 16803888 | |
| MP2K1_MOUSE | Map2k1 | physical | 20956560 | |
| NEK10_MOUSE | Nek10 | physical | 20956560 | |
| BRAF_MOUSE | Braf | physical | 18332145 | |
| KSR1_MOUSE | Ksr1 | physical | 18332145 | |
| BRAP_MOUSE | Brap | physical | 18332145 | |
| RFXK_MOUSE | Rfxank | physical | 10329666 | |
| RASH_MOUSE | Hras | physical | 16405865 | |
| ROCK2_MOUSE | Rock2 | physical | 16365167 | |
| RASH_MOUSE | Hras | physical | 17984326 | |
| VKIND_MOUSE | Kndc1 | physical | 17984326 | |
| RABX5_MOUSE | Rabgef1 | physical | 15235600 | |
| RASH_MOUSE | Hras | physical | 15235600 | |
| RASH_MOUSE | Hras | physical | 24470255 | |
| PAXI_MOUSE | Pxn | physical | 14636584 | |
| MP2K1_MOUSE | Map2k1 | physical | 14636584 | |
| MP2K1_MOUSE | Map2k1 | physical | 11435472 | |
| RASH_MOUSE | Hras | physical | 11435472 | |
| PEBP1_MOUSE | Pebp1 | physical | 23055494 | |
| MP2K1_MOUSE | Map2k1 | physical | 23055494 | |
| RASH_MOUSE | Hras | physical | 28053233 |
| Kegg Drug | ||||||
|---|---|---|---|---|---|---|
| DrugBank | ||||||
| There are no disease associations of PTM sites. | ||||||
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| Phosphorylation | |
| Reference | PubMed |
| "Solid tumor proteome and phosphoproteome analysis by high resolutionmass spectrometry."; Zanivan S., Gnad F., Wickstroem S.A., Geiger T., Macek B., Cox J.,Faessler R., Mann M.; J. Proteome Res. 7:5314-5326(2008). Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-621, AND MASSSPECTROMETRY. | |
| "Regulation of Raf-1 by direct feedback phosphorylation."; Dougherty M.K., Muller J., Ritt D.A., Zhou M., Zhou X.Z.,Copeland T.D., Conrads T.P., Veenstra T.D., Lu K.P., Morrison D.K.; Mol. Cell 17:215-224(2005). Cited for: PHOSPHORYLATION AT SER-29; SER-43; SER-259; SER-289; SER-296; SER-301;SER-338; SER-621 AND SER-642, ENZYME REGULATION, AND INTERACTION WITHPIN1; PPP2CA AND PPP2R1B. | |