NAT10_HUMAN - dbPTM
NAT10_HUMAN - PTM Information in dbPTM
Basic Information of Protein
UniProt ID NAT10_HUMAN
UniProt AC Q9H0A0
Protein Name RNA cytidine acetyltransferase {ECO:0000255|HAMAP-Rule:MF_03211, ECO:0000303|PubMed:25411247}
Gene Name NAT10 {ECO:0000255|HAMAP-Rule:MF_03211}
Organism Homo sapiens (Human).
Sequence Length 1025
Subcellular Localization Nucleus, nucleolus . Nucleolar in interphase and redistributes to the perichromosomal layer and to the midbody during telophase.
Protein Description RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. [PubMed: 25411247]
Protein Sequence MHRKKVDNRIRILIENGVAERQRSLFVVVGDRGKDQVVILHHMLSKATVKARPSVLWCYKKELGFSSHRKKRMRQLQKKIKNGTLNIKQDDPFELFIAATNIRYCYYNETHKILGNTFGMCVLQDFEALTPNLLARTVETVEGGGLVVILLRTMNSLKQLYTVTMDVHSRYRTEAHQDVVGRFNERFILSLASCKKCLVIDDQLNILPISSHVATMEALPPQTPDESLGPSDLELRELKESLQDTQPVGVLVDCCKTLDQAKAVLKFIEGISEKTLRSTVALTAARGRGKSAALGLAIAGAVAFGYSNIFVTSPSPDNLHTLFEFVFKGFDALQYQEHLDYEIIQSLNPEFNKAVIRVNVFREHRQTIQYIHPADAVKLGQAELVVIDEAAAIPLPLVKSLLGPYLVFMASTINGYEGTGRSLSLKLIQQLRQQSAQSQVSTTAENKTTTTARLASARTLYEVSLQESIRYAPGDAVEKWLNDLLCLDCLNITRIVSGCPLPEACELYYVNRDTLFCYHKASEVFLQRLMALYVASHYKNSPNDLQMLSDAPAHHLFCLLPPVPPTQNALPEVLAVIQVCLEGEISRQSILNSLSRGKKASGDLIPWTVSEQFQDPDFGGLSGGRVVRIAVHPDYQGMGYGSRALQLLQMYYEGRFPCLEEKVLETPQEIHTVSSEAVSLLEEVITPRKDLPPLLLKLNERPAERLDYLGVSYGLTPRLLKFWKRAGFVPVYLRQTPNDLTGEHSCIMLKTLTDEDEADQGGWLAAFWKDFRRRFLALLSYQFSTFSPSLALNIIQNRNMGKPAQPALSREELEALFLPYDLKRLEMYSRNMVDYHLIMDMIPAISRIYFLNQLGDLALSAAQSALLLGIGLQHKSVDQLEKEIELPSGQLMGLFNRIIRKVVKLFNEVQEKAIEEQMVAAKDVVMEPTMKTLSDDLDEAAKEFQEKHKKEVGKLKSMDLSEYIIRGDDEEWNEVLNKAGPNASIISLKSDKKRKLEAKQEPKQSKKLKNRETKNKKDMKLKRKK
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
32MethylationLFVVVGDRGKDQVVI
EEEEEECCCCCEEEE
48.40-
34AcetylationVVVGDRGKDQVVILH
EEEECCCCCEEEEEE
45.9726051181
46AcetylationILHHMLSKATVKARP
EEECCCCCCCCCCCC
44.0825953088
60AcetylationPSVLWCYKKELGFSS
CCEEHHHCCCCCCCH
36.3125825284
61AcetylationSVLWCYKKELGFSSH
CEEHHHCCCCCCCHH
31.5326051181
61UbiquitinationSVLWCYKKELGFSSH
CEEHHHCCCCCCCHH
31.5329967540
66PhosphorylationYKKELGFSSHRKKRM
HCCCCCCCHHHHHHH
24.3623401153
67PhosphorylationKKELGFSSHRKKRMR
CCCCCCCHHHHHHHH
25.6762169863
104PhosphorylationIAATNIRYCYYNETH
EEEECEEEEEECCHH
4.8828152594
106PhosphorylationATNIRYCYYNETHKI
EECEEEEEECCHHHH
10.6128152594
107PhosphorylationTNIRYCYYNETHKIL
ECEEEEEECCHHHHC
11.7128152594
110PhosphorylationRYCYYNETHKILGNT
EEEEECCHHHHCCCC
25.4928152594
137PhosphorylationTPNLLARTVETVEGG
CHHHHEEEEEEECCC
19.6546162651
156PhosphorylationILLRTMNSLKQLYTV
EEEECCCCCCHHEEE
26.5646162639
164PhosphorylationLKQLYTVTMDVHSRY
CCHHEEEECCHHHHH
10.3946162657
167UbiquitinationLYTVTMDVHSRYRTE
HEEEECCHHHHHCCH
2.83-
167UbiquitinationLYTVTMDVHSRYRTE
HEEEECCHHHHHCCH
2.8329967540
173PhosphorylationDVHSRYRTEAHQDVV
CHHHHHCCHHHHHHH
28.7037817245
184UbiquitinationQDVVGRFNERFILSL
HHHHHHHCHHHHHHH
37.87-
184UbiquitinationQDVVGRFNERFILSL
HHHHHHHCHHHHHHH
37.8729967540
190UbiquitinationFNERFILSLASCKKC
HCHHHHHHHHHCCEE
19.64-
190PhosphorylationFNERFILSLASCKKC
HCHHHHHHHHHCCEE
19.6430108239
190UbiquitinationFNERFILSLASCKKC
HCHHHHHHHHHCCEE
19.6429967540
193PhosphorylationRFILSLASCKKCLVI
HHHHHHHHCCEEEEE
31.5930108239
194UbiquitinationFILSLASCKKCLVID
HHHHHHHCCEEEEEC
3.98-
195AcetylationILSLASCKKCLVIDD
HHHHHHCCEEEEECC
43.9825953088
195MethylationILSLASCKKCLVIDD
HHHHHHCCEEEEECC
43.98-
202UbiquitinationKKCLVIDDQLNILPI
CEEEEECCCCCCCCC
43.68-
202UbiquitinationKKCLVIDDQLNILPI
CEEEEECCCCCCCCC
43.6822817900
223PhosphorylationMEALPPQTPDESLGP
HHCCCCCCCCCCCCC
38.1825159151
239UbiquitinationDLELRELKESLQDTQ
HHHHHHHHHHHHCCC
40.2729967540
256AcetylationGVLVDCCKTLDQAKA
HHHHHHHHCHHHHHH
59.4626051181
256UbiquitinationGVLVDCCKTLDQAKA
HHHHHHHHCHHHHHH
59.4629967540
2622-HydroxyisobutyrylationCKTLDQAKAVLKFIE
HHCHHHHHHHHHHHH
33.13-
262UbiquitinationCKTLDQAKAVLKFIE
HHCHHHHHHHHHHHH
33.1329967540
2662-HydroxyisobutyrylationDQAKAVLKFIEGISE
HHHHHHHHHHHCCCH
37.38-
266AcetylationDQAKAVLKFIEGISE
HHHHHHHHHHHCCCH
37.3826051181
266UbiquitinationDQAKAVLKFIEGISE
HHHHHHHHHHHCCCH
37.38-
272PhosphorylationLKFIEGISEKTLRST
HHHHHCCCHHHHHHH
43.8522496350
2742-HydroxyisobutyrylationFIEGISEKTLRSTVA
HHHCCCHHHHHHHHH
46.17-
274AcetylationFIEGISEKTLRSTVA
HHHCCCHHHHHHHHH
46.1726051181
274UbiquitinationFIEGISEKTLRSTVA
HHHCCCHHHHHHHHH
46.1721906983
278PhosphorylationISEKTLRSTVALTAA
CCHHHHHHHHHHHHH
30.2821406692
279PhosphorylationSEKTLRSTVALTAAR
CHHHHHHHHHHHHHC
11.9021406692
283PhosphorylationLRSTVALTAARGRGK
HHHHHHHHHHCCCCH
14.4521406692
354AcetylationLNPEFNKAVIRVNVF
HCHHHHHCEEEEEHH
11.76-
354UbiquitinationLNPEFNKAVIRVNVF
HCHHHHHCEEEEEHH
11.76-
354AcetylationLNPEFNKAVIRVNVF
HCHHHHHCEEEEEHH
11.7619608861
375UbiquitinationIQYIHPADAVKLGQA
CEEECHHHCHHCCCC
57.24-
375UbiquitinationIQYIHPADAVKLGQA
CEEECHHHCHHCCCC
57.2421963094
416PhosphorylationMASTINGYEGTGRSL
EEECCCCCCCCCHHH
13.4925884760
422PhosphorylationGYEGTGRSLSLKLIQ
CCCCCCHHHHHHHHH
24.5324719451
424PhosphorylationEGTGRSLSLKLIQQL
CCCCHHHHHHHHHHH
25.3824719451
426AcetylationTGRSLSLKLIQQLRQ
CCHHHHHHHHHHHHH
39.9219608861
426MalonylationTGRSLSLKLIQQLRQ
CCHHHHHHHHHHHHH
39.9226320211
426UbiquitinationTGRSLSLKLIQQLRQ
CCHHHHHHHHHHHHH
39.9219608861
435PhosphorylationIQQLRQQSAQSQVST
HHHHHHHHHHHHCCC
21.6719691289
438PhosphorylationLRQQSAQSQVSTTAE
HHHHHHHHHCCCCCC
32.0619691289
441PhosphorylationQSAQSQVSTTAENKT
HHHHHHCCCCCCCCC
16.6520068231
442PhosphorylationSAQSQVSTTAENKTT
HHHHHCCCCCCCCCH
31.0420068231
443PhosphorylationAQSQVSTTAENKTTT
HHHHCCCCCCCCCHH
25.1920068231
447UbiquitinationVSTTAENKTTTTARL
CCCCCCCCCHHHHHH
38.4621906983
448UbiquitinationSTTAENKTTTTARLA
CCCCCCCCHHHHHHH
40.74-
448PhosphorylationSTTAENKTTTTARLA
CCCCCCCCHHHHHHH
40.7423312004
449PhosphorylationTTAENKTTTTARLAS
CCCCCCCHHHHHHHH
24.6120068231
450PhosphorylationTAENKTTTTARLASA
CCCCCCHHHHHHHHC
24.5620068231
451PhosphorylationAENKTTTTARLASAR
CCCCCHHHHHHHHCC
14.0023312004
456PhosphorylationTTTARLASARTLYEV
HHHHHHHHCCCCEEE
23.9120068231
471PhosphorylationSLQESIRYAPGDAVE
HHHHHHCCCCCCHHH
18.5829396449
493O-linked_GlycosylationCLDCLNITRIVSGCP
HHHHCCCCHHHCCCC
17.1730379171
508PhosphorylationLPEACELYYVNRDTL
CCCHHEEEEECCCEE
5.3128152594
509PhosphorylationPEACELYYVNRDTLF
CCHHEEEEECCCEEC
12.1328152594
520AcetylationDTLFCYHKASEVFLQ
CEECCCHHHHHHHHH
27.4226051181
520UbiquitinationDTLFCYHKASEVFLQ
CEECCCHHHHHHHHH
27.42-
527UbiquitinationKASEVFLQRLMALYV
HHHHHHHHHHHHHHH
25.62-
530SulfoxidationEVFLQRLMALYVASH
HHHHHHHHHHHHHHH
2.3528183972
589PhosphorylationEGEISRQSILNSLSR
CCCCCHHHHHHHHHC
28.1219691289
593PhosphorylationSRQSILNSLSRGKKA
CHHHHHHHHHCCCCC
25.0325159151
599UbiquitinationNSLSRGKKASGDLIP
HHHHCCCCCCCCCCC
51.08-
617UbiquitinationSEQFQDPDFGGLSGG
CHHCCCCCCCCCCCC
64.2129967540
625UbiquitinationFGGLSGGRVVRIAVH
CCCCCCCCEEEEEEC
27.5524816145
635PhosphorylationRIAVHPDYQGMGYGS
EEEECCCCCCCCHHH
16.06110758145
666PhosphorylationLEEKVLETPQEIHTV
HHHHHCCCCCHHHCC
26.5522199227
672PhosphorylationETPQEIHTVSSEAVS
CCCCHHHCCCHHHHH
27.9522199227
674PhosphorylationPQEIHTVSSEAVSLL
CCHHHCCCHHHHHHH
24.5029523821
675PhosphorylationQEIHTVSSEAVSLLE
CHHHCCCHHHHHHHH
25.8228464451
679PhosphorylationTVSSEAVSLLEEVIT
CCCHHHHHHHHHHCC
33.9946162645
686PhosphorylationSLLEEVITPRKDLPP
HHHHHHCCCCCCCCC
23.4029496963
689UbiquitinationEEVITPRKDLPPLLL
HHHCCCCCCCCCHHH
65.8929967540
697AcetylationDLPPLLLKLNERPAE
CCCCHHHHCCCCCHH
49.5926051181
697UbiquitinationDLPPLLLKLNERPAE
CCCCHHHHCCCCCHH
49.5924816145
708PhosphorylationRPAERLDYLGVSYGL
CCHHHCCCCCCCCCC
15.2223186163
712PhosphorylationRLDYLGVSYGLTPRL
HCCCCCCCCCCCHHH
16.2223186163
713PhosphorylationLDYLGVSYGLTPRLL
CCCCCCCCCCCHHHH
17.4723186163
716PhosphorylationLGVSYGLTPRLLKFW
CCCCCCCCHHHHHHH
11.2928152594
721AcetylationGLTPRLLKFWKRAGF
CCCHHHHHHHHHCCC
54.4926051181
732PhosphorylationRAGFVPVYLRQTPND
HCCCEEEEEECCCCC
7.0728152594
741PhosphorylationRQTPNDLTGEHSCIM
ECCCCCCCCCCEEEE
43.3046162663
751UbiquitinationHSCIMLKTLTDEDEA
CEEEEEEECCCHHHH
30.81-
751UbiquitinationHSCIMLKTLTDEDEA
CEEEEEEECCCHHHH
30.8122817900
800SulfoxidationNIIQNRNMGKPAQPA
HHHHCCCCCCCCCCC
7.0621406390
809PhosphorylationKPAQPALSREELEAL
CCCCCCCCHHHHHHH
39.4920068231
820PhosphorylationLEALFLPYDLKRLEM
HHHHHCCHHHHHHHH
35.7364757
8232-HydroxyisobutyrylationLFLPYDLKRLEMYSR
HHCCHHHHHHHHHHH
52.63-
823AcetylationLFLPYDLKRLEMYSR
HHCCHHHHHHHHHHH
52.6326822725
823UbiquitinationLFLPYDLKRLEMYSR
HHCCHHHHHHHHHHH
52.6321906983
828PhosphorylationDLKRLEMYSRNMVDY
HHHHHHHHHHCCCCH
8.6322817900
829PhosphorylationLKRLEMYSRNMVDYH
HHHHHHHHHCCCCHH
18.8322817900
829UbiquitinationLKRLEMYSRNMVDYH
HHHHHHHHHCCCCHH
18.8322817900
832AcetylationLEMYSRNMVDYHLIM
HHHHHHCCCCHHHHH
2.06-
832UbiquitinationLEMYSRNMVDYHLIM
HHHHHHCCCCHHHHH
2.06-
832UbiquitinationLEMYSRNMVDYHLIM
HHHHHHCCCCHHHHH
2.0621890473
859UbiquitinationNQLGDLALSAAQSAL
HHHHHHHHHHHHHHH
4.6832015554
870UbiquitinationQSALLLGIGLQHKSV
HHHHHHCCCCCCCCH
5.13-
870UbiquitinationQSALLLGIGLQHKSV
HHHHHHCCCCCCCCH
5.1329967540
882AcetylationKSVDQLEKEIELPSG
CCHHHHHHHCCCCHH
73.0026051181
884UbiquitinationVDQLEKEIELPSGQL
HHHHHHHCCCCHHHH
11.0432015554
892SulfoxidationELPSGQLMGLFNRII
CCCHHHHHHHHHHHH
3.1821406390
901UbiquitinationLFNRIIRKVVKLFNE
HHHHHHHHHHHHHHH
40.7622817900
904UbiquitinationRIIRKVVKLFNEVQE
HHHHHHHHHHHHHHH
50.8021890473
904AcetylationRIIRKVVKLFNEVQE
HHHHHHHHHHHHHHH
50.8025953088
904UbiquitinationRIIRKVVKLFNEVQE
HHHHHHHHHHHHHHH
50.8022817900
906UbiquitinationIRKVVKLFNEVQEKA
HHHHHHHHHHHHHHH
6.4129967540
917UbiquitinationQEKAIEEQMVAAKDV
HHHHHHHHHHHHHHH
20.89-
917UbiquitinationQEKAIEEQMVAAKDV
HHHHHHHHHHHHHHH
20.8933845483
918SulfoxidationEKAIEEQMVAAKDVV
HHHHHHHHHHHHHHH
2.2121406390
926SulfoxidationVAAKDVVMEPTMKTL
HHHHHHHCCCHHHHC
5.2621406390
927UbiquitinationAAKDVVMEPTMKTLS
HHHHHHCCCHHHHCC
26.4724816145
929PhosphorylationKDVVMEPTMKTLSDD
HHHHCCCHHHHCCHH
20.2811735715
931UbiquitinationVVMEPTMKTLSDDLD
HHCCCHHHHCCHHHH
49.11-
931UbiquitinationVVMEPTMKTLSDDLD
HHCCCHHHHCCHHHH
49.1123503661
932PhosphorylationVMEPTMKTLSDDLDE
HCCCHHHHCCHHHHH
22.2230266825
934UbiquitinationEPTMKTLSDDLDEAA
CCHHHHCCHHHHHHH
34.02-
934PhosphorylationEPTMKTLSDDLDEAA
CCHHHHCCHHHHHHH
34.0229255136
934UbiquitinationEPTMKTLSDDLDEAA
CCHHHHCCHHHHHHH
34.0223503661
935UbiquitinationPTMKTLSDDLDEAAK
CHHHHCCHHHHHHHH
64.7023503661
937UbiquitinationMKTLSDDLDEAAKEF
HHHCCHHHHHHHHHH
8.4423503661
942AcetylationDDLDEAAKEFQEKHK
HHHHHHHHHHHHHHH
67.1426051181
942UbiquitinationDDLDEAAKEFQEKHK
HHHHHHHHHHHHHHH
67.1429967540
945UbiquitinationDEAAKEFQEKHKKEV
HHHHHHHHHHHHHHH
60.9824816145
947AcetylationAAKEFQEKHKKEVGK
HHHHHHHHHHHHHHH
50.3611794121
948UbiquitinationAKEFQEKHKKEVGKL
HHHHHHHHHHHHHHH
45.7430230243
956UbiquitinationKKEVGKLKSMDLSEY
HHHHHHHCCCCHHHH
47.4232015554
957PhosphorylationKEVGKLKSMDLSEYI
HHHHHHCCCCHHHHH
28.1525159151
961PhosphorylationKLKSMDLSEYIIRGD
HHCCCCHHHHHHCCC
24.8828555341
963PhosphorylationKSMDLSEYIIRGDDE
CCCCHHHHHHCCCHH
9.7730991561
978UbiquitinationEWNEVLNKAGPNASI
HHHHHHHHHCCCCEE
51.0329967540
984PhosphorylationNKAGPNASIISLKSD
HHHCCCCEEEEECCH
27.3925159151
987PhosphorylationGPNASIISLKSDKKR
CCCCEEEEECCHHHH
28.2425159151
989AcetylationNASIISLKSDKKRKL
CCEEEEECCHHHHHH
50.2225953088
989UbiquitinationNASIISLKSDKKRKL
CCEEEEECCHHHHHH
50.2233845483
990PhosphorylationASIISLKSDKKRKLE
CEEEEECCHHHHHHH
61.0125159151
999AcetylationKKRKLEAKQEPKQSK
HHHHHHHCCCHHHHH
45.9126051181
999UbiquitinationKKRKLEAKQEPKQSK
HHHHHHHCCCHHHHH
45.9124816145
1003UbiquitinationLEAKQEPKQSKKLKN
HHHCCCHHHHHHHCC
67.4623503661
1006UbiquitinationKQEPKQSKKLKNRET
CCCHHHHHHHCCCCC
60.6823503661
1007UbiquitinationQEPKQSKKLKNRETK
CCHHHHHHHCCCCCC
70.6923503661
1009UbiquitinationPKQSKKLKNRETKNK
HHHHHHHCCCCCCCH
63.9423503661
1017UbiquitinationNRETKNKKDMKLKRK
CCCCCCHHHHHHHCC
72.8924816145
1020UbiquitinationTKNKKDMKLKRKK--
CCCHHHHHHHCCC--
62.0730230243

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of NAT10_HUMAN !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference
426KAcetylation

19608861

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of NAT10_HUMAN !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
UTP20_HUMANUTP20physical
22939629
ABCF2_HUMANABCF2physical
26344197
IF4G1_HUMANEIF4G1physical
26344197
NOP2_HUMANNOP2physical
26344197
RL5_HUMANRPL5physical
26344197
TSR1_HUMANTSR1physical
26344197
P53_HUMANTP53physical
26882543
MDM2_HUMANMDM2physical
26882543
UB2D2_HUMANUBE2D2physical
26882543
UBC_HUMANUBCphysical
26882543
THUM1_HUMANTHUMPD1physical
25653167

Drug and Disease Associations
Kegg Disease
There are no disease associations of PTM sites.
OMIM Disease
There are no disease associations of PTM sites.
Kegg Drug
There are no disease associations of PTM sites.
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of NAT10_HUMAN

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Related Literatures of Post-Translational Modification
Acetylation
ReferencePubMed
"Lysine acetylation targets protein complexes and co-regulates majorcellular functions.";
Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T.,Olsen J.V., Mann M.;
Science 325:834-840(2009).
Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-426, AND MASS SPECTROMETRY.
Phosphorylation
ReferencePubMed
"A quantitative atlas of mitotic phosphorylation.";
Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E.,Elledge S.J., Gygi S.P.;
Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-934; SER-984 ANDSER-987, AND MASS SPECTROMETRY.
"Evaluation of the low-specificity protease elastase for large-scalephosphoproteome analysis.";
Wang B., Malik R., Nigg E.A., Korner R.;
Anal. Chem. 80:9526-9533(2008).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-435; THR-932 ANDSER-934, AND MASS SPECTROMETRY.

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