RIMS1_MOUSE - dbPTM
RIMS1_MOUSE - PTM Information in dbPTM
Basic Information of Protein
UniProt ID RIMS1_MOUSE
UniProt AC Q99NE5
Protein Name Regulating synaptic membrane exocytosis protein 1
Gene Name Rims1
Organism Mus musculus (Mouse).
Sequence Length 1463
Subcellular Localization Cell membrane
Peripheral membrane protein. Cell junction, synapse. Cell junction, synapse, presynaptic cell membrane
Peripheral membrane protein.
Protein Description Rab effector involved in exocytosis. [PubMed: 11797009 May act as scaffold protein that regulates neurotransmitter release at the active zone. Essential for maintaining normal probability of neurotransmitter release and for regulating release during short-term synaptic plasticity]
Protein Sequence MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKCVVRDMAKPAACKTPRNAESQPHQPPLNIFRCVCVPRKPSSEEGGPDRNWRLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFFGSGPQQPSQDGTLSDTATGAGSEVPREKKARLQERSRSQTPLSTAAVSSQDTASHGAPLDRNKGAEPSQQALGPEQKQASRSRSEPPRERKKAPGLSEQNGKGGQKSERKRVPKSVVQPGEGTADERERKERRETRRLEKGRSQDYPDRLEKREDGRVAEDEKQRKEEEGVSTPEYTSCEDVELESESVSEKGDLDYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKLLEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQDEESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGESSSKKLQRSQRISDSDISDYEVDDGIGVVPPVGYRASARESKATTLTVPEQQRTTHHRSRSVSPHRGDDQGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSLADHRSRHAESQYSSEPDSELLMLPRAKRGRSAECLHMTSELQPSLDRARSASTNCLRPDTSLHSPERERGRWSPSLARRRPASPRIQIQHASPENDRHSRKSERSSIQKQSRKGTASDADRVLPPCLSRRGYAIPRATDQPVIRGKHTTRSRSSEHSSIRTLCSMHHLAPGGSAPPSPLLTRTHRQGSPTQSPPADTSFGSRRGRQLPQVPVRSGSIEQASLVVEERTRQMKMKVHRFKQTTGSGSSQELDHEQYSKYNIHKDQYRSCDNASAKSSDSDVSDVSAISRASSTSRLSSTSFMSEQSERPRGRISSFTPKMQGRRMGTSGRAIIKSTSVSGEIYTLEHNDGSQSDTAVGTVGAGGKKRRSSLSAKVVAIVSRRSRSTSQLSQTESGHKKLKSTIQRSTETGMAAEMRKMVRQPSRESTDGSINSYSSEGNLIFPGVRVGPDSQFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMEDKKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSSGPPCIRS
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
44MethylationMAVMDRQKEEEEKEE
HHHHHHHHHHHHHHH
68.90-
55MethylationEKEEAMLKCVVRDMA
HHHHHHHHHHHHHCC
16.34-
95PhosphorylationVCVPRKPSSEEGGPD
EEEECCCCCCCCCCC
54.1125521595
96PhosphorylationCVPRKPSSEEGGPDR
EEECCCCCCCCCCCC
48.4725521595
113PhosphorylationRLHQQFESYKEQVRK
HHHHHHHHHHHHHHH
42.6729899451
114PhosphorylationLHQQFESYKEQVRKI
HHHHHHHHHHHHHHH
16.0225521595
205PhosphorylationSGAWFFGSGPQQPSQ
CCCCCCCCCCCCCCC
41.9922807455
211PhosphorylationGSGPQQPSQDGTLSD
CCCCCCCCCCCCCCC
36.2426804993
215PhosphorylationQQPSQDGTLSDTATG
CCCCCCCCCCCCCCC
31.2321183079
217PhosphorylationPSQDGTLSDTATGAG
CCCCCCCCCCCCCCC
32.5219060867
219PhosphorylationQDGTLSDTATGAGSE
CCCCCCCCCCCCCCC
23.8126804993
221PhosphorylationGTLSDTATGAGSEVP
CCCCCCCCCCCCCCC
29.6526804993
225PhosphorylationDTATGAGSEVPREKK
CCCCCCCCCCCHHHH
34.5820415495
239PhosphorylationKARLQERSRSQTPLS
HHHHHHHHHCCCCCC
35.2225521595
241PhosphorylationRLQERSRSQTPLSTA
HHHHHHHCCCCCCHH
39.3919060867
243PhosphorylationQERSRSQTPLSTAAV
HHHHHCCCCCCHHHC
27.6925521595
246PhosphorylationSRSQTPLSTAAVSSQ
HHCCCCCCHHHCCCC
19.7329899451
247PhosphorylationRSQTPLSTAAVSSQD
HCCCCCCHHHCCCCC
26.7329899451
251PhosphorylationPLSTAAVSSQDTASH
CCCHHHCCCCCHHHC
19.9729899451
252PhosphorylationLSTAAVSSQDTASHG
CCHHHCCCCCHHHCC
26.0229899451
287PhosphorylationKQASRSRSEPPRERK
HHHHHHCCCCCHHHC
56.5629899451
310PhosphorylationNGKGGQKSERKRVPK
CCCCCCCCCCCCCCC
34.4421183079
326PhosphorylationVVQPGEGTADERERK
CCCCCCCCCCHHHHH
27.0029899451
346PhosphorylationRRLEKGRSQDYPDRL
HHHHHHCCCCCHHHH
35.7525521595
349PhosphorylationEKGRSQDYPDRLEKR
HHHCCCCCHHHHHHC
10.2129899451
379 (in isoform 2)Phosphorylation-12.73-
379 (in isoform 7)Phosphorylation-12.73-
406PhosphorylationDYWLDPATWHSRETS
CEEECHHHCCCCCCC
29.1521082442
409PhosphorylationLDPATWHSRETSPIS
ECHHHCCCCCCCCCC
24.3119060867
412PhosphorylationATWHSRETSPISSHP
HHCCCCCCCCCCCCC
38.4030372032
413PhosphorylationTWHSRETSPISSHPV
HCCCCCCCCCCCCCC
18.5825521595
413 (in isoform 7)Phosphorylation-18.5821183079
416PhosphorylationSRETSPISSHPVTWQ
CCCCCCCCCCCCCCC
26.4423335269
417PhosphorylationRETSPISSHPVTWQP
CCCCCCCCCCCCCCC
32.3123335269
421PhosphorylationPISSHPVTWQPSKEG
CCCCCCCCCCCCCCC
23.8826804993
438 (in isoform 7)Phosphorylation-22.1925521595
439 (in isoform 7)Phosphorylation-47.9125521595
443 (in isoform 7)Phosphorylation-4.3925521595
447 (in isoform 7)Phosphorylation-35.1825521595
508 (in isoform 7)Phosphorylation-12.1529899451
514 (in isoform 7)Phosphorylation-37.7321183079
516 (in isoform 7)Phosphorylation-64.8821183079
517 (in isoform 7)Phosphorylation-43.4121183079
526 (in isoform 7)Phosphorylation-18.8921183079
537PhosphorylationDIPRIPESSHPPLES
CCCCCCCCCCCCCCC
28.7020415495
538PhosphorylationIPRIPESSHPPLESS
CCCCCCCCCCCCCCC
38.0529899451
544PhosphorylationSSHPPLESSSSSFES
CCCCCCCCCCCHHHH
43.1120415495
545PhosphorylationSHPPLESSSSSFESQ
CCCCCCCCCCHHHHH
25.5122807455
546PhosphorylationHPPLESSSSSFESQK
CCCCCCCCCHHHHHC
39.0021183079
547PhosphorylationPPLESSSSSFESQKM
CCCCCCCCHHHHHCC
40.7819060867
548PhosphorylationPLESSSSSFESQKME
CCCCCCCHHHHHCCC
34.6730372032
551PhosphorylationSSSSSFESQKMERPS
CCCCHHHHHCCCCCC
32.8420415495
558PhosphorylationSQKMERPSISVISPT
HHCCCCCCEEEECCC
33.4424925903
560PhosphorylationKMERPSISVISPTSP
CCCCCCEEEECCCCC
20.1022324799
563PhosphorylationRPSISVISPTSPGAL
CCCEEEECCCCCCHH
21.7025521595
565PhosphorylationSISVISPTSPGALKD
CEEEECCCCCCHHCC
40.5425521595
566PhosphorylationISVISPTSPGALKDA
EEEECCCCCCHHCCC
25.4025521595
716PhosphorylationSLPLPQPSPFMPRRH
CCCCCCCCCCCCCCC
26.0625521595
728PhosphorylationRRHIHGESSSKKLQR
CCCCCCCCCHHHHHH
44.5027742792
729PhosphorylationRHIHGESSSKKLQRS
CCCCCCCCHHHHHHH
41.7027742792
730PhosphorylationHIHGESSSKKLQRSQ
CCCCCCCHHHHHHHH
42.9927742792
736PhosphorylationSSKKLQRSQRISDSD
CHHHHHHHHCCCCCC
15.7321183079
740PhosphorylationLQRSQRISDSDISDY
HHHHHCCCCCCCCCC
33.0018388127
742PhosphorylationRSQRISDSDISDYEV
HHHCCCCCCCCCCCC
30.0118388127
745PhosphorylationRISDSDISDYEVDDG
CCCCCCCCCCCCCCC
38.8518388127
747PhosphorylationSDSDISDYEVDDGIG
CCCCCCCCCCCCCCC
15.8629899451
786PhosphorylationQRTTHHRSRSVSPHR
HCCCCCCCCCCCCCC
25.2629899451
788PhosphorylationTTHHRSRSVSPHRGD
CCCCCCCCCCCCCCC
28.3529899451
790PhosphorylationHHRSRSVSPHRGDDQ
CCCCCCCCCCCCCCC
19.0829899451
802PhosphorylationDDQGRPRSRLPNVPL
CCCCCCCCCCCCCCC
40.6329899451
812PhosphorylationPNVPLQRSLDEIHPT
CCCCCCCCHHHCCCC
27.4925521595
819PhosphorylationSLDEIHPTRRSRSPT
CHHHCCCCCCCCCCC
25.2629176673
822PhosphorylationEIHPTRRSRSPTRHH
HCCCCCCCCCCCCCH
33.5429176673
834PhosphorylationRHHDASRSLADHRSR
CCHHHHHHHHHHHHH
25.9729899451
848 (in isoform 6)Phosphorylation-22.1629899451
849PhosphorylationHAESQYSSEPDSELL
HHHHHHCCCCCHHHC
48.4929899451
849 (in isoform 6)Phosphorylation-48.4929899451
866PhosphorylationPRAKRGRSAECLHMT
CCHHCCCCHHHHHHH
31.1022324799
873PhosphorylationSAECLHMTSELQPSL
CHHHHHHHCCCCHHH
14.3319060867
874PhosphorylationAECLHMTSELQPSLD
HHHHHHHCCCCHHHH
28.8322324799
879PhosphorylationMTSELQPSLDRARSA
HHCCCCHHHHHHHHH
29.9129899451
887PhosphorylationLDRARSASTNCLRPD
HHHHHHHCCCCCCCC
22.7721183079
895PhosphorylationTNCLRPDTSLHSPER
CCCCCCCCCCCCCHH
35.5521183079
896PhosphorylationNCLRPDTSLHSPERE
CCCCCCCCCCCCHHH
31.3122807455
899PhosphorylationRPDTSLHSPERERGR
CCCCCCCCCHHHCCC
33.4819060867
908PhosphorylationERERGRWSPSLARRR
HHHCCCCCHHHHHCC
11.8430372032
927PhosphorylationRIQIQHASPENDRHS
CCEEEECCCCCCCCC
30.5325521595
934 (in isoform 4)Phosphorylation-42.1529899451
936 (in isoform 4)Phosphorylation-60.7329899451
986PhosphorylationRGKHTTRSRSSEHSS
CCCCCCCCCCCCHHH
34.1329899451
988PhosphorylationKHTTRSRSSEHSSIR
CCCCCCCCCCHHHHH
41.1329899451
992PhosphorylationRSRSSEHSSIRTLCS
CCCCCCHHHHHHHHH
24.3329899451
993PhosphorylationSRSSEHSSIRTLCSM
CCCCCHHHHHHHHHH
20.2829899451
999PhosphorylationSSIRTLCSMHHLAPG
HHHHHHHHHCCCCCC
25.0228059163
1008PhosphorylationHHLAPGGSAPPSPLL
CCCCCCCCCCCCCCC
43.44-
1018PhosphorylationPSPLLTRTHRQGSPT
CCCCCCCCCCCCCCC
19.0429899451
1023PhosphorylationTRTHRQGSPTQSPPA
CCCCCCCCCCCCCCC
19.2125521595
1025PhosphorylationTHRQGSPTQSPPADT
CCCCCCCCCCCCCCC
43.2925521595
1026 (in isoform 7)Phosphorylation-58.2729899451
1027PhosphorylationRQGSPTQSPPADTSF
CCCCCCCCCCCCCCC
35.0225521595
1027 (in isoform 7)Phosphorylation-35.0229899451
1049PhosphorylationLPQVPVRSGSIEQAS
CCCCCCCCCCHHHHH
36.8125521595
1051PhosphorylationQVPVRSGSIEQASLV
CCCCCCCCHHHHHHH
24.9725521595
1056PhosphorylationSGSIEQASLVVEERT
CCCHHHHHHHHHHHH
22.7629899451
1076PhosphorylationKVHRFKQTTGSGSSQ
EEEEECCCCCCCCCC
33.4422324799
1077PhosphorylationVHRFKQTTGSGSSQE
EEEECCCCCCCCCCC
27.1922324799
1079PhosphorylationRFKQTTGSGSSQELD
EECCCCCCCCCCCCC
33.1522324799
1081PhosphorylationKQTTGSGSSQELDHE
CCCCCCCCCCCCCHH
30.4622324799
1082PhosphorylationQTTGSGSSQELDHEQ
CCCCCCCCCCCCHHH
31.0629899451
1090PhosphorylationQELDHEQYSKYNIHK
CCCCHHHHHHCCCCH
12.2622807455
1091PhosphorylationELDHEQYSKYNIHKD
CCCHHHHHHCCCCHH
28.4922324799
1100PhosphorylationYNIHKDQYRSCDNAS
CCCCHHHHHCCCCCC
18.0329899451
1102PhosphorylationIHKDQYRSCDNASAK
CCHHHHHCCCCCCCC
22.3829899451
1107PhosphorylationYRSCDNASAKSSDSD
HHCCCCCCCCCCCCC
42.3520415495
1110PhosphorylationCDNASAKSSDSDVSD
CCCCCCCCCCCCHHH
38.8125521595
1111PhosphorylationDNASAKSSDSDVSDV
CCCCCCCCCCCHHHH
40.1925521595
1113PhosphorylationASAKSSDSDVSDVSA
CCCCCCCCCHHHHHH
41.6925521595
1116PhosphorylationKSSDSDVSDVSAISR
CCCCCCHHHHHHHHH
36.9722807455
1119PhosphorylationDSDVSDVSAISRASS
CCCHHHHHHHHHHHC
25.5220415495
1122PhosphorylationVSDVSAISRASSTSR
HHHHHHHHHHHCCCC
22.8520415495
1131PhosphorylationASSTSRLSSTSFMSE
HHCCCCCCCCCCCCC
30.3829899451
1132PhosphorylationSSTSRLSSTSFMSEQ
HCCCCCCCCCCCCCC
32.4429899451
1133PhosphorylationSTSRLSSTSFMSEQS
CCCCCCCCCCCCCCC
23.7023567750
1149PhosphorylationRPRGRISSFTPKMQG
CCCCCCCCCCHHHCC
30.6729899451
1169PhosphorylationSGRAIIKSTSVSGEI
CCCEEEEEEEECCEE
18.5919060867
1170PhosphorylationGRAIIKSTSVSGEIY
CCEEEEEEEECCEEE
28.3129899451
1171PhosphorylationRAIIKSTSVSGEIYT
CEEEEEEEECCEEEE
22.7519060867
1173PhosphorylationIIKSTSVSGEIYTLE
EEEEEEECCEEEEEE
30.4022807455
1177PhosphorylationTSVSGEIYTLEHNDG
EEECCEEEEEECCCC
10.8529899451
1178PhosphorylationSVSGEIYTLEHNDGS
EECCEEEEEECCCCC
31.1929899451
1185PhosphorylationTLEHNDGSQSDTAVG
EEECCCCCCCCCEEE
29.4022807455
1187PhosphorylationEHNDGSQSDTAVGTV
ECCCCCCCCCEEEEE
38.3319060867
1189PhosphorylationNDGSQSDTAVGTVGA
CCCCCCCCEEEEECC
28.6122807455
1193PhosphorylationQSDTAVGTVGAGGKK
CCCCEEEEECCCCCC
14.7929899451
1203PhosphorylationAGGKKRRSSLSAKVV
CCCCCCCCCCHHHHH
39.4029899451
1204PhosphorylationGGKKRRSSLSAKVVA
CCCCCCCCCHHHHHE
25.2429899451
1206PhosphorylationKKRRSSLSAKVVAIV
CCCCCCCHHHHHEEE
28.17-
1214PhosphorylationAKVVAIVSRRSRSTS
HHHHEEEECCCCCHH
18.83-
1217PhosphorylationVAIVSRRSRSTSQLS
HEEEECCCCCHHHCC
29.4929899451
1219PhosphorylationIVSRRSRSTSQLSQT
EEECCCCCHHHCCCC
33.3929899451
1224PhosphorylationSRSTSQLSQTESGHK
CCCHHHCCCCHHHHH
27.6729899451
1235PhosphorylationSGHKKLKSTIQRSTE
HHHHHHHHHHHHHHH
40.9729899451
1236PhosphorylationGHKKLKSTIQRSTET
HHHHHHHHHHHHHHH
21.3929899451
1240PhosphorylationLKSTIQRSTETGMAA
HHHHHHHHHHHHHHH
17.7725521595
1241PhosphorylationKSTIQRSTETGMAAE
HHHHHHHHHHHHHHH
39.4919060867
1257PhosphorylationRKMVRQPSRESTDGS
HHHHCCCCCCCCCCC
40.1025521595
1260PhosphorylationVRQPSRESTDGSINS
HCCCCCCCCCCCCCC
30.5924925903
1261PhosphorylationRQPSRESTDGSINSY
CCCCCCCCCCCCCCC
39.3625521595
1264PhosphorylationSRESTDGSINSYSSE
CCCCCCCCCCCCCCC
22.7729899451
1267PhosphorylationSTDGSINSYSSEGNL
CCCCCCCCCCCCCCE
25.4029899451
1268PhosphorylationTDGSINSYSSEGNLI
CCCCCCCCCCCCCEE
16.2429899451
1269PhosphorylationDGSINSYSSEGNLIF
CCCCCCCCCCCCEEC
23.0229899451
1270PhosphorylationGSINSYSSEGNLIFP
CCCCCCCCCCCEECC
41.0924925903
1384PhosphorylationQSLVFDESPQGKVLQ
CCCEECCCCCCCEEE
25.1129899451
1444PhosphorylationDPTLTPLTRRASQSS
CCCCCHHHHHHHHHH
21.22-
1448PhosphorylationTPLTRRASQSSLESS
CHHHHHHHHHHHHCC
28.8725521595
1450PhosphorylationLTRRASQSSLESSSG
HHHHHHHHHHHCCCC
34.1018388127
1451PhosphorylationTRRASQSSLESSSGP
HHHHHHHHHHCCCCC
28.6325521595
1454PhosphorylationASQSSLESSSGPPCI
HHHHHHHCCCCCCCC
34.7922324799
1455PhosphorylationSQSSLESSSGPPCIR
HHHHHHCCCCCCCCC
29.9122324799
1456PhosphorylationQSSLESSSGPPCIRS
HHHHHCCCCCCCCCC
65.6822324799
1463PhosphorylationSGPPCIRS-------
CCCCCCCC-------
25.3529899451

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources
413SPhosphorylationKinasePRKACAP17612
GPS

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of RIMS1_MOUSE !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of RIMS1_MOUSE !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
RAB3A_MOUSERab3aphysical
11056535
RPGF4_MOUSERapgef4physical
11056535
RAB3A_MOUSERab3aphysical
12578829
RAB3B_MOUSERab3bphysical
12578829
RAB3C_MOUSERab3cphysical
12578829
RAB3D_MOUSERab3dphysical
12578829
RAB10_MOUSERab10physical
12578829
RAB26_MOUSERab26physical
12578829
RAB37_MOUSERab37physical
12578829

Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of RIMS1_MOUSE

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Related Literatures of Post-Translational Modification
Phosphorylation
ReferencePubMed
"Qualitative and quantitative analyses of protein phosphorylation innaive and stimulated mouse synaptosomal preparations.";
Munton R.P., Tweedie-Cullen R., Livingstone-Zatchej M., Weinandy F.,Waidelich M., Longo D., Gehrig P., Potthast F., Rutishauser D.,Gerrits B., Panse C., Schlapbach R., Mansuy I.M.;
Mol. Cell. Proteomics 6:283-293(2007).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-716; SER-812; SER-1023;THR-1025 AND SER-1448, AND MASS SPECTROMETRY.
"Comprehensive identification of phosphorylation sites in postsynapticdensity preparations.";
Trinidad J.C., Specht C.G., Thalhammer A., Schoepfer R.,Burlingame A.L.;
Mol. Cell. Proteomics 5:914-922(2006).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-346; SER-812; THR-1025;SER-1027 AND SER-1451, AND MASS SPECTROMETRY.

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