UniProt ID | DNLI1_HUMAN | |
---|---|---|
UniProt AC | P18858 | |
Protein Name | DNA ligase 1 | |
Gene Name | LIG1 | |
Organism | Homo sapiens (Human). | |
Sequence Length | 919 | |
Subcellular Localization | Nucleus. | |
Protein Description | DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.. | |
Protein Sequence | MQRSIMSFFHPKKEGKAKKPEKEASNSSRETEPPPKAALKEWNGVVSESDSPVKRPGRKAARVLGSEGEEEDEALSPAKGQKPALDCSQVSPPRPATSPENNASLSDTSPMDSSPSGIPKRRTARKQLPKRTIQEVLEEQSEDEDREAKRKKEEEEEETPKESLTEAEVATEKEGEDGDQPTTPPKPLKTSKAETPTESVSEPEVATKQELQEEEEQTKPPRRAPKTLSSFFTPRKPAVKKEVKEEEPGAPGKEGAAEGPLDPSGYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPEDTY | |
Overview of Protein Modification Sites with Functional and Structural Information | ||
|
* ASA = Accessible Surface Area
Locations | Modification | Substrate Peptides & Secondary Structure |
ASA (%) | Reference | Orthologous Protein Cluster |
---|---|---|---|---|---|
4 | Phosphorylation | ----MQRSIMSFFHP ----CCCCHHHHCCC | 13.02 | 30576142 | |
7 | Phosphorylation | -MQRSIMSFFHPKKE -CCCCHHHHCCCCCC | 24.08 | 28555341 | |
17 (in isoform 3) | Phosphorylation | - | 35.64 | 25849741 | |
19 (in isoform 3) | Phosphorylation | - | 64.37 | 25849741 | |
21 (in isoform 3) | Phosphorylation | - | 72.85 | 25849741 | |
27 | Phosphorylation | PEKEASNSSRETEPP CCHHCCCCCCCCCCC | 28.42 | 25627689 | |
28 | Phosphorylation | EKEASNSSRETEPPP CHHCCCCCCCCCCCC | 38.08 | 28985074 | |
40 | Ubiquitination | PPPKAALKEWNGVVS CCCHHHHHHHCCCCC | 56.83 | - | |
47 | Phosphorylation | KEWNGVVSESDSPVK HHHCCCCCCCCCCCC | 29.04 | 23927012 | |
49 | Phosphorylation | WNGVVSESDSPVKRP HCCCCCCCCCCCCCC | 35.56 | 22167270 | |
51 | Phosphorylation | GVVSESDSPVKRPGR CCCCCCCCCCCCCCH | 40.65 | 19664994 | |
66 | Phosphorylation | KAARVLGSEGEEEDE HHHHHHCCCCCHHCC | 37.96 | 19664994 | |
76 | Phosphorylation | EEEDEALSPAKGQKP CHHCCCCCCCCCCCC | 29.84 | 19664994 | |
79 | Ubiquitination | DEALSPAKGQKPALD CCCCCCCCCCCCCCC | 66.32 | - | |
88 | Phosphorylation | QKPALDCSQVSPPRP CCCCCCCCCCCCCCC | 33.03 | 23401153 | |
91 | Phosphorylation | ALDCSQVSPPRPATS CCCCCCCCCCCCCCC | 22.88 | 19223468 | |
97 | Phosphorylation | VSPPRPATSPENNAS CCCCCCCCCCCCCCC | 47.71 | 30278072 | |
98 | Phosphorylation | SPPRPATSPENNASL CCCCCCCCCCCCCCC | 32.11 | 30278072 | |
104 | Phosphorylation | TSPENNASLSDTSPM CCCCCCCCCCCCCCC | 30.45 | 30278072 | |
106 | Phosphorylation | PENNASLSDTSPMDS CCCCCCCCCCCCCCC | 36.03 | 30278072 | |
108 | Phosphorylation | NNASLSDTSPMDSSP CCCCCCCCCCCCCCC | 31.21 | 30278072 | |
109 | Phosphorylation | NASLSDTSPMDSSPS CCCCCCCCCCCCCCC | 24.18 | 25159151 | |
113 | Phosphorylation | SDTSPMDSSPSGIPK CCCCCCCCCCCCCCC | 37.59 | 23927012 | |
114 | Phosphorylation | DTSPMDSSPSGIPKR CCCCCCCCCCCCCCH | 20.86 | 25159151 | |
116 | Phosphorylation | SPMDSSPSGIPKRRT CCCCCCCCCCCCHHH | 51.83 | 23927012 | |
132 | Phosphorylation | RKQLPKRTIQEVLEE HHHCCHHHHHHHHHH | 32.89 | 23927012 | |
132 (in isoform 3) | Phosphorylation | - | 32.89 | 25849741 | |
141 | Phosphorylation | QEVLEEQSEDEDREA HHHHHHCCCHHHHHH | 50.74 | 19664994 | |
146 | Methylation | EQSEDEDREAKRKKE HCCCHHHHHHHHHHH | 43.66 | 115482091 | |
159 | Phosphorylation | KEEEEEETPKESLTE HHHHHHCCCHHHCCH | 42.83 | 23186163 | |
163 | Phosphorylation | EEETPKESLTEAEVA HHCCCHHHCCHHHHC | 46.87 | 25159151 | |
165 | Phosphorylation | ETPKESLTEAEVATE CCCHHHCCHHHHCCC | 42.29 | 21815630 | |
171 | Phosphorylation | LTEAEVATEKEGEDG CCHHHHCCCCCCCCC | 53.41 | 22167270 | |
182 | Phosphorylation | GEDGDQPTTPPKPLK CCCCCCCCCCCCCCC | 46.42 | 29255136 | |
183 | Phosphorylation | EDGDQPTTPPKPLKT CCCCCCCCCCCCCCC | 44.25 | 29255136 | |
188 | Ubiquitination | PTTPPKPLKTSKAET CCCCCCCCCCCCCCC | 13.59 | - | |
190 | Phosphorylation | TPPKPLKTSKAETPT CCCCCCCCCCCCCCC | 43.04 | 28176443 | |
191 | Phosphorylation | PPKPLKTSKAETPTE CCCCCCCCCCCCCCC | 28.42 | 28176443 | |
192 | Ubiquitination | PKPLKTSKAETPTES CCCCCCCCCCCCCCC | 56.31 | - | |
195 | Ubiquitination | LKTSKAETPTESVSE CCCCCCCCCCCCCCC | 40.13 | - | |
195 | Phosphorylation | LKTSKAETPTESVSE CCCCCCCCCCCCCCC | 40.13 | 19664994 | |
197 | Phosphorylation | TSKAETPTESVSEPE CCCCCCCCCCCCCHH | 48.59 | 22167270 | |
199 | Phosphorylation | KAETPTESVSEPEVA CCCCCCCCCCCHHHH | 33.16 | 29255136 | |
201 | Phosphorylation | ETPTESVSEPEVATK CCCCCCCCCHHHHCH | 57.63 | 19664994 | |
207 | Phosphorylation | VSEPEVATKQELQEE CCCHHHHCHHHHHHH | 38.14 | 29255136 | |
218 | Phosphorylation | LQEEEEQTKPPRRAP HHHHHHHCCCCCCCC | 49.12 | 26074081 | |
219 | Acetylation | QEEEEQTKPPRRAPK HHHHHHCCCCCCCCC | 53.36 | 25953088 | |
219 | Ubiquitination | QEEEEQTKPPRRAPK HHHHHHCCCCCCCCC | 53.36 | - | |
226 | Ubiquitination | KPPRRAPKTLSSFFT CCCCCCCCCHHHCCC | 62.20 | 21890473 | |
226 | Acetylation | KPPRRAPKTLSSFFT CCCCCCCCCHHHCCC | 62.20 | - | |
226 | Ubiquitination | KPPRRAPKTLSSFFT CCCCCCCCCHHHCCC | 62.20 | 21890473 | |
226 | Ubiquitination | KPPRRAPKTLSSFFT CCCCCCCCCHHHCCC | 62.20 | 21890473 | |
227 | Phosphorylation | PPRRAPKTLSSFFTP CCCCCCCCHHHCCCC | 30.71 | 20068231 | |
229 | Phosphorylation | RRAPKTLSSFFTPRK CCCCCCHHHCCCCCC | 30.26 | 23927012 | |
230 | Phosphorylation | RAPKTLSSFFTPRKP CCCCCHHHCCCCCCC | 27.73 | 30266825 | |
233 | Phosphorylation | KTLSSFFTPRKPAVK CCHHHCCCCCCCCCC | 21.85 | 30266825 | |
240 | Sumoylation | TPRKPAVKKEVKEEE CCCCCCCCHHHHCCC | 45.37 | - | |
244 | Sumoylation | PAVKKEVKEEEPGAP CCCCHHHHCCCCCCC | 61.57 | - | |
244 | Sumoylation | PAVKKEVKEEEPGAP CCCCHHHHCCCCCCC | 61.57 | - | |
244 | Ubiquitination | PAVKKEVKEEEPGAP CCCCHHHHCCCCCCC | 61.57 | - | |
255 | Ubiquitination | PGAPGKEGAAEGPLD CCCCCCCCCCCCCCC | 33.31 | - | |
267 | Ubiquitination | PLDPSGYNPAKNNYH CCCCCCCCCCCCCCC | 33.31 | - | |
270 | Ubiquitination | PSGYNPAKNNYHPVE CCCCCCCCCCCCCCC | 47.16 | - | |
282 | Ubiquitination | PVEDACWKPGQKVPY CCCCCCCCCCCCCCE | 38.87 | - | |
286 | Ubiquitination | ACWKPGQKVPYLAVA CCCCCCCCCCEEEEE | 51.60 | - | |
298 | Ubiquitination | AVARTFEKIEEVSAR EEEECHHHHHHHHHH | 51.75 | - | |
303 | Phosphorylation | FEKIEEVSARLRMVE HHHHHHHHHHHHHHH | 15.79 | 26074081 | |
311 | Phosphorylation | ARLRMVETLSNLLRS HHHHHHHHHHHHHHH | 24.87 | 20068231 | |
313 | Phosphorylation | LRMVETLSNLLRSVV HHHHHHHHHHHHHHH | 32.62 | 20068231 | |
318 | Phosphorylation | TLSNLLRSVVALSPP HHHHHHHHHHHCCCC | 22.40 | 26074081 | |
323 | Phosphorylation | LRSVVALSPPDLLPV HHHHHHCCCCHHHHH | 25.34 | 26074081 | |
345 | Ubiquitination | LGPPQQGLELGVGDG CCCCCCCCCCCCCCH | 4.22 | - | |
376 | Ubiquitination | VRAEAAEKGDVGLVA HHHHHHHHCCCEEEE | 56.54 | - | |
376 | Ubiquitination | VRAEAAEKGDVGLVA HHHHHHHHCCCEEEE | 56.54 | 21906983 | |
393 | Sulfoxidation | SRSTQRLMLPPPPLT CCCCCCCCCCCCCCC | 6.02 | 21406390 | |
397 | Ubiquitination | QRLMLPPPPLTASGV CCCCCCCCCCCCCHH | 34.29 | - | |
406 | Phosphorylation | LTASGVFSKFRDIAR CCCCHHHHHHHHHHH | 28.60 | 20068231 | |
407 | Ubiquitination | TASGVFSKFRDIARL CCCHHHHHHHHHHHH | 32.71 | 21890473 | |
407 | Ubiquitination | TASGVFSKFRDIARL CCCHHHHHHHHHHHH | 32.71 | 21890473 | |
407 | Ubiquitination | TASGVFSKFRDIARL CCCHHHHHHHHHHHH | 32.71 | 21890473 | |
417 | Phosphorylation | DIARLTGSASTAKKI HHHHHHCCCHHHHHH | 17.51 | 24719451 | |
419 | Phosphorylation | ARLTGSASTAKKIDI HHHHCCCHHHHHHHH | 30.51 | 28851738 | |
420 | Phosphorylation | RLTGSASTAKKIDII HHHCCCHHHHHHHHH | 42.06 | 28851738 | |
422 | Ubiquitination | TGSASTAKKIDIIKG HCCCHHHHHHHHHHH | 50.80 | 21906983 | |
428 | Ubiquitination | AKKIDIIKGLFVACR HHHHHHHHHHHHHHC | 50.31 | - | |
437 | Phosphorylation | LFVACRHSEARFIAR HHHHHCCCHHHHHHH | 17.38 | 21712546 | |
445 | Phosphorylation | EARFIARSLSGRLRL HHHHHHHHHCCCHHH | 20.19 | 21712546 | |
447 | Phosphorylation | RFIARSLSGRLRLGL HHHHHHHCCCHHHCH | 24.10 | 21712546 | |
493 | Ubiquitination | GKTAEARKTWLEEQG CCCHHHHHHHHHHHC | 51.61 | - | |
506 | Phosphorylation | QGMILKQTFCEVPDL HCCEEEEEECCCCCH | 28.76 | 20860994 | |
510 | Ubiquitination | LKQTFCEVPDLDRII EEEEECCCCCHHHHH | 4.74 | - | |
525 | Ubiquitination | PVLLEHGLERLPEHC HHHHHCHHHHCHHHC | 3.60 | - | |
533 | Ubiquitination | ERLPEHCKLSPGIPL HHCHHHCCCCCCCCC | 54.64 | - | |
535 | Phosphorylation | LPEHCKLSPGIPLKP CHHHCCCCCCCCCCC | 13.43 | 20068231 | |
541 | Ubiquitination | LSPGIPLKPMLAHPT CCCCCCCCCCCCCCC | 24.03 | - | |
548 | Phosphorylation | KPMLAHPTRGISEVL CCCCCCCCCCHHHHH | 31.49 | 20068231 | |
552 | Phosphorylation | AHPTRGISEVLKRFE CCCCCCHHHHHHHHH | 25.20 | 23312004 | |
556 | Ubiquitination | RGISEVLKRFEEAAF CCHHHHHHHHHHHHC | 61.28 | - | |
568 | Ubiquitination | AAFTCEYKYDGQRAQ HHCEEEEEECCCEEE | 17.99 | - | |
585 | Ubiquitination | ALEGGEVKIFSRNQE EECCCEEEEEECCCC | 33.46 | - | |
597 | Acetylation | NQEDNTGKYPDIISR CCCCCCCCCCHHHHC | 52.12 | 25953088 | |
597 | Ubiquitination | NQEDNTGKYPDIISR CCCCCCCCCCHHHHC | 52.12 | - | |
599 | Ubiquitination | EDNTGKYPDIISRIP CCCCCCCCHHHHCCC | 29.79 | - | |
630 | Sumoylation | VAWDREKKQIQPFQV HCCHHHHCCCCCEEE | 48.13 | - | |
630 | Sumoylation | VAWDREKKQIQPFQV HCCHHHHCCCCCEEE | 48.13 | - | |
630 | Ubiquitination | VAWDREKKQIQPFQV HCCHHHHCCCCCEEE | 48.13 | - | |
639 | Phosphorylation | IQPFQVLTTRKRKEV CCCEEEEECCCCCCC | 26.21 | - | |
697 | Phosphorylation | EGEFVFATSLDTKDI CCEEEEEEECCHHCH | 20.54 | 28787133 | |
698 | Phosphorylation | GEFVFATSLDTKDIE CEEEEEEECCHHCHH | 22.33 | 28787133 | |
701 | Phosphorylation | VFATSLDTKDIEQIA EEEEECCHHCHHHHH | 35.59 | 28787133 | |
706 | Ubiquitination | LDTKDIEQIAEFLEQ CCHHCHHHHHHHHHH | 40.29 | - | |
713 | Ubiquitination | QIAEFLEQSVKDSCE HHHHHHHHHHHHHCC | 56.52 | - | |
714 | Phosphorylation | IAEFLEQSVKDSCEG HHHHHHHHHHHHCCC | 23.04 | 20068231 | |
737 | Ubiquitination | DATYEIAKRSHNWLK CCCHHHHHHCCCHHH | 61.16 | - | |
744 | Ubiquitination | KRSHNWLKLKKDYLD HHCCCHHHHCHHHHC | 50.29 | - | |
764 | Methylation | LDLVVIGAYLGRGKR EEEEEEEEHHCCCCC | 5.81 | - | |
764 | Ubiquitination | LDLVVIGAYLGRGKR EEEEEEEEHHCCCCC | 5.81 | - | |
795 | Methylation | EELQAICKLGTGFSD HHHHHHHHHCCCCCH | 43.78 | 23583077 | |
795 | Ubiquitination | EELQAICKLGTGFSD HHHHHHHHHCCCCCH | 43.78 | - | |
798 | Phosphorylation | QAICKLGTGFSDEEL HHHHHHCCCCCHHHH | 45.55 | 28450419 | |
801 | Phosphorylation | CKLGTGFSDEELEEH HHHCCCCCHHHHHHH | 45.52 | 23401153 | |
811 | Phosphorylation | ELEEHHQSLKALVLP HHHHHHHHHHHHHCC | 27.72 | 26074081 | |
813 | Ubiquitination | EEHHQSLKALVLPSP HHHHHHHHHHHCCCC | 44.94 | - | |
819 | Phosphorylation | LKALVLPSPRPYVRI HHHHHCCCCCCEEEE | 29.40 | 30266825 | |
823 | Phosphorylation | VLPSPRPYVRIDGAV HCCCCCCEEEECCEE | 12.02 | 22199227 | |
835 | Ubiquitination | GAVIPDHWLDPSAVW CEECCCCCCCHHHEE | 15.16 | - | |
866 | Acetylation | RGLVDSDKGISLRFP CCCCCCCCCCCCCCC | 63.19 | 25953088 | |
866 | Ubiquitination | RGLVDSDKGISLRFP CCCCCCCCCCCCCCC | 63.19 | - | |
888 | Phosphorylation | DKQPEQATTSAQVAC CCCCCCCCHHHHHHH | 22.45 | 26074081 | |
889 | Phosphorylation | KQPEQATTSAQVACL CCCCCCCHHHHHHHH | 25.69 | 26074081 | |
890 | Phosphorylation | QPEQATTSAQVACLY CCCCCCHHHHHHHHH | 16.61 | 26074081 | |
897 | Phosphorylation | SAQVACLYRKQSQIQ HHHHHHHHHHHHHHH | 18.69 | 26074081 | |
901 | Phosphorylation | ACLYRKQSQIQNQQG HHHHHHHHHHHHCCC | 32.08 | 22167270 | |
911 | Phosphorylation | QNQQGEDSGSDPEDT HHCCCCCCCCCCCCC | 35.57 | 22167270 | |
913 | Phosphorylation | QQGEDSGSDPEDTY- CCCCCCCCCCCCCC- | 54.68 | 22167270 | |
918 | Phosphorylation | SGSDPEDTY------ CCCCCCCCC------ | 29.48 | 22167270 | |
919 | Phosphorylation | GSDPEDTY------- CCCCCCCC------- | 28.95 | 22167270 |
Modified Location | Modified Residue | Modification | Type of Upstream Proteins | Gene Name of Upstream Proteins | UniProt AC of Upstream Proteins | Sources |
---|---|---|---|---|---|---|
51 | S | Phosphorylation | Kinase | CDK2 | P24941 | PSP |
66 | S | Phosphorylation | Kinase | CSNK2A1 | P68400 | GPS |
66 | S | Phosphorylation | Kinase | CK2-FAMILY | - | GPS |
66 | S | Phosphorylation | Kinase | CK2_GROUP | - | PhosphoELM |
76 | S | Phosphorylation | Kinase | CDK1 | P06493 | PSP |
76 | S | Phosphorylation | Kinase | CDK2 | P24941 | PSP |
76 | S | Phosphorylation | Kinase | CHEK1 | O14757 | GPS |
91 | S | Phosphorylation | Kinase | CDK2 | P24941 | PSP |
233 | T | Phosphorylation | Kinase | CDK2 | P24941 | PSP |
Modified Location | Modified Residue | Modification | Function | Reference | ||
---|---|---|---|---|---|---|
Oops, there are no descriptions of PTM sites of DNLI1_HUMAN !! |
* Distance = the distance between SAP position and PTM sites.
Modified Location | Modification | Variant Position (Distance <= 10) |
Residue Change | SAP | Related Disease | Reference |
---|---|---|---|---|---|---|
Oops, there are no SNP-PTM records of DNLI1_HUMAN !! |
Interacting Protein | Gene Name | Interaction Type | PPI Reference | Domain-Domain Interactions |
---|---|---|---|---|
MRE11_HUMAN | MRE11A | physical | 8530104 | |
CTF18_HUMAN | CHTF18 | physical | 26344197 | |
FEN1_HUMAN | FEN1 | physical | 26344197 | |
STKL1_HUMAN | STKLD1 | physical | 26344197 | |
UHRF1_HUMAN | UHRF1 | physical | 28803780 |
Kegg Disease | |
---|---|
There are no disease associations of PTM sites. | |
OMIM Disease | |
There are no disease associations of PTM sites. | |
Kegg Drug | |
There are no disease associations of PTM sites. | |
DrugBank | |
DB00290 | Bleomycin |
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Phosphorylation | |
Reference | PubMed |
"Quantitative phosphoproteomic analysis of T cell receptor signalingreveals system-wide modulation of protein-protein interactions."; Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K.,Rodionov V., Han D.K.; Sci. Signal. 2:RA46-RA46(2009). Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-49; SER-51; SER-66;SER-76; SER-141; THR-195; SER-201; SER-229; THR-233; SER-911 ANDSER-913, AND MASS SPECTROMETRY. | |
"A quantitative atlas of mitotic phosphorylation."; Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E.,Elledge S.J., Gygi S.P.; Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008). Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-51; SER-66; SER-76;SER-141; THR-195; SER-201; THR-233; SER-911 AND SER-913, AND MASSSPECTROMETRY. | |
"Automated phosphoproteome analysis for cultured cancer cells by two-dimensional nanoLC-MS using a calcined titania/C18 biphasic column."; Imami K., Sugiyama N., Kyono Y., Tomita M., Ishihama Y.; Anal. Sci. 24:161-166(2008). Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-49; SER-51 AND SER-141,AND MASS SPECTROMETRY. | |
"Quantitative phosphoproteome profiling of Wnt3a-mediated signalingnetwork: indicating the involvement of ribonucleoside-diphosphatereductase M2 subunit phosphorylation at residue serine 20 in canonicalWnt signal transduction."; Tang L.-Y., Deng N., Wang L.-S., Dai J., Wang Z.-L., Jiang X.-S.,Li S.-J., Li L., Sheng Q.-H., Wu D.-Q., Li L., Zeng R.; Mol. Cell. Proteomics 6:1952-1967(2007). Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-66 AND SER-76, AND MASSSPECTROMETRY. | |
"Improved titanium dioxide enrichment of phosphopeptides from HeLacells and high confident phosphopeptide identification by cross-validation of MS/MS and MS/MS/MS spectra."; Yu L.-R., Zhu Z., Chan K.C., Issaq H.J., Dimitrov D.S., Veenstra T.D.; J. Proteome Res. 6:4150-4162(2007). Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-230, AND MASSSPECTROMETRY. | |
"A probability-based approach for high-throughput proteinphosphorylation analysis and site localization."; Beausoleil S.A., Villen J., Gerber S.A., Rush J., Gygi S.P.; Nat. Biotechnol. 24:1285-1292(2006). Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-51; SER-66; SER-76;THR-195 AND THR-233, AND MASS SPECTROMETRY. | |
"Global, in vivo, and site-specific phosphorylation dynamics insignaling networks."; Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P.,Mann M.; Cell 127:635-648(2006). Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-49; SER-66; SER-76;SER-141; THR-195; SER-201 AND THR-233, AND MASS SPECTROMETRY. | |
"Large-scale characterization of HeLa cell nuclear phosphoproteins."; Beausoleil S.A., Jedrychowski M., Schwartz D., Elias J.E., Villen J.,Li J., Cohn M.A., Cantley L.C., Gygi S.P.; Proc. Natl. Acad. Sci. U.S.A. 101:12130-12135(2004). Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-66; SER-76; SER-141;THR-195 AND SER-911, AND MASS SPECTROMETRY. | |
"Combining protein-based IMAC, peptide-based IMAC, and MudPIT forefficient phosphoproteomic analysis."; Cantin G.T., Yi W., Lu B., Park S.K., Xu T., Lee J.-D.,Yates J.R. III; J. Proteome Res. 7:1346-1351(2008). Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-233, AND MASSSPECTROMETRY. | |
Ubiquitylation | |
Reference | PubMed |
"Proteomic analysis of ubiquitinated proteins in normal hepatocytecell line Chang liver cells."; Tan F., Lu L., Cai Y., Wang J., Xie Y., Wang L., Gong Y., Xu B.-E.,Wu J., Luo Y., Qiang B., Yuan J., Sun X., Peng X.; Proteomics 8:2885-2896(2008). Cited for: UBIQUITINATION [LARGE SCALE ANALYSIS] AT LYS-422, AND MASSSPECTROMETRY. |