DHE3_HUMAN - dbPTM
DHE3_HUMAN - PTM Information in dbPTM
Basic Information of Protein
UniProt ID DHE3_HUMAN
UniProt AC P00367
Protein Name Glutamate dehydrogenase 1, mitochondrial
Gene Name GLUD1
Organism Homo sapiens (Human).
Sequence Length 558
Subcellular Localization Mitochondrion matrix.
Protein Description Mitochondrial glutamate dehydrogenase that converts L-glutamate into alpha-ketoglutarate. Plays a key role in glutamine anaplerosis by producing alpha-ketoglutarate, an important intermediate in the tricarboxylic acid cycle. May be involved in learning and memory reactions by increasing the turnover of the excitatory neurotransmitter glutamate (By similarity)..
Protein Sequence MYRYLGEALLLSRAGPAALGSASADSAALLGWARGQPAAAPQPGLALAARRHYSEAVADREDDPNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQKRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFKLQHGSILGFPKAKPYEGSILEADCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSNYHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTAAYVNAIEKVFKVYNEAGVTFT
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure
ASA (%) Reference Orthologous
Protein Cluster
2Phosphorylation------MYRYLGEAL
------CCCCHHHHH
14.1530206219
4Phosphorylation----MYRYLGEALLL
----CCCCHHHHHHH
11.1130206219
12PhosphorylationLGEALLLSRAGPAAL
HHHHHHHHCCCCCHH
21.7630206219
16UbiquitinationLLLSRAGPAALGSAS
HHHHCCCCCHHCCCC
17.24-
20UbiquitinationRAGPAALGSASADSA
CCCCCHHCCCCHHHH
19.21-
21PhosphorylationAGPAALGSASADSAA
CCCCHHCCCCHHHHH
21.6522210691
24UbiquitinationAALGSASADSAALLG
CHHCCCCHHHHHHHH
17.9421890473
29UbiquitinationASADSAALLGWARGQ
CCHHHHHHHHHHCCC
4.5521890473
33UbiquitinationSAALLGWARGQPAAA
HHHHHHHHCCCCCCC
12.1521890473
44UbiquitinationPAAAPQPGLALAARR
CCCCCCCCHHHHHHH
20.5221890473
45UbiquitinationAAAPQPGLALAARRH
CCCCCCCHHHHHHHH
4.4921890473
58UbiquitinationRHYSEAVADREDDPN
HHHHHHHCCCCCCCC
19.7221890473
67UbiquitinationREDDPNFFKMVEGFF
CCCCCCHHHHHHCHH
6.7521890473
68AcetylationEDDPNFFKMVEGFFD
CCCCCHHHHHHCHHH
37.5930582663
68SuccinylationEDDPNFFKMVEGFFD
CCCCCHHHHHHCHHH
37.59-
68SuccinylationEDDPNFFKMVEGFFD
CCCCCHHHHHHCHHH
37.59-
69SulfoxidationDDPNFFKMVEGFFDR
CCCCHHHHHHCHHHC
2.5421406390
76MethylationMVEGFFDRGASIVED
HHHCHHHCCCHHHHH
37.10-
78UbiquitinationEGFFDRGASIVEDKL
HCHHHCCCHHHHHHH
9.2921890473
79UbiquitinationGFFDRGASIVEDKLV
CHHHCCCHHHHHHHH
29.9521890473
79PhosphorylationGFFDRGASIVEDKLV
CHHHCCCHHHHHHHH
29.9525072903
842-HydroxyisobutyrylationGASIVEDKLVEDLRT
CCHHHHHHHHHHHHC
40.71-
84AcetylationGASIVEDKLVEDLRT
CCHHHHHHHHHHHHC
40.7119608861
84SuccinylationGASIVEDKLVEDLRT
CCHHHHHHHHHHHHC
40.71-
84SuccinylationGASIVEDKLVEDLRT
CCHHHHHHHHHHHHC
40.7121890473
84UbiquitinationGASIVEDKLVEDLRT
CCHHHHHHHHHHHHC
40.7121890473
98AcetylationTRESEEQKRNRVRGI
CCCCHHHHHHHHHHH
55.726570497
110AcetylationRGILRIIKPCNHVLS
HHHHHHHHCCCEEEE
40.94-
110SuccinylationRGILRIIKPCNHVLS
HHHHHHHHCCCEEEE
40.94-
110SuccinylationRGILRIIKPCNHVLS
HHHHHHHHCCCEEEE
40.94-
112S-nitrosylationILRIIKPCNHVLSLS
HHHHHHCCCEEEEEE
4.7024105792
128PhosphorylationPIRRDDGSWEVIEGY
EEECCCCCEEEEEEE
27.3623927012
135PhosphorylationSWEVIEGYRAQHSQH
CEEEEEEEECCCCCC
7.0323927012
1472-HydroxyisobutyrylationSQHRTPCKGGIRYST
CCCCCCCCCCCCCCC
62.47-
152PhosphorylationPCKGGIRYSTDVSVD
CCCCCCCCCCCCCHH
17.6328152594
153PhosphorylationCKGGIRYSTDVSVDE
CCCCCCCCCCCCHHH
14.3228152594
154PhosphorylationKGGIRYSTDVSVDEV
CCCCCCCCCCCHHHH
31.3323927012
157PhosphorylationIRYSTDVSVDEVKAL
CCCCCCCCHHHHHHH
27.0223927012
159UbiquitinationYSTDVSVDEVKALAS
CCCCCCHHHHHHHHH
47.68-
162AcetylationDVSVDEVKALASLMT
CCCHHHHHHHHHHHH
35.3220167786
162SuccinylationDVSVDEVKALASLMT
CCCHHHHHHHHHHHH
35.32-
162SuccinylationDVSVDEVKALASLMT
CCCHHHHHHHHHHHH
35.3227452117
162UbiquitinationDVSVDEVKALASLMT
CCCHHHHHHHHHHHH
35.3221890473
170PhosphorylationALASLMTYKCAVVDV
HHHHHHHCEEEEEEC
7.07-
171AcetylationLASLMTYKCAVVDVP
HHHHHHCEEEEEECC
13.42-
171MethylationLASLMTYKCAVVDVP
HHHHHHCEEEEEECC
13.42-
172ADP-ribosylationASLMTYKCAVVDVPF
HHHHHCEEEEEECCC
2.15-
172ADP-ribosylationASLMTYKCAVVDVPF
HHHHHCEEEEEECCC
2.1516023112
179AcetylationCAVVDVPFGGAKAGV
EEEEECCCCCCCCCC
16.51-
183AcetylationDVPFGGAKAGVKINP
ECCCCCCCCCCCCCC
49.28-
183SuccinylationDVPFGGAKAGVKINP
ECCCCCCCCCCCCCC
49.28-
183SuccinylationDVPFGGAKAGVKINP
ECCCCCCCCCCCCCC
49.28-
183SumoylationDVPFGGAKAGVKINP
ECCCCCCCCCCCCCC
49.28-
183UbiquitinationDVPFGGAKAGVKINP
ECCCCCCCCCCCCCC
49.28-
185UbiquitinationPFGGAKAGVKINPKN
CCCCCCCCCCCCCCC
22.1221890473
187AcetylationGGAKAGVKINPKNYT
CCCCCCCCCCCCCCC
35.5325953088
187UbiquitinationGGAKAGVKINPKNYT
CCCCCCCCCCCCCCC
35.53-
191AcetylationAGVKINPKNYTDNEL
CCCCCCCCCCCHHHH
59.0925953088
191SuccinylationAGVKINPKNYTDNEL
CCCCCCCCCCCHHHH
59.09-
191SuccinylationAGVKINPKNYTDNEL
CCCCCCCCCCCHHHH
59.0927452117
191UbiquitinationAGVKINPKNYTDNEL
CCCCCCCCCCCHHHH
59.09-
193PhosphorylationVKINPKNYTDNELEK
CCCCCCCCCHHHHHH
22.9228152594
194PhosphorylationKINPKNYTDNELEKI
CCCCCCCCHHHHHHH
41.56-
198UbiquitinationKNYTDNELEKITRRF
CCCCHHHHHHHHHHH
11.57-
2002-HydroxyisobutyrylationYTDNELEKITRRFTM
CCHHHHHHHHHHHHH
63.10-
200SuccinylationYTDNELEKITRRFTM
CCHHHHHHHHHHHHH
63.10-
200SuccinylationYTDNELEKITRRFTM
CCHHHHHHHHHHHHH
63.1021890473
200UbiquitinationYTDNELEKITRRFTM
CCHHHHHHHHHHHHH
63.10-
206PhosphorylationEKITRRFTMELAKKG
HHHHHHHHHHHHHCC
14.13-
2112-HydroxyisobutyrylationRFTMELAKKGFIGPG
HHHHHHHHCCCCCCC
67.08-
211AcetylationRFTMELAKKGFIGPG
HHHHHHHHCCCCCCC
67.087623875
211UbiquitinationRFTMELAKKGFIGPG
HHHHHHHHCCCCCCC
67.0821890473
212UbiquitinationFTMELAKKGFIGPGI
HHHHHHHCCCCCCCC
54.1421890473
219UbiquitinationKGFIGPGIDVPAPDM
CCCCCCCCCCCCCCC
5.6321890473
226SulfoxidationIDVPAPDMSTGEREM
CCCCCCCCCCCHHHH
3.6321406390
227PhosphorylationDVPAPDMSTGEREMS
CCCCCCCCCCHHHHH
40.4128857561
228PhosphorylationVPAPDMSTGEREMSW
CCCCCCCCCHHHHHH
36.1028857561
232UbiquitinationDMSTGEREMSWIADT
CCCCCHHHHHHHHHH
33.0121890473
248AcetylationASTIGHYDINAHACV
HHHCCCCEECCCEEE
23.22-
248UbiquitinationASTIGHYDINAHACV
HHHCCCCEECCCEEE
23.2221890473
290AcetylationFINEASYMSILGMTP
HHCHHHHHHHHCCCC
1.54-
290UbiquitinationFINEASYMSILGMTP
HHCHHHHHHHHCCCC
1.54-
302MethylationMTPGFGDKTFVVQGF
CCCCCCCCEEEEECC
44.21-
313AcetylationVQGFGNVGLHSMRYL
EECCCCCCHHHHHHH
22.98-
313UbiquitinationVQGFGNVGLHSMRYL
EECCCCCCHHHHHHH
22.98-
316PhosphorylationFGNVGLHSMRYLHRF
CCCCCHHHHHHHHHC
15.2527251275
326AcetylationYLHRFGAKCIAVGES
HHHHCCCEEEEECCC
26.93-
326UbiquitinationYLHRFGAKCIAVGES
HHHHCCCEEEEECCC
26.93-
333PhosphorylationKCIAVGESDGSIWNP
EEEEECCCCCCCCCC
41.1525072903
336AcetylationAVGESDGSIWNPDGI
EECCCCCCCCCCCCC
29.44-
336UbiquitinationAVGESDGSIWNPDGI
EECCCCCCCCCCCCC
29.4421890473
336PhosphorylationAVGESDGSIWNPDGI
EECCCCCCCCCCCCC
29.4425072903
346AcetylationNPDGIDPKELEDFKL
CCCCCCHHHHHHHCC
71.7923236377
346SuccinylationNPDGIDPKELEDFKL
CCCCCCHHHHHHHCC
71.79-
346SuccinylationNPDGIDPKELEDFKL
CCCCCCHHHHHHHCC
71.79-
3522-HydroxyisobutyrylationPKELEDFKLQHGSIL
HHHHHHHCCCCCCCC
60.61-
352AcetylationPKELEDFKLQHGSIL
HHHHHHHCCCCCCCC
60.6126822725
352SuccinylationPKELEDFKLQHGSIL
HHHHHHHCCCCCCCC
60.61-
352SuccinylationPKELEDFKLQHGSIL
HHHHHHHCCCCCCCC
60.6121890473
352UbiquitinationPKELEDFKLQHGSIL
HHHHHHHCCCCCCCC
60.61-
357PhosphorylationDFKLQHGSILGFPKA
HHCCCCCCCCCCCCC
16.7123312004
360AcetylationLQHGSILGFPKAKPY
CCCCCCCCCCCCCCC
34.83-
360UbiquitinationLQHGSILGFPKAKPY
CCCCCCCCCCCCCCC
34.83-
363AcetylationGSILGFPKAKPYEGS
CCCCCCCCCCCCCCC
67.77-
363SuccinylationGSILGFPKAKPYEGS
CCCCCCCCCCCCCCC
67.77-
363SuccinylationGSILGFPKAKPYEGS
CCCCCCCCCCCCCCC
67.77-
363UbiquitinationGSILGFPKAKPYEGS
CCCCCCCCCCCCCCC
67.77-
365AcetylationILGFPKAKPYEGSIL
CCCCCCCCCCCCCCE
55.01-
365SuccinylationILGFPKAKPYEGSIL
CCCCCCCCCCCCCCE
55.01-
365SuccinylationILGFPKAKPYEGSIL
CCCCCCCCCCCCCCE
55.0121890473
365UbiquitinationILGFPKAKPYEGSIL
CCCCCCCCCCCCCCE
55.0121890473
367PhosphorylationGFPKAKPYEGSILEA
CCCCCCCCCCCCEEE
32.0125850435
370PhosphorylationKAKPYEGSILEADCD
CCCCCCCCCEEECCC
16.4425850435
376GlutathionylationGSILEADCDILIPAA
CCCEEECCCEEEECC
4.5222555962
378UbiquitinationILEADCDILIPAASE
CEEECCCEEEECCCH
4.7721890473
384PhosphorylationDILIPAASEKQLTKS
CEEEECCCHHHCCCC
47.6425850435
386AcetylationLIPAASEKQLTKSNA
EEECCCHHHCCCCCC
48.38-
386UbiquitinationLIPAASEKQLTKSNA
EEECCCHHHCCCCCC
48.38-
390AcetylationASEKQLTKSNAPRVK
CCHHHCCCCCCCHHE
50.7525953088
390SuccinylationASEKQLTKSNAPRVK
CCHHHCCCCCCCHHE
50.75-
390SuccinylationASEKQLTKSNAPRVK
CCHHHCCCCCCCHHE
50.7527452117
390UbiquitinationASEKQLTKSNAPRVK
CCHHHCCCCCCCHHE
50.75-
391PhosphorylationSEKQLTKSNAPRVKA
CHHHCCCCCCCHHEE
32.7529116813
399AcetylationNAPRVKAKIIAEGAN
CCCHHEEEEEECCCC
29.00-
399UbiquitinationNAPRVKAKIIAEGAN
CCCHHEEEEEECCCC
29.0021890473
409PhosphorylationAEGANGPTTPEADKI
ECCCCCCCCHHHHHH
57.2830266825
410PhosphorylationEGANGPTTPEADKIF
CCCCCCCCHHHHHHH
23.4330266825
415UbiquitinationPTTPEADKIFLERNI
CCCHHHHHHHHHCCE
42.2621890473
4152-HydroxyisobutyrylationPTTPEADKIFLERNI
CCCHHHHHHHHHCCE
42.26-
415AcetylationPTTPEADKIFLERNI
CCCHHHHHHHHHCCE
42.2623236377
415SuccinylationPTTPEADKIFLERNI
CCCHHHHHHHHHCCE
42.26-
415SuccinylationPTTPEADKIFLERNI
CCCHHHHHHHHHCCE
42.2621890473
415UbiquitinationPTTPEADKIFLERNI
CCCHHHHHHHHHCCE
42.2621890473
438PhosphorylationNAGGVTVSYFEWLKN
CCCCEEEEHHHHHHC
18.10-
439PhosphorylationAGGVTVSYFEWLKNL
CCCEEEEHHHHHHCC
10.94-
450PhosphorylationLKNLNHVSYGRLTFK
HHCCCCCEEEEEEEE
17.8323401153
451PhosphorylationKNLNHVSYGRLTFKY
HCCCCCEEEEEEEEE
12.7428450419
457N6-malonyllysineSYGRLTFKYERDSNY
EEEEEEEEEECCCCC
40.75-
4572-HydroxyisobutyrylationSYGRLTFKYERDSNY
EEEEEEEEEECCCCC
40.75-
457AcetylationSYGRLTFKYERDSNY
EEEEEEEEEECCCCC
40.7525825284
457MalonylationSYGRLTFKYERDSNY
EEEEEEEEEECCCCC
40.7526320211
457SuccinylationSYGRLTFKYERDSNY
EEEEEEEEEECCCCC
40.7527452117
457UbiquitinationSYGRLTFKYERDSNY
EEEEEEEEEECCCCC
40.75-
458PhosphorylationYGRLTFKYERDSNYH
EEEEEEEEECCCCCE
16.4128152594
462PhosphorylationTFKYERDSNYHLLMS
EEEEECCCCCEEEEE
45.5728857561
464PhosphorylationKYERDSNYHLLMSVQ
EEECCCCCEEEEEHH
9.5928857561
477AcetylationVQESLERKFGKHGGT
HHHHHHHHHHCCCCC
49.4425953088
477SuccinylationVQESLERKFGKHGGT
HHHHHHHHHHCCCCC
49.44-
477SuccinylationVQESLERKFGKHGGT
HHHHHHHHHHCCCCC
49.44-
480AcetylationSLERKFGKHGGTIPI
HHHHHHHCCCCCCCC
42.0619608861
480MalonylationSLERKFGKHGGTIPI
HHHHHHHCCCCCCCC
42.0626320211
480SuccinylationSLERKFGKHGGTIPI
HHHHHHHCCCCCCCC
42.06-
480SuccinylationSLERKFGKHGGTIPI
HHHHHHHCCCCCCCC
42.06-
480UbiquitinationSLERKFGKHGGTIPI
HHHHHHHCCCCCCCC
42.0619608861
496MethylationPTAEFQDRISGASEK
CCHHHHHHCCCCCHH
17.75-
498PhosphorylationAEFQDRISGASEKDI
HHHHHHCCCCCHHHH
29.2427251275
501PhosphorylationQDRISGASEKDIVHS
HHHCCCCCHHHHCHH
49.0228857561
503N6-malonyllysineRISGASEKDIVHSGL
HCCCCCHHHHCHHHH
50.70-
5032-HydroxyisobutyrylationRISGASEKDIVHSGL
HCCCCCHHHHCHHHH
50.70-
503AcetylationRISGASEKDIVHSGL
HCCCCCHHHHCHHHH
50.7019608861
503MalonylationRISGASEKDIVHSGL
HCCCCCHHHHCHHHH
50.7026320211
503SuccinylationRISGASEKDIVHSGL
HCCCCCHHHHCHHHH
50.70-
503UbiquitinationRISGASEKDIVHSGL
HCCCCCHHHHCHHHH
50.7019608861
508PhosphorylationSEKDIVHSGLAYTME
CHHHHCHHHHHHHHH
25.3020068231
512PhosphorylationIVHSGLAYTMERSAR
HCHHHHHHHHHHHHH
16.2127259358
513PhosphorylationVHSGLAYTMERSARQ
CHHHHHHHHHHHHHH
13.6226356563
527N6-malonyllysineQIMRTAMKYNLGLDL
HHHHHHHHHCCCCCH
28.64-
527AcetylationQIMRTAMKYNLGLDL
HHHHHHHHHCCCCCH
28.6423954790
527MalonylationQIMRTAMKYNLGLDL
HHHHHHHHHCCCCCH
28.6426320211
527SuccinylationQIMRTAMKYNLGLDL
HHHHHHHHHCCCCCH
28.64-
527UbiquitinationQIMRTAMKYNLGLDL
HHHHHHHHHCCCCCH
28.6421890473
528PhosphorylationIMRTAMKYNLGLDLR
HHHHHHHHCCCCCHH
11.52-
539PhosphorylationLDLRTAAYVNAIEKV
CCHHHHHHHHHHHHH
7.5628152594
5452-HydroxyisobutyrylationAYVNAIEKVFKVYNE
HHHHHHHHHHHHHHH
47.02-
545AcetylationAYVNAIEKVFKVYNE
HHHHHHHHHHHHHHH
47.0219608861
545SuccinylationAYVNAIEKVFKVYNE
HHHHHHHHHHHHHHH
47.02-
545SuccinylationAYVNAIEKVFKVYNE
HHHHHHHHHHHHHHH
47.0221890473
545UbiquitinationAYVNAIEKVFKVYNE
HHHHHHHHHHHHHHH
47.0221890473
548AcetylationNAIEKVFKVYNEAGV
HHHHHHHHHHHHCCC
46.9625038526
550PhosphorylationIEKVFKVYNEAGVTF
HHHHHHHHHHCCCCC
14.10-

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of DHE3_HUMAN !!

Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of DHE3_HUMAN !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10)
Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of DHE3_HUMAN !!

Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions
A1AG1_HUMANORM1physical
21988832
NR4A1_HUMANNR4A1physical
21988832
HEMO_HUMANHPXphysical
21988832
STA5A_HUMANSTAT5Aphysical
21988832
SEC62_HUMANSEC62physical
21988832
VTNC_HUMANVTNphysical
21988832

Regulatory Network of DHE3_HUMAN

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Related Literatures of Post-Translational Modification
Acetylation
ReferencePubMed
"Lysine acetylation targets protein complexes and co-regulates majorcellular functions.";
Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T.,Olsen J.V., Mann M.;
Science 325:834-840(2009).
Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-84; LYS-480 AND LYS-503, ANDMASS SPECTROMETRY.
Phosphorylation
ReferencePubMed
"Quantitative phosphoproteomic analysis of T cell receptor signalingreveals system-wide modulation of protein-protein interactions.";
Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K.,Rodionov V., Han D.K.;
Sci. Signal. 2:RA46-RA46(2009).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-128, AND MASSSPECTROMETRY.
"Lys-N and trypsin cover complementary parts of the phosphoproteome ina refined SCX-based approach.";
Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J.,Mohammed S.;
Anal. Chem. 81:4493-4501(2009).
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-410, AND MASSSPECTROMETRY.

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