Calculate RMSD and Structure Alignment by TM-align

Structure Alignment Data

SNC Protein Chain Resolution [Å] Same SEQ Protein Chain Resolution [Å] Length RMSD TM-score 9Å of RMSD Show
1BUWB1.91DXTB1.71410.960.956311.07View
2HXKA1.652IFQB1.21040.440.968550.26View
2Y33A24BQWA1.792160.320.991990.14View
3V4NA1.63V4XA1.953870.640.991940.18View
2LLTANMR2LLUANMR931.780.824821.18View

References and Notes

TM-score Interpretation:
0.0 < TM-score < 0.30, random structural similarity
0.5 < TM-score < 1.00, in about the same fold

Reference:
Y. Zhang, J. Skolnick, TM-align: A protein structure alignment algorithm based on TM-score, Nucleic Acids Research, 2005 33: 2302-2309.

RMSD: Root-mean-square deviation.