YRF13_YEAST - dbPTM
YRF13_YEAST - PTM Information in dbPTM
Basic Information of Protein
UniProt ID YRF13_YEAST
UniProt AC P0CX14
Protein Name Y' element ATP-dependent helicase protein 1 copy 3
Gene Name YRF1-3
Organism Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
Sequence Length 1859
Subcellular Localization
Protein Description Catalyzes DNA unwinding and is involved in telomerase-independent telomere maintenance..
Protein Sequence MEIENEQICTCIAQILHLLNSLIITFLDDDKTETGQSFVYIDGFLVKKHNNQHTIVNFETYKNKMKVSDRRKFEKANFDEFESALNNKNDLVHCPSITLFESIPTEVRSFYEDEKSGLIKVVKFRTGAMDRKRSFEKIVVSVMVGKNVQKFLTFVEDEPDFQGGPIPSKYLIPKKINLMVYTLFQVHTLKFNRKDYDTLSLFYLNRGYYNELSFRVLERCYEIASARPNDSSTMRTFTDFVSGTPIVRGLQKSTIRKYGYNLAPYMFLLLHVDELSIFSAYQASLPGEKKVDTERLKRDLCPRKPTEIKYFSQICNDMMNKKDRLGDILHIILRACALNFGAGPRGGAGDEEDRSITNEEPIIPSVDEHGLKVCKLRSPNTPRRLRKTLDAVKALLVSSCACTARDLDIFDDNNGVAMWKWIKILYHEVAQETALKDSYRITLVPSSDGVSVCGKLFNREYVRGFYFACKAQFDNLWEELNDCFYMPTVVDIASLILRNREVLFREPKRGIDEYLENDSFLQMIPVKYREIVLPKLRRDTNKMTAALKNKVTVAIDELTVPLMWMIHFAVGYPYRYPELQLLAFAGPQRNVYVDDTTRRIQLYTDYNKNGSSEPRLKTLDGLTSDYVFYFVTVLRQMQICALGNSYDAFNHDPWMDVVGFEDPDQVTNRDISRIVLYSYMFLNTAKGCLVEYATFRQYMRELPKNAPQKLNFREMRQGLIALGRHCVGSRFETDLYESATSELMANHSVQTGRNIYGVDSFSLTSVSGTTATLLQERASERWIQWLGLESDYHCSFSSTRNAEDVVAGEAASSDHHQKISRVTRKRPREPKSTNDILVAGQKLFGSSFEFRDLHQLRLCHEIYMADTPSVAVQAPPGYGKTELFHLPLIALASKGDVKYVSFLFVPYTVLLANCMIRLSRCGCLNVAPVRNFIEEGCDGVTDLYVGIYDDLASTNFTDRIAAWENIVECTFRTNNVKLGYLIVDEFHNFETEVYRQSQFGGITNLDFDAFEKAIFLSGTAPEAVADAALQRIGLTGLAKKSMDINELKRSEDLSRGLSSYPTRMFNLIKEKSEVPLGHVHKIWKKVESQPEEALKLLLALFEIEPESKAIVVASTTNEVEELACSWRKYFRVVWIHGKLGAAEKVSRTKEFVTDGSMRVLIGTKLVTEGIDIKQLMMVIMLDNRLNIIELIQGVGRLRDGGLCYLLSRKNSWAARNRKGELPPIKEGCITEQVREFYGLESKKGKKGQHVGCCGSRTDLSADTVELIERMDRLAEKQATASMSIVALPSSFQESNSSDRCRKYCSSDEDSDTCIHGSANASTNATTNSSTNATTTASTNVRTSATTTASINVRTSATTTESTNSSTNATTTASTNVRTSATTTASINVRTSATTTESTNSNTSATTTESTDSNTSATTTESTDSNTSATTTASTNSSTNATTTASTNSSTNATTTESTNASAKEDANKDGNAEDNRFHPVTDINKESYKRKGSQMVLLERKKLKAQFPNTSENMNVLQFLGFRSDEIKHLFLYGIDVYFCPEGVFTQYGLCKGCQKMFELCVCWAGQKVSYRRMAWEALAVERMLRNDEEYKEYLEDIEPYHGDPVGYLKYFSVKRGEIYSQIQRNYAWYLAITRRRETISVLDSTRGKQGSQVFRMSGRQIKELYYKVWSNLRESKTEVLQYFLNWDEKKCREEWEAKDDTVFVEALEKVGVFQRLRSMTSAGLQGPQYVKLQFSRHHRQLRSRYELSLGMHLRDQLALGVTPSKVPHWTAFLSMLIGLFCNKTFRQKLEYLLEQISEVWLLPHWLDLANVEVLAADNTRVPLYMLMVAVHKELDSDDVPDGRFDILLCRDSSREVGE
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure		 ASA (%) Reference Orthologous
Protein Cluster
355PhosphorylationAGDEEDRSITNEEPI
CCCHHHCCCCCCCCC		46.1919779198
438PhosphorylationQETALKDSYRITLVP
HHHHCCCCEEEEEEE		18.0927017623
439PhosphorylationETALKDSYRITLVPS
HHHCCCCEEEEEEEC		19.0327017623
760PhosphorylationRNIYGVDSFSLTSVS
CCEECCCCCEEEECC		17.8327214570
767PhosphorylationSFSLTSVSGTTATLL
CCEEEECCCCHHHHH		30.1427214570
1211PhosphorylationYLLSRKNSWAARNRK
EEEECCCCHHHHCCC		22.5627214570
1294PhosphorylationLPSSFQESNSSDRCR
CCCCCCCCCCCHHHH		31.0928889911
1296PhosphorylationSSFQESNSSDRCRKY
CCCCCCCCCHHHHHH		42.7828889911
1297PhosphorylationSFQESNSSDRCRKYC
CCCCCCCCHHHHHHC		33.0728889911
1337PhosphorylationTNATTTASTNVRTSA
CCCEECCCCEEECCE		20.5828889911
1342PhosphorylationTASTNVRTSATTTAS
CCCCEEECCEEEEEE		20.5927017623
1347PhosphorylationVRTSATTTASINVRT
EECCEEEEEEEEEEC		17.6627017623
1364PhosphorylationTTTESTNSSTNATTT
EECCCCCCCCCCEEE		38.3329688323
1365PhosphorylationTTESTNSSTNATTTA
ECCCCCCCCCCEEEE		27.9629688323
1366PhosphorylationTESTNSSTNATTTAS
CCCCCCCCCCEEEEE		28.7929688323
1369PhosphorylationTNSSTNATTTASTNV
CCCCCCCEEEEECCE		27.0929688323
1370PhosphorylationNSSTNATTTASTNVR
CCCCCCEEEEECCEE		20.2529688323
1371PhosphorylationSSTNATTTASTNVRT
CCCCCEEEEECCEEC		17.7929688323
1373PhosphorylationTNATTTASTNVRTSA
CCCEEEEECCEECCE		20.5828889911
1374PhosphorylationNATTTASTNVRTSAT
CCEEEEECCEECCEE		34.9629688323
1378PhosphorylationTASTNVRTSATTTAS
EEECCEECCEEEEEE		20.5927017623
1383PhosphorylationVRTSATTTASINVRT
EECCEEEEEEEEEEE		17.6627017623
1453PhosphorylationTNSSTNATTTESTNA
CCCCCCCCCCCCCCC		36.0027017623
1455PhosphorylationSSTNATTTESTNASA
CCCCCCCCCCCCCHH		24.4727017623
1458PhosphorylationNATTTESTNASAKED
CCCCCCCCCCHHCHH		28.6827017623
1493PhosphorylationESYKRKGSQMVLLER
HHHHCCCCEEEEEEH		20.3825752575
1719PhosphorylationGVFQRLRSMTSAGLQ
CHHHHHHHCCCCCCC		30.8827017623
1730PhosphorylationAGLQGPQYVKLQFSR
CCCCCCCEEEEEECH		11.5927017623
Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of YRF13_YEAST !!
Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of YRF13_YEAST !!
Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10) 		Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of YRF13_YEAST !!
Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions

Oops, there are no PPI records of YRF13_YEAST !!
Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of YRF13_YEAST

loading...

Related Literatures of Post-Translational Modification

TOP
© 2024 Institute of Bioinformatics and Systems Biology, NYCU | Designed by : BiOmics Laboratory