dbPTM

TRNL_SCHPO - PTM Information in dbPTM

Basic Information of Protein

Overview of Protein Modification Sites with Functional and Structural Information
UniProt ID	TRNL_SCHPO
UniProt AC	Q10313
Protein Name	tRNA ligase 1
Gene Name	trl1
Organism	Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
Sequence Length	787
Subcellular Localization	Cytoplasm .
Protein Description	Required for the splicing of precursor tRNA molecules containing introns. The ligation activity requires three enzymatic activities: phosphorylation of the 5' terminus of the 3' half-tRNA in the presence of ATP, opening of the 2'3'-cyclic phosphodiester bond of the 5' half-tRNA leaving a 2'-phosphomonoester and ligation of the two tRNA halves in an ATP-dependent reaction..
Protein Sequence	MTRDQRVCIFGEKKSTVRSVTFKAPKSNYDLTSWRIWEQAFRLNVSNSKKCFDTISGHRITLPTNARGLFTGYDYESKRHRIVIRGYDKFFNIDEVPITTWDALSQHTKGPYELTVKENGCIIFIAALPDGQIIVSSKHSLGIVEGQSVSHANVGERWLEKHLQSVGRTKQELAHELLRRDMTAVAELCDDEFEEHILPYTGNSRGLYLHGLNRNCPQFITASSCEVAEFAEQWGFMKVSSFFMDSIHELKAFLENASKDGKWNNRAIEGFVIRCHSDHSSLEQQSSNDFFFKYKFPEPYGMFRQWREVTKMLISGKKPSYTKYKKVTAEYITFCDKKFKEDEDAKRLYMSNKGIISLRDEFLVLSKLDLMHLSVSNDNDCGKEFTLLVPIATIGCGKTTVAKILEKLFGWPVVQNDNLPSGKGGPKRFAKAIIEEFRNGHSVVFADRNNHISNMRSTLQTDILALIDGVRFVALPFKHTPEVPEFVQNRVLQRGDRHQSIKVSEGVDKVKAIMNTFYKQYKPFDPAGNKHDANYDDIIELDPLIGSLENARRIVNYFKKNIPELIPNDPSDDDYAAALNYAVNEYVPTYRKTFGNDSKKIKNKITAEGITGSSTCFKKAPRYFGVLLDRKTVESSLVQVLTIANLQWQEAFSRYTLQDSFHITMIHESQKPVNSRIWEQYLQHMHDKNTTKMGNISFRITHLVWDDRVICFRVTMNENSVWYGKTCNPQLHITLGTSSSDVKAFESNFLLKKLRWQGDEVDSTDGNVRYLTVLPKIIIEGMLEPVY

Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations	Modification	Substrate Peptides & Secondary Structure	ASA (%)	Reference	Orthologous Protein Cluster
Oops, there are no PTM records of TRNL_SCHPO !!

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)

Modified Location	Modified Residue	Modification	Type of Upstream Proteins	Gene Name of Upstream Proteins	UniProt AC of Upstream Proteins	Sources
Oops, there are no upstream regulatory protein records of TRNL_SCHPO !!

Functions of PTM Sites

Modified Location	Modified Residue	Modification	Function	Reference
Oops, there are no descriptions of PTM sites of TRNL_SCHPO !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location	Modification	Variant Position (Distance <= 10)	Residue Change	SAP	Related Disease	Reference
Oops, there are no SNP-PTM records of TRNL_SCHPO !!

Protein-Protein Interaction

Interacting Protein	Gene Name	Interaction Type	PPI Reference	Domain-Domain Interactions
Oops, there are no PPI records of TRNL_SCHPO !!

Drug and Disease Associations

Kegg Drug
DrugBank
There are no disease associations of PTM sites.

Regulatory Network of TRNL_SCHPO

Related Literatures of Post-Translational Modification