UniProt ID | TNR6B_MOUSE | |
---|---|---|
UniProt AC | Q8BKI2 | |
Protein Name | Trinucleotide repeat-containing gene 6B protein | |
Gene Name | Tnrc6b | |
Organism | Mus musculus (Mouse). | |
Sequence Length | 1810 | |
Subcellular Localization | Cytoplasm, P-body. Mammalian P-bodies are also known as GW bodies (GWBs).. | |
Protein Description | Plays a role in RNA-mediated gene silencing by both micro-RNAs (miRNAs) and short interfering RNAs (siRNAs). Required for miRNA-dependent translational repression and siRNA-dependent endonucleolytic cleavage of complementary mRNAs by argonaute family proteins As scaffoldng protein associates with argonaute proteins bound to partially complementary mRNAs and simultaneously can recruit CCR4-NOT and PAN deadenylase complexes (By similarity).. | |
Protein Sequence | MQTNEGEVEEESSSQVEQEDFVMEGHGKTPPPGEESKQEKEQEREEQLMEDKKRKKEDKKKKEATQKVTEQKTKVPEVTKPSLSQPTAASPIGSSPSPPVNGGNNAKRVAVPNGQPPSAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPCTAPGANPNNNAQVTGALLQSESGTAPESTLGGAAASNYANSTWGPGASSNSGASPNPIHIWDKVIVDGSDMEEWPCIASKDTESSSENTTDNNSASNPGSEKSSLPGSTTSNKGKGSQCQAASSGNECNLGVWKSDPKAKSVQPPNSTSDSNNGLGNWRSTSGQDRIGPGSGFSNFNPNSNPSAWPALVQEGTSRKGALETESSSSSAQVSTVGQASREQQSKMENAGVNFVVSGREQAQIHNTDGPKNGNTNSLNLSSPNPMENKGMPFGMGLGNTSRSTDAPSQSTGDRKTGSVGSWGAARGPSGTDTVSGQSNSGNNGNNGKDREDSWKGASVPKPTGSKSDSWDNNNRSTGGSWNFGPQDNNDNKWGEGNKMTSGVSQGEWKQPTGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNAQAPCWGRSSSSAGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSNTGWGQTQIKQDTVWDIEEVPRPEGKSDKGTEGWESAATQTKNSGGWGDAPSQSNQMKSGWGELSASTEWKDPKSTGGWNDYKNNNSSNWGGGRADEKTPSSWNESSCKDQGWGGGRQPNQGWTSGKNGWGEEVDQVKNNNWESSANKPVSGWGEGGQNEIGTWGNGGNTNLASKGGWEDCKRSPAWNETGRQPNSWNKQHQQQQQPPPPQPEASGSWGGPPPPPQGNVRPSNSNWSSGPQPTTPKDDEPSGWEEPSPQSISRKMDIDDGTSAWGDPNSYNYKNVNLWDKNSQGGPAPREPNLPTPMTGKSASVWSKSTPPAPDNGTSAWGEPNESSPGWGEMDDAGASTTGWGNTPANAPNAMKPNSKSMQDGWGESDGPVTGARHPSWEEEDDGGVWNTAGSQGSTSSHNSASWGQGGKKQMKCSLKGGNNDSWMNPLAKQFSNMGLLSQTEDNPSSKMDLSVDKKFDVDKRTMNLGDFNDIMRKDRPGFRPPNSKDLGTTDSGPYFEKGGSHGLFGNSTAQSRGLHTPVQPLSSSPGLRAQVPPQFISPQVSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQQLLQNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVPNALNVGLPDLPTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQEATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSSNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTTTSPIVDTDHQLLRDNTTGSNSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISSRNTTPLTRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRIASASTWSDGGSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTTILAEFATEDEVSRFLAQAQPPTPAATPSAPATGWQSLETSQNQADPVGPALNLFGGSTGLGQWSSSAGGSSGADLAGTSLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDSI | |
Overview of Protein Modification Sites with Functional and Structural Information | ||
|
* ASA = Accessible Surface Area
Locations | Modification | Substrate Peptides & Secondary Structure |
ASA (%) | Reference | Orthologous Protein Cluster |
---|---|---|---|---|---|
90 | Phosphorylation | LSQPTAASPIGSSPS CCCCCCCCCCCCCCC | 18.00 | 28285833 | |
94 | Phosphorylation | TAASPIGSSPSPPVN CCCCCCCCCCCCCCC | 39.53 | 25338131 | |
95 | Phosphorylation | AASPIGSSPSPPVNG CCCCCCCCCCCCCCC | 24.96 | 28285833 | |
97 | Phosphorylation | SPIGSSPSPPVNGGN CCCCCCCCCCCCCCC | 43.73 | 29514104 | |
232 | Phosphorylation | DKVIVDGSDMEEWPC EEEEECCCCCCCCCE | 29.35 | 26525534 | |
364 | Phosphorylation | SRKGALETESSSSSA CCCCCEECCCCCCCC | 41.85 | 25168779 | |
366 | Phosphorylation | KGALETESSSSSAQV CCCEECCCCCCCCEE | 42.83 | 25168779 | |
367 | Phosphorylation | GALETESSSSSAQVS CCEECCCCCCCCEEE | 28.18 | 25168779 | |
368 | Phosphorylation | ALETESSSSSAQVST CEECCCCCCCCEEEH | 37.28 | 25168779 | |
369 | Phosphorylation | LETESSSSSAQVSTV EECCCCCCCCEEEHH | 31.47 | 25168779 | |
370 | Phosphorylation | ETESSSSSAQVSTVG ECCCCCCCCEEEHHH | 25.35 | 25168779 | |
374 | Phosphorylation | SSSSAQVSTVGQASR CCCCCEEEHHHHHHH | 12.80 | 25168779 | |
375 | Phosphorylation | SSSAQVSTVGQASRE CCCCEEEHHHHHHHH | 29.78 | 25168779 | |
380 | Phosphorylation | VSTVGQASREQQSKM EEHHHHHHHHHHHHH | 28.58 | 25168779 | |
421 | Phosphorylation | NTNSLNLSSPNPMEN CCCCCCCCCCCCCCC | 42.55 | 27087446 | |
422 | Phosphorylation | TNSLNLSSPNPMENK CCCCCCCCCCCCCCC | 31.68 | 25263469 | |
451 | Phosphorylation | TDAPSQSTGDRKTGS CCCCCCCCCCCCCCC | 35.15 | - | |
456 | Phosphorylation | QSTGDRKTGSVGSWG CCCCCCCCCCCCCCC | 35.27 | 28066266 | |
458 | Phosphorylation | TGDRKTGSVGSWGAA CCCCCCCCCCCCCCC | 28.65 | 26643407 | |
461 | Phosphorylation | RKTGSVGSWGAARGP CCCCCCCCCCCCCCC | 21.85 | 28066266 | |
507 | Phosphorylation | PKPTGSKSDSWDNNN CCCCCCCCCCCCCCC | 38.28 | 25338131 | |
509 | Phosphorylation | PTGSKSDSWDNNNRS CCCCCCCCCCCCCCC | 43.34 | 23684622 | |
594 | Glutathionylation | QGNAQAPCWGRSSSS CCCCCCCCCCCCCCC | 7.25 | 24333276 | |
598 | Phosphorylation | QAPCWGRSSSSAGSE CCCCCCCCCCCCCCC | 30.54 | 27087446 | |
599 | Phosphorylation | APCWGRSSSSAGSEV CCCCCCCCCCCCCCC | 27.27 | 27087446 | |
600 | Phosphorylation | PCWGRSSSSAGSEVG CCCCCCCCCCCCCCC | 26.00 | 30352176 | |
601 | Phosphorylation | CWGRSSSSAGSEVGG CCCCCCCCCCCCCCC | 38.30 | 30372032 | |
604 | Phosphorylation | RSSSSAGSEVGGQST CCCCCCCCCCCCCCC | 28.91 | 27087446 | |
610 | Phosphorylation | GSEVGGQSTGSNHKA CCCCCCCCCCCCCCC | 37.70 | 25195567 | |
611 | Phosphorylation | SEVGGQSTGSNHKAG CCCCCCCCCCCCCCC | 36.42 | 29899451 | |
613 | Phosphorylation | VGGQSTGSNHKAGSS CCCCCCCCCCCCCCC | 35.53 | 23684622 | |
648 | Phosphorylation | LQTLLSRTDLDPRVL HHHHHHCCCCCHHHH | 37.22 | 28059163 | |
758 | Phosphorylation | ADEKTPSSWNESSCK CCCCCCCCCCHHHCC | 34.81 | 23684622 | |
840 | Phosphorylation | GWEDCKRSPAWNETG CHHHHCCCCCCCCCC | 12.40 | 23684622 | |
899 | Phosphorylation | WSSGPQPTTPKDDEP CCCCCCCCCCCCCCC | 50.94 | 25338131 | |
907 | Phosphorylation | TPKDDEPSGWEEPSP CCCCCCCCCCCCCCC | 55.26 | 25619855 | |
913 | Phosphorylation | PSGWEEPSPQSISRK CCCCCCCCCHHHCCC | 38.56 | 25521595 | |
916 | Phosphorylation | WEEPSPQSISRKMDI CCCCCCHHHCCCCCC | 26.39 | 25619855 | |
918 | Phosphorylation | EPSPQSISRKMDIDD CCCCHHHCCCCCCCC | 30.97 | 25619855 | |
1026 | Phosphorylation | AMKPNSKSMQDGWGE CCCCCCCCCCCCCCC | 22.84 | 25338131 | |
1034 | Phosphorylation | MQDGWGESDGPVTGA CCCCCCCCCCCCCCC | 43.88 | 26525534 | |
1039 | Phosphorylation | GESDGPVTGARHPSW CCCCCCCCCCCCCCC | 28.40 | - | |
1045 | Phosphorylation | VTGARHPSWEEEDDG CCCCCCCCCCCCCCC | 40.78 | 23684622 | |
1101 | Phosphorylation | NPLAKQFSNMGLLSQ HHHHHHHCCCCCCCC | 24.34 | 26643407 | |
1161 | Phosphorylation | KDLGTTDSGPYFEKG CCCCCCCCCCCCCCC | 39.31 | 25367039 | |
1164 | Phosphorylation | GTTDSGPYFEKGGSH CCCCCCCCCCCCCCC | 28.09 | 18563927 | |
1192 | Phosphorylation | HTPVQPLSSSPGLRA CCCCCCCCCCCCHHH | 35.14 | 26643407 | |
1193 | Phosphorylation | TPVQPLSSSPGLRAQ CCCCCCCCCCCHHHC | 48.51 | 25266776 | |
1194 | Phosphorylation | PVQPLSSSPGLRAQV CCCCCCCCCCHHHCC | 21.44 | 26643407 | |
1276 | Phosphorylation | LQNQRKISQAVRQQQ HHHHHHHHHHHHHHH | 18.34 | - | |
1292 | Phosphorylation | QQLARMVSALQQQQQ HHHHHHHHHHHHHHH | 17.58 | 25338131 | |
1313 | Phosphorylation | RQPSMKHSPSHPVGP HCHHHHCCCCCCCCC | 23.68 | 28418008 | |
1315 | Phosphorylation | PSMKHSPSHPVGPKP HHHHCCCCCCCCCCC | 43.36 | 28066266 | |
1405 | Phosphorylation | AIVAPGKTRGGSPYN CEECCCCCCCCCCCC | 40.22 | 26745281 | |
1409 | Phosphorylation | PGKTRGGSPYNQFDI CCCCCCCCCCCCCCC | 27.34 | 21082442 | |
1411 | Phosphorylation | KTRGGSPYNQFDIIP CCCCCCCCCCCCCCC | 24.24 | 21082442 | |
1421 | Phosphorylation | FDIIPGDTLGGHTGP CCCCCCCCCCCCCCC | 32.97 | 25159016 | |
1426 | Phosphorylation | GDTLGGHTGPAGDSW CCCCCCCCCCCCCCC | 48.40 | 25159016 | |
1432 | Phosphorylation | HTGPAGDSWLPAKSP CCCCCCCCCCCCCCC | 29.60 | 25159016 | |
1438 | Phosphorylation | DSWLPAKSPPTNKIG CCCCCCCCCCCCCCC | 37.91 | 22942356 | |
1441 | Phosphorylation | LPAKSPPTNKIGSKS CCCCCCCCCCCCCCC | 53.15 | 26160508 | |
1446 | Phosphorylation | PPTNKIGSKSSNASW CCCCCCCCCCCCCCC | 32.60 | - | |
1473 | Phosphorylation | IQNIDPESDPYVTPG CCCCCCCCCCCCCCC | 49.64 | 29472430 | |
1476 | Phosphorylation | IDPESDPYVTPGSVL CCCCCCCCCCCCCCC | 23.19 | 29472430 | |
1478 | Phosphorylation | PESDPYVTPGSVLGG CCCCCCCCCCCCCCC | 18.98 | 26643407 | |
1481 | Phosphorylation | DPYVTPGSVLGGTTT CCCCCCCCCCCCCCC | 18.51 | 26643407 | |
1486 | Phosphorylation | PGSVLGGTTTSPIVD CCCCCCCCCCCCCCC | 25.71 | 26643407 | |
1487 | Phosphorylation | GSVLGGTTTSPIVDT CCCCCCCCCCCCCCC | 28.66 | 26643407 | |
1488 | Phosphorylation | SVLGGTTTSPIVDTD CCCCCCCCCCCCCCC | 32.13 | 26643407 | |
1489 | Phosphorylation | VLGGTTTSPIVDTDH CCCCCCCCCCCCCCC | 15.55 | 26643407 | |
1494 | Phosphorylation | TTSPIVDTDHQLLRD CCCCCCCCCCHHHCC | 25.20 | 26643407 | |
1503 | Phosphorylation | HQLLRDNTTGSNSSL CHHHCCCCCCCCCCC | 36.50 | 29472430 | |
1504 | Phosphorylation | QLLRDNTTGSNSSLN HHHCCCCCCCCCCCC | 44.88 | 29472430 | |
1506 | Phosphorylation | LRDNTTGSNSSLNTS HCCCCCCCCCCCCCC | 31.29 | 29472430 | |
1508 | Phosphorylation | DNTTGSNSSLNTSLP CCCCCCCCCCCCCCC | 37.59 | 29472430 | |
1509 | Phosphorylation | NTTGSNSSLNTSLPS CCCCCCCCCCCCCCC | 29.86 | 29472430 | |
1512 | Phosphorylation | GSNSSLNTSLPSPGA CCCCCCCCCCCCCCC | 36.61 | 29472430 | |
1513 | Phosphorylation | SNSSLNTSLPSPGAW CCCCCCCCCCCCCCC | 36.89 | 29472430 | |
1516 | Phosphorylation | SLNTSLPSPGAWPYS CCCCCCCCCCCCCCC | 41.06 | 29472430 | |
1522 | Phosphorylation | PSPGAWPYSASDNSF CCCCCCCCCCCCCCC | 13.23 | 29472430 | |
1523 | Phosphorylation | SPGAWPYSASDNSFT CCCCCCCCCCCCCCC | 19.74 | 29472430 | |
1544 | Phosphorylation | AKFPDYKSTWSPDPI CCCCCCCCCCCCCCC | 28.95 | 26643407 | |
1545 | Phosphorylation | KFPDYKSTWSPDPIG CCCCCCCCCCCCCCC | 26.30 | 26643407 | |
1547 | Phosphorylation | PDYKSTWSPDPIGHN CCCCCCCCCCCCCCC | 21.36 | 25266776 | |
1589 | Phosphorylation | LTNPKPASPWSSTAP CCCCCCCCCCCCCCC | 35.11 | 28066266 | |
1592 | Phosphorylation | PKPASPWSSTAPRSV CCCCCCCCCCCCCCC | 22.61 | 26643407 | |
1793 | Phosphorylation | EDPHRMGSPAPLLPG CCCCCCCCCCCCCCC | 14.46 | 26824392 | |
1807 | Phosphorylation | GDLLGGGSDSI---- CCCCCCCCCCC---- | 31.31 | 25159016 | |
1809 | Phosphorylation | LLGGGSDSI------ CCCCCCCCC------ | 31.71 | 25159016 |
Modified Location | Modified Residue | Modification | Type of Upstream Proteins | Gene Name of Upstream Proteins | UniProt AC of Upstream Proteins | Sources |
---|---|---|---|---|---|---|
Oops, there are no upstream regulatory protein records of TNR6B_MOUSE !! |
Modified Location | Modified Residue | Modification | Function | Reference | ||
---|---|---|---|---|---|---|
Oops, there are no descriptions of PTM sites of TNR6B_MOUSE !! |
* Distance = the distance between SAP position and PTM sites.
Modified Location | Modification | Variant Position (Distance <= 10) |
Residue Change | SAP | Related Disease | Reference |
---|---|---|---|---|---|---|
Oops, there are no SNP-PTM records of TNR6B_MOUSE !! |
Interacting Protein | Gene Name | Interaction Type | PPI Reference | Domain-Domain Interactions |
---|---|---|---|---|
AGO2_MOUSE | Ago2 | physical | 19838187 |
Kegg Drug | ||||||
---|---|---|---|---|---|---|
DrugBank | ||||||
There are no disease associations of PTM sites. |
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