SYFB_MOUSE - dbPTM
SYFB_MOUSE - PTM Information in dbPTM
Basic Information of Protein
UniProt ID SYFB_MOUSE
UniProt AC Q9WUA2
Protein Name Phenylalanine--tRNA ligase beta subunit
Gene Name Farsb
Organism Mus musculus (Mouse).
Sequence Length 589
Subcellular Localization Cytoplasm.
Protein Description
Protein Sequence MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKQIISKEQGHGKAQGASDVVLYKIDVPANRYDLLCLEGLARGLQVFKERIKAPVYKRVMPKGDIQKLVITEETAKVRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIESKPLYPVIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEHCENQFTVEAVEVVSPNGKSSTFPELPYRKEMVRADLINKKVGIRETPANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDVVVKDSGKDVGAKNYRHLCAVYYNKTPGFEIIHGLLDRIMQLLDVPPGEESGGYMIKASAGSAFFPGRCAEIFVGGQSIGKLGVLHPDVITKFELTMPCSSLEINIEPFL
Overview of Protein Modification Sites with Functional and Structural Information
Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations Modification Substrate Peptides
&
Secondary Structure		 ASA (%) Reference Orthologous
Protein Cluster
7Acetylation-MPTVSVKRDLLFQA
-CCCCCCCHHHHHHH		32.466569191
53UbiquitinationSKEQGHGKAQGASDV
CCCCCCCCCCCCCCE		31.68-
53MalonylationSKEQGHGKAQGASDV
CCCCCCCCCCCCCCE		31.6826320211
58PhosphorylationHGKAQGASDVVLYKI
CCCCCCCCCEEEEEE		37.45-
63PhosphorylationGASDVVLYKIDVPAN
CCCCEEEEEEECCCC		8.35-
64AcetylationASDVVLYKIDVPANR
CCCEEEEEEECCCCH		28.4123864654
76S-palmitoylationANRYDLLCLEGLARG
CCHHHHHHHHHHHHH		4.1728526873
88SuccinylationARGLQVFKERIKAPV
HHHHHHHHHHHCCCH		47.4223954790
88MalonylationARGLQVFKERIKAPV
HHHHHHHHHHHCCCH		47.4226320211
96PhosphorylationERIKAPVYKRVMPKG
HHHCCCHHHCCCCCC		7.63-
102MalonylationVYKRVMPKGDIQKLV
HHHCCCCCCCCEEEE		51.6326320211
107AcetylationMPKGDIQKLVITEET
CCCCCCEEEEEECCC		45.0923954790
133AcetylationLRNIKFTKDRYDSFI
HHHCCCCHHHHHHHH		43.2623201123
190MalonylationFKPLNKTKEYTACEL
CCCCCCCCCEEHHHH		50.7826320211
190AcetylationFKPLNKTKEYTACEL
CCCCCCCCCEEHHHH		50.7822826441
192PhosphorylationPLNKTKEYTACELMN
CCCCCCCEEHHHHEE		10.95-
195S-palmitoylationKTKEYTACELMNIYK
CCCCEEHHHHEEEEE		2.9628526873
262AcetylationCTGTDFTKAKIVLDI
EECCCHHHHHHHHHH		47.9122826441
316MalonylationVRADLINKKVGIRET
HHHHHHCCCCCCCCC		41.6726320211
362GlutathionylationRADVIHACDIVEDAA
CCCHHHHCHHHHHHH		1.9624333276
395UbiquitinationANQFPLNKLTELLRL
CCCCCHHHHHHHHHH		65.55-
443MalonylationAVHISNPKTAEFQVA
EEEECCCCCHHHHHH		65.7026320211
443UbiquitinationAVHISNPKTAEFQVA
EEEECCCCCHHHHHH		65.70-
452PhosphorylationAEFQVARTTLLPGLL
HHHHHHHHHCHHHHH		16.4424759943
467MalonylationKTIAANRKMPLPLKL
HHHHHCCCCCCCEEE		44.6826320211
467UbiquitinationKTIAANRKMPLPLKL
HHHHHCCCCCCCEEE		44.68-
485PhosphorylationSDVVVKDSGKDVGAK
ECEEEECCCCCCCCC		41.8623984901
Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)
Modified Location Modified Residue Modification Type of Upstream Proteins Gene Name of Upstream Proteins UniProt AC of Upstream Proteins Sources

Oops, there are no upstream regulatory protein records of SYFB_MOUSE !!
Functions of PTM Sites
Modified Location Modified Residue Modification Function Reference

Oops, there are no descriptions of PTM sites of SYFB_MOUSE !!
Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location Modification Variant Position
(Distance <= 10) 		Residue Change SAP Related Disease Reference

Oops, there are no SNP-PTM records of SYFB_MOUSE !!
Protein-Protein Interaction
Interacting Protein Gene Name Interaction Type PPI Reference Domain-Domain Interactions

Oops, there are no PPI records of SYFB_MOUSE !!
Drug and Disease Associations
Kegg Drug
DrugBank
There are no disease associations of PTM sites.
Regulatory Network of SYFB_MOUSE

loading...

Related Literatures of Post-Translational Modification

TOP
© 2024 Institute of Bioinformatics and Systems Biology, NYCU | Designed by : BiOmics Laboratory