| UniProt ID | RS40_ARATH | |
|---|---|---|
| UniProt AC | P92965 | |
| Protein Name | Serine/arginine-rich splicing factor RS40 | |
| Gene Name | RS40 | |
| Organism | Arabidopsis thaliana (Mouse-ear cress). | |
| Sequence Length | 350 | |
| Subcellular Localization | Nucleus . Nucleus speckle . | |
| Protein Description | Required for constitutive and alternative pre-mRNA splicing (Probable). Involved in primary miRNA processing and pri-miRNA biogenesis. Binds both intronless and intron-containing pri-miRNAs. [PubMed: 26227967] | |
| Protein Sequence | MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSPPADE | |
| Overview of Protein Modification Sites with Functional and Structural Information | ||
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* ASA = Accessible Surface Area
| Locations | Modification | Substrate Peptides & Secondary Structure |
ASA (%) | Reference | Orthologous Protein Cluster |
|---|---|---|---|---|---|
| 89 | Phosphorylation | SGGGSRRSSSSMRPS CCCCCCCCCCCCCCC | 25561503 | ||
| 151 | Phosphorylation | ATRALDASNNSKLMD HHHHHHCCCCHHHHH | 22074104 | ||
| 154 | Phosphorylation | ALDASNNSKLMDKVI HHHCCCCHHHHHHEE | 22074104 | ||
| 162 | Phosphorylation | KLMDKVISVEYAVKD HHHHHEEEEEEEECC | 19880383 | ||
| 178 | Phosphorylation | DARGNGHSPERRRDR CCCCCCCCHHHHHCC | 29654922 | ||
| 193 | Phosphorylation | SPERRRRSPSPYKRE CHHHHHCCCCCCCCC | 23111157 | ||
| 195 | Phosphorylation | ERRRRSPSPYKRERG HHHHCCCCCCCCCCC | 23111157 | ||
| 197 | Phosphorylation | RRRSPSPYKRERGSP HHCCCCCCCCCCCCC | 30407730 | ||
| 203 | Phosphorylation | PYKRERGSPDYGRGA CCCCCCCCCCCCCCC | 19880383 | ||
| 206 | Phosphorylation | RERGSPDYGRGASPV CCCCCCCCCCCCCHH | 23776212 | ||
| 211 | Phosphorylation | PDYGRGASPVAAYRK CCCCCCCCHHHHHHC | 19880383 | ||
| 216 | Phosphorylation | GASPVAAYRKERTSP CCCHHHHHHCCCCCC | 23776212 | ||
| 221 | Phosphorylation | AAYRKERTSPDYGRR HHHHCCCCCCCCCCC | 23776212 | ||
| 222 | Phosphorylation | AYRKERTSPDYGRRR HHHCCCCCCCCCCCC | 23776212 | ||
| 225 | Phosphorylation | KERTSPDYGRRRSPS CCCCCCCCCCCCCCC | 23776212 | ||
| 230 | Phosphorylation | PDYGRRRSPSPYKKS CCCCCCCCCCCCCCC | 19880383 | ||
| 232 | Phosphorylation | YGRRRSPSPYKKSRR CCCCCCCCCCCCCCC | 30407730 | ||
| 234 | Phosphorylation | RRRSPSPYKKSRRGS CCCCCCCCCCCCCCC | 30407730 | ||
| 241 | Phosphorylation | YKKSRRGSPEYGRDR CCCCCCCCCCCCCCC | 23776212 | ||
| 244 | Phosphorylation | SRRGSPEYGRDRRGN CCCCCCCCCCCCCCC | 23776212 | ||
| 262 | Phosphorylation | RRRERVASPTKYSRS CHHHHCCCCCCCCCC | 23776212 | ||
| 264 | Phosphorylation | RERVASPTKYSRSPN HHHCCCCCCCCCCCC | 23776212 | ||
| 266 | Phosphorylation | RVASPTKYSRSPNNK HCCCCCCCCCCCCCC | 23776212 | ||
| 267 | Phosphorylation | VASPTKYSRSPNNKR CCCCCCCCCCCCCCC | 23776212 | ||
| 278 | Phosphorylation | NNKRERMSPNHSPFK CCCCCCCCCCCCCCC | 23776212 | ||
| 282 | Phosphorylation | ERMSPNHSPFKKESP CCCCCCCCCCCCCCC | 23776212 | ||
| 288 | Phosphorylation | HSPFKKESPRNGVGE CCCCCCCCCCCCCCC | 23776212 | ||
| 298 | Phosphorylation | NGVGEVESPIERRER CCCCCCCCHHHHHHH | 30291188 | ||
| 306 | Phosphorylation | PIERRERSRSSPENG HHHHHHHHCCCCCCC | 23776212 | ||
| 308 | Phosphorylation | ERRERSRSSPENGQV HHHHHHCCCCCCCCC | 23776212 | ||
| 309 | Phosphorylation | RRERSRSSPENGQVE HHHHHCCCCCCCCCC | 23776212 | ||
| 317 | Phosphorylation | PENGQVESPGSIGRR CCCCCCCCCCCCCCC | 23776212 | ||
| 320 | Phosphorylation | GQVESPGSIGRRDSD CCCCCCCCCCCCCCC | 23776212 | ||
| 326 | Phosphorylation | GSIGRRDSDGGYDGA CCCCCCCCCCCCCCC | 23776212 | ||
| 330 | Phosphorylation | RRDSDGGYDGAESPM CCCCCCCCCCCCCCC | 23776212 | ||
| 335 | Phosphorylation | GGYDGAESPMQKSRS CCCCCCCCCCCCCCC | 30291188 | ||
| 340 | Phosphorylation | AESPMQKSRSPRSPP CCCCCCCCCCCCCCC | 23776212 | ||
| 342 | Phosphorylation | SPMQKSRSPRSPPAD CCCCCCCCCCCCCCC | 23776212 | ||
| 345 | Phosphorylation | QKSRSPRSPPADE-- CCCCCCCCCCCCC-- | 23776212 |
| Modified Location | Modified Residue | Modification | Type of Upstream Proteins | Gene Name of Upstream Proteins | UniProt AC of Upstream Proteins | Sources |
|---|---|---|---|---|---|---|
Oops, there are no upstream regulatory protein records of RS40_ARATH !! | ||||||
| Modified Location | Modified Residue | Modification | Function | Reference | ||
|---|---|---|---|---|---|---|
Oops, there are no descriptions of PTM sites of RS40_ARATH !! | ||||||
* Distance = the distance between SAP position and PTM sites.
| Modified Location | Modification | Variant Position (Distance <= 10) |
Residue Change | SAP | Related Disease | Reference |
|---|---|---|---|---|---|---|
Oops, there are no SNP-PTM records of RS40_ARATH !! | ||||||
| Interacting Protein | Gene Name | Interaction Type | PPI Reference | Domain-Domain Interactions |
|---|---|---|---|---|
Oops, there are no PPI records of RS40_ARATH !! | ||||
| Kegg Drug | ||||||
|---|---|---|---|---|---|---|
| DrugBank | ||||||
| There are no disease associations of PTM sites. | ||||||
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