dbPTM

RRFC_ARATH - PTM Information in dbPTM

Basic Information of Protein

Overview of Protein Modification Sites with Functional and Structural Information
UniProt ID	RRFC_ARATH
UniProt AC	Q9M1X0
Protein Name	Ribosome-recycling factor, chloroplastic
Gene Name	RRF
Organism	Arabidopsis thaliana (Mouse-ear cress).
Sequence Length	275
Subcellular Localization	Plastid, chloroplast.
Protein Description	Responsible for the release of ribosomes from messenger RNA at the termination of chloroplastic protein biosynthesis..
Protein Sequence	MAASFSSTAPTTPVLRFRANYSKPLLSLPDSCLRIISSAISPSTRLIACSFKTDKLPLGAGVNLSGGPVVKRSLQKRLVIRSATIEEIEAEKSAIETDVKSKMEKTIETLRTSFNSIRTGRSNAAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLLQPYDKSSLKAIEKAIVNSDLGVTPNNDGDVIRLSLPPLTSDRRKELSKVVAKQSEEGKVALRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDVYMKKIEELYKQKEKELMKV

Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations	Modification	Substrate Peptides & Secondary Structure	ASA (%)	Reference
37	Phosphorylation	DSCLRIISSAISPST HHHHHHHHHCCCCCC	16.02	19880383
38	Phosphorylation	SCLRIISSAISPSTR HHHHHHHHCCCCCCE	21.15	19880383
101	Phosphorylation	AIETDVKSKMEKTIE HHHHHHHHHHHHHHH	36.76	25561503
196	Phosphorylation	RLSLPPLTSDRRKEL EEECCCCCCHHHHHH	34.06	25561503
197	Phosphorylation	LSLPPLTSDRRKELS EECCCCCCHHHHHHH	36.48	25561503
239	Phosphorylation	LEKEKKLSEDNVKDL HHHHHCCCCCHHHHH	52.35	22092075
258	Sulfoxidation	QKLIDVYMKKIEELY HHHHHHHHHHHHHHH	3.42	25693801

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)

Modified Location	Modified Residue	Modification	Type of Upstream Proteins	Gene Name of Upstream Proteins	UniProt AC of Upstream Proteins	Sources
Oops, there are no upstream regulatory protein records of RRFC_ARATH !!

Functions of PTM Sites

Modified Location	Modified Residue	Modification	Function	Reference
Oops, there are no descriptions of PTM sites of RRFC_ARATH !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location	Modification	Variant Position (Distance <= 10)	Residue Change	SAP	Related Disease	Reference
Oops, there are no SNP-PTM records of RRFC_ARATH !!

Protein-Protein Interaction

Interacting Protein	Gene Name	Interaction Type	PPI Reference	Domain-Domain Interactions
Oops, there are no PPI records of RRFC_ARATH !!

Drug and Disease Associations

Kegg Drug
DrugBank
There are no disease associations of PTM sites.

Regulatory Network of RRFC_ARATH

Related Literatures of Post-Translational Modification