dbPTM

ALF4_ARATH - PTM Information in dbPTM

Basic Information of Protein

Overview of Protein Modification Sites with Functional and Structural Information
UniProt ID	ALF4_ARATH
UniProt AC	Q84VX3
Protein Name	Aberrant root formation protein 4
Gene Name	ALF4
Organism	Arabidopsis thaliana (Mouse-ear cress).
Sequence Length	626
Subcellular Localization	Nucleus .
Protein Description	Required for the initiation of lateral roots independent from auxin signaling. May function in maintaining the pericycle in the mitotically competent state needed for lateral root formation..
Protein Sequence	MVKFAIINTLTVNETWAKLKSFGVMESSIEGSSESTTVTTSPSRRVRELLALCFSSVEEAGGFQDFESFVTELVSCLDSLYENVALDANNELENDVIEEVLDEILKVLSSPQMDQDVIDALSFHLPKVTSKFADISSRCLQLVEEIVDRFVEACNPRDMLSILCEALDAARCYHSASTCSTPLLHGLSKVFILIQRRHYEQLKVAVPIVLNVLKDISLETDVQVEDLFDKALGIASSIRDVSSKLNNEEEAKVRCLLCLYVIQITAIISVSIRDKAASCIPLVIQLEPFLTSCGLTHLGLITGNDTEKLMSTVAGDDDEFITSFPDISLGASLLFICAKISHEVAEAANAVLGSVVDELQNNPVKRWQAYGMLKYILSSGDLLWEFKRHAIEFLLDITKGVTSSQCNDEQIDCSDYTPGIYATLQAVTLLIMYAPDADLRKKTFEALKRVLSDIPAPHRFDVLRALVTNSRSPSMTAILLGLVKDSMSKSSLQDTDCAAVDTHVIELVELVLRPPQGGPPLLPDQSDAILAALNLYRFALLFESRECEAGKERSKVGSDILSKKNLEKAYKEWLLPLRTLVSCSIAENLKEDHGQESSLDDVGLLNPIELVLYRCIELVEEKLKSH

Experimental Post-Translational Modification Sites

* ASA = Accessible Surface Area

Locations	Modification	Substrate Peptides & Secondary Structure	ASA (%)	Reference	Orthologous Protein Cluster
Oops, there are no PTM records of ALF4_ARATH !!

Upstream regulatory proteins (kinases for phosphorylation sites, E3 ubiquitin ligases of ubiquitination sites, ...)

Modified Location	Modified Residue	Modification	Type of Upstream Proteins	Gene Name of Upstream Proteins	UniProt AC of Upstream Proteins	Sources
Oops, there are no upstream regulatory protein records of ALF4_ARATH !!

Functions of PTM Sites

Modified Location	Modified Residue	Modification	Function	Reference
Oops, there are no descriptions of PTM sites of ALF4_ARATH !!

Disease-associated PTM Sites based on SAP

* Distance = the distance between SAP position and PTM sites.

Modified Location	Modification	Variant Position (Distance <= 10)	Residue Change	SAP	Related Disease	Reference
Oops, there are no SNP-PTM records of ALF4_ARATH !!

Protein-Protein Interaction

Interacting Protein	Gene Name	Interaction Type	PPI Reference	Domain-Domain Interactions

Drug and Disease Associations

Kegg Drug
DrugBank
There are no disease associations of PTM sites.

Regulatory Network of ALF4_ARATH

Related Literatures of Post-Translational Modification