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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

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Protein Name: Nuclear RNA export factor 1

UniprotKB/SwissProt ID: Q9UBU9 (Q9UBU9)

Gene Name: NXF1

Organism: Homo sapiens (Human)

Function: Involved in the nuclear export of mRNA species bearing retroviral constitutive transport elements (CTE) and in the export of mRNA from the nucleus to the cytoplasm (TAP/NFX1 pathway) (PubMed:10924507). The NXF1-NXT1 heterodimer is involved in the export of HSP70 mRNA in conjunction with ALYREF/THOC4 and THOC5 components of the TREX complex (PubMed:18364396, PubMed:19165146, PubMed:9660949). ALYREF/THOC4-bound mRNA is thought to be transferred to the NXF1-NXT1 heterodimer for export (PubMed:18364396, PubMed:19165146, PubMed:9660949). Also involved in nuclear export of m6A-containing mRNAs: interaction between SRSF3 and YTHDC1 facilitates m6A-containing mRNA-binding to both SRSF3 and NXF1, promoting mRNA nuclear export (PubMed:28984244)

Other Modifications: View all modification sites in dbPTM

Protein Subcellular Localization: Nucleus. Nucleus, nucleoplasm. Nucleus speckle. Nucleus, nuclear pore complex. Nucleus envelope. Cytoplasm. Cytoplasm, Stress granule

Graphical Visualization of S-nitrosylation Sites:
InterPro ID Domain Name
IPR001611 Leu-rich_rpt
IPR032675 LRR_dom_sf
IPR032710 NTF2-like_dom_sf
IPR002075 NTF2_dom
IPR018222 Nuclear_transport_factor_2_euk
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR030217 NXF_fam
IPR035979 RBD_domain_sf
IPR005637 TAP_C_dom
IPR015245 Tap_RNA-bd
IPR009060 UBA-like_sf

The S-nitrosylation sites of Q9UBU9

No. Position S-nitrosylated Peptide Secondary Structure of S-nitrosylated Peptide Solvent Accessibility of nitrosylated Site PubMed ID
1 143 AWLLSMIQSK C SVPFTPIEFH  CCCCCCCCCC C CCCCCCCCHH  6.33% 24105792
2 252 NIDVVLNRRS C MAATLRIIEE  CCCCCCCCCC C CCCCCCCCHH  1.72%
3 328 EELWLDGNSL C DTFRDQSTYI  CCCCCCCCCC C CCCCCCCCHH  4.68%
4 373 DVEAPTTLPP C KGSYFGTENL  CCCCCCCCCC C CCCCCCCCHH  8.02%
5 528 IAVPASNSGL C IVNDELFVRN  CCCCCCCCCC C CCCCCCCCHH  3.58%
6 588 SGMNLEWSQK C LQDNNWDYTR  CCCCCCCCCC C CCCCCCCCHH  2.98%