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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

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Protein Name: Gem-associated protein 5

UniprotKB/SwissProt ID: Q8TEQ6 (Q8TEQ6)

Gene Name: GEMIN5

Organism: Homo sapiens (Human)

Function: The SMN complex catalyzes the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome, and thereby plays an important role in the splicing of cellular pre-mRNAs (PubMed:16857593, PubMed:18984161, PubMed:20513430, PubMed:33963192). Most spliceosomal snRNPs contain a common set of Sm proteins SNRPB, SNRPD1, SNRPD2, SNRPD3, SNRPE, SNRPF and SNRPG that assemble in a heptameric protein ring on the Sm site of the small nuclear RNA to form the core snRNP (Sm core). In the cytosol, the Sm proteins SNRPD1, SNRPD2, SNRPE, SNRPF and SNRPG are trapped in an inactive 6S pICln-Sm complex by the chaperone CLNS1A that controls the assembly of the core snRNP (PubMed:18984161). To assemble core snRNPs, the SMN complex accepts the trapped 5Sm proteins from CLNS1A forming an intermediate (PubMed:18984161). Binding of snRNA inside 5Sm ultimately triggers eviction of the SMN complex, thereby allowing binding of SNRPD3 and SNRPB to complete assembly of the core snRNP. Within the SMN complex, GEMIN5 recognizes and delivers the small nuclear RNAs (snRNAs) to the SMN complex (PubMed:11714716, PubMed:16314521, PubMed:16857593, PubMed:19377484, PubMed:19750007, PubMed:20513430, PubMed:27834343, PubMed:27881600, PubMed:27881601). Binds to the 7-methylguanosine cap of RNA molecules (PubMed:19750007, PubMed:27834343, PubMed:27881600, PubMed:27881601, Ref.27). Binds to the 3'-UTR of SMN1 mRNA and regulates its translation; does not affect mRNA stability (PubMed:25911097). May play a role in the regulation of protein synthesis via its interaction with ribosomes (PubMed:27507887)

Other Modifications: View all modification sites in dbPTM

Protein Subcellular Localization: Nucleus, nucleoplasm. Nucleus, gem. Cytoplasm

Graphical Visualization of S-nitrosylation Sites:
InterPro ID Domain Name
IPR056432 Beta-prop_GEMI5_1st
IPR056424 Beta-prop_GEMI5_2nd
IPR020472 G-protein_beta_WD-40_rep
IPR056420 GEMI5_RBS
IPR052640 Gemin-5
IPR011047 Quinoprotein_ADH-like_sf
IPR056421 TPR_GEMI5
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR019775 WD40_repeat_CS
IPR036322 WD40_repeat_dom_sf
IPR001680 WD40_rpt

The S-nitrosylation sites of Q8TEQ6

No. Position S-nitrosylated Peptide Secondary Structure of S-nitrosylated Peptide Solvent Accessibility of nitrosylated Site PubMed ID
1 1045 RDGHYAVAAK C YLGATCAYDA   
2 1051 VAAKCYLGAT C AYDAAKVLAK   
3 1091 DELSASLALR C AQELLLANNW   
4 1415 EPEVEAEQPL C SSQSQCKEEK   
5 1421 EQPLCSSQSQ C KEEKNEPLSL   
6 1477 LLLIRSHFPG C LAQEMQQQAQ   
7 19 PPSPNWYCAR C SDAVPGGLFG   
8 240 AVAQAPVTKG C YLATGSKDQT   
9 256 SKDQTIRIWS C SRGRGVMILK   
10 341 QNHSRIVFNL C PLQTEDDKQL   
11 441 ALCWHPTKEG C LAFGTDDGKV   
12 676 VWDALREEPL C NFRGHRGRLL   
13 793 EEQAREPELP C GLAPAVSREP   
14 806 APAVSREPVI C TPVSSGFEKS   
15 973 WAVEAFAKQL C FQDQYVKAAS